Information report for OsUBP6
Gene Details
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Functional Descriptions
- We also examined how knock-out of OsUBP6 affects developmental growth of rice plants.
- Although homozygous T3 OsUBP6 T-DNA insertion mutant seedlings displayed slower growth relative to wild type seedlings, mature mutant plants appeared to be normal.
Literature and News
Gene Resources
- UniProt: Q5JK78
- EMBL: AK066233, AP014957
- AlphaFoldDB: Q5JK78
- EnsemblPlants: Os01t0550100-01, Os01t0550100-02
- Gramene: Os01t0550100-01, Os01t0550100-02
- KEGG: osa:4326194
- Orthologous matrix: FKSDAEY
- InterPro: IPR000626, IPR001394, IPR018200
- PANTHER: PTHR43982, PTHR43982:SF1
- SUPFAM: SSF54001, SSF54236
- PROSITE: PS00972, PS00973, PS50053
- Gene3D: 3.10.20.90, 3.90.70.10
- OrthoDB: Q5JK78
- SWISS-MODEL: Q5JK78
- Conserved Domain Database: cd02657, cd16104
- eggNOG: KOG1872
Homologs
- Arabidopsis thaliana: AT3G21280
- Brachypodium distachyon: BRADI_1g07717v3
- Brassica oleracea: Bol019508
- Glycine max: Glyma.14G132500
- Gossypium hirsutum: Gohir.D13G185401, Gohir.A13G181900
- Juglans regia: Jr11_28260, Jr11_28270
- Zea mays: GRMZM2G154621
Sequences
cDNA Sequence
- >LOC_Os01g36930.1
GTCGCCCTCGTAGTACTATTTCGCTTCGCCTCTCCTCTCTACCTCCGTCGCCGTCCGGTTCCTTTCTCTTCCTCCAAGTAAACTCGGTCTCCGCCGCCTCCTCCGCCGCCGCGCCGCCGATTCGCAGCCATGCCGACCGTAAGCGTGAAATGGCAGAAGGAGACCTTCCCAGGCATAGAGATAGACACCAGCCAGCCGCCTGTTGTCTTTAAGACCCAGCTATACACTCTGACTGGTGTACCACCTGAAAGGCAAAAAATTATGGTGAAGGGTGGAATATTGAAGGATGATGCAGATTGGTCTACTTTGGGAGTGAAAGATGGTCAAAAATTGATGATGATAGGTACAGCTGATGAGATTGTGAAAGCTCCAGAGAAAGGACCAGTATTTGTAGAGGATCTACCAGAAGAAGAGCAAGTGGTTGCACTGGGACACAGTGCTGGTCTTTATAACTTGGGGAATACATGTTACATGAATTCCACTTTGCAGTGCCTGCATTCTGTTCCAGAGCTGAAGTCAGCTTTATTGAGTTATTCAGATAATGTGAGGGGTAATGGTGTTGACCAAGCCTCCCATAATTTGACTGTTGCAACTCGTAATACTTTCGGAGAGCTTGATCAAAGTGTTCGGCCTGTTGCACCTCTACTCTTCTTACAGACGCTGCGTAAAAAGTATCCCCAGTTTGCGCAACAACAAAATAATGTTTATATGCAACAGGATGCAGAAGAATGCTGGACCCAATTGGTGTATACACTTTCTCAAACTCTTACATCAGAAACAAGTGAACCTCCTGCTGGTCAAATGAAGGAACTTTTTGGGATTGATCTCGTGAGCAGGGTCCATTGTGCAGAAAGTGGTGAAGAGAGTTTAGAGAGAGAATCAGTTTATTCTTTGAAGTGTCATATATCTCATGATGTAAACCACCTTCATGAAGGACTTAAGCATGGTTTGAAGTCAGAACTTGAGAAGGCTTCACCTTCACTGGGTCGCACTGCTCTTTATACAAGAGAGTCAAGAATAAATGAGTTGCCTAGGTACTTGACTGTGCAGTTTGTTCGTTTCTTTTGGAAAAGGGAATCAAACCAGAAGGCAAAGATTTTACGGAAAGTTGATTACCCGCTGGAACTGGATGTTTATGACTTTTGCTCAGATGAACTGAAACAAAAACTCCAAGCTCCCCGACAGATGCTGAGAGATGCAGAAAATGCTAAGTTTGGATTAAAAGCACAAGGAAAGGCCAGCAGCTCAAAAGAAAATGAGGGTTCATCAAGCAATGCTGGGGAATCATCCAGCATGGATATTGACAAAGCCGATTCTTCTGTGCCAAAGAAACATTTGACTGGCATCTATGATTTAATTGCTGTTTTGACGCACAAAGGGAGAAGTGCAGACTCAGGCCATTATGTTGGCTGGGTTAAGCAAGATGACGGGAAATGGATTGAATTTGATGATGACAACCCTAGCATACGCAAGGAGGAAGAGATTTTAAAGTTATCTGGTGGAGGCGACTGGCACATGGCTTACATTTGCCTGTACAAAGCTCGTGTTATCTGAATTGGAATGCCAGACAGGCTGATGAGCTGATTTGTTTACATTTCTCAAGTTGCCAGTAGTTTGCTTGCCTTTTGTAATGCATGAGCGAACGTATTATTGATTTTTCCAGTTTGGTTCAAACTGAGAAGTAAGCATGTGACTTGCATTGGTGCTGGTGTTTGGTCGGTGGTCACTGGGACTTTAGACGTGTAATTTTGAGATGTTGAACTAGAATATTTTACAGTAGTAAACAAATATATACTGCAAAGAAACTGAGCGGAAAATATAATTTATTTCATGGAACATATGTTATTTGCATATTTCTTT
CDS Sequence
- >LOC_Os01g36930.1
ATGCCGACCGTAAGCGTGAAATGGCAGAAGGAGACCTTCCCAGGCATAGAGATAGACACCAGCCAGCCGCCTGTTGTCTTTAAGACCCAGCTATACACTCTGACTGGTGTACCACCTGAAAGGCAAAAAATTATGGTGAAGGGTGGAATATTGAAGGATGATGCAGATTGGTCTACTTTGGGAGTGAAAGATGGTCAAAAATTGATGATGATAGGTACAGCTGATGAGATTGTGAAAGCTCCAGAGAAAGGACCAGTATTTGTAGAGGATCTACCAGAAGAAGAGCAAGTGGTTGCACTGGGACACAGTGCTGGTCTTTATAACTTGGGGAATACATGTTACATGAATTCCACTTTGCAGTGCCTGCATTCTGTTCCAGAGCTGAAGTCAGCTTTATTGAGTTATTCAGATAATGTGAGGGGTAATGGTGTTGACCAAGCCTCCCATAATTTGACTGTTGCAACTCGTAATACTTTCGGAGAGCTTGATCAAAGTGTTCGGCCTGTTGCACCTCTACTCTTCTTACAGACGCTGCGTAAAAAGTATCCCCAGTTTGCGCAACAACAAAATAATGTTTATATGCAACAGGATGCAGAAGAATGCTGGACCCAATTGGTGTATACACTTTCTCAAACTCTTACATCAGAAACAAGTGAACCTCCTGCTGGTCAAATGAAGGAACTTTTTGGGATTGATCTCGTGAGCAGGGTCCATTGTGCAGAAAGTGGTGAAGAGAGTTTAGAGAGAGAATCAGTTTATTCTTTGAAGTGTCATATATCTCATGATGTAAACCACCTTCATGAAGGACTTAAGCATGGTTTGAAGTCAGAACTTGAGAAGGCTTCACCTTCACTGGGTCGCACTGCTCTTTATACAAGAGAGTCAAGAATAAATGAGTTGCCTAGGTACTTGACTGTGCAGTTTGTTCGTTTCTTTTGGAAAAGGGAATCAAACCAGAAGGCAAAGATTTTACGGAAAGTTGATTACCCGCTGGAACTGGATGTTTATGACTTTTGCTCAGATGAACTGAAACAAAAACTCCAAGCTCCCCGACAGATGCTGAGAGATGCAGAAAATGCTAAGTTTGGATTAAAAGCACAAGGAAAGGCCAGCAGCTCAAAAGAAAATGAGGGTTCATCAAGCAATGCTGGGGAATCATCCAGCATGGATATTGACAAAGCCGATTCTTCTGTGCCAAAGAAACATTTGACTGGCATCTATGATTTAATTGCTGTTTTGACGCACAAAGGGAGAAGTGCAGACTCAGGCCATTATGTTGGCTGGGTTAAGCAAGATGACGGGAAATGGATTGAATTTGATGATGACAACCCTAGCATACGCAAGGAGGAAGAGATTTTAAAGTTATCTGGTGGAGGCGACTGGCACATGGCTTACATTTGCCTGTACAAAGCTCGTGTTATCTGA
Protein Sequence
- >LOC_Os01g36930.1
MPTVSVKWQKETFPGIEIDTSQPPVVFKTQLYTLTGVPPERQKIMVKGGILKDDADWSTLGVKDGQKLMMIGTADEIVKAPEKGPVFVEDLPEEEQVVALGHSAGLYNLGNTCYMNSTLQCLHSVPELKSALLSYSDNVRGNGVDQASHNLTVATRNTFGELDQSVRPVAPLLFLQTLRKKYPQFAQQQNNVYMQQDAEECWTQLVYTLSQTLTSETSEPPAGQMKELFGIDLVSRVHCAESGEESLERESVYSLKCHISHDVNHLHEGLKHGLKSELEKASPSLGRTALYTRESRINELPRYLTVQFVRFFWKRESNQKAKILRKVDYPLELDVYDFCSDELKQKLQAPRQMLRDAENAKFGLKAQGKASSSKENEGSSSNAGESSSMDIDKADSSVPKKHLTGIYDLIAVLTHKGRSADSGHYVGWVKQDDGKWIEFDDDNPSIRKEEEILKLSGGGDWHMAYICLYKARVI*