Gene Details:

Functional Descriptions:

  • The mesophyll cells in OsCAF1 mutant had decreased chloroplast numbers and damaged chloroplast structures.
  • OsCAF1 regulates chloroplast development by influencing the splicing of group II introns.
  • In the study, we generated OsCAF1 albino mutants, which eventually died at the seedling stage, through the editing of OsCAF1 with two CRM domains using CRISPR/Cas9 technology.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os01g31110.1
    CATTTACCCGTTGCAATTTTTTTCAGAGCGTGTACATTCCCGTGTTTGTCTGCTCCGGCTCCACCCGAACTCCGGCGCCCAATCCGCCGGCCTCGACGCCGGTTCGATACCCCCGATGTTATCCTGTGGGCGGAGGACCTAATCCTATCTATCCTGTTCCCCAACACCCATGGCAACTAGCCACCTCACCTCTCGCTCCCTCCTCGTCCAAGCCCAGTACCCCATCTCACGGCTCCCATCCAACCTCCGCCTCTCCCTCTCCCACCACAAGCAACCAGCCGCCGTCGCCAAGCGCCGCCGAGCCCCCGCCCCCTCCCACCCGGCCTTCTCTTCGGTCATCCGCGGCCGTCCCAAGAAAGTCCCCATCCCGGAAAACGGCGAGCCAGCCGCCGGTGTCCGCGTCACTGAACGTGGCCTGGCCTATCATCTTGACGGCGCGCCCTTCGAGTTCCAGTACAGTTACACAGAGACGCCGCGCGCGCGCCCCGTCGCGCTCCGCGAGGCCCCGTTCCTGCCGTTCGGGCCTGAGGTAACGCCGCGCCCATGGACCGGGAGGAAGCCGCTCCCCAAGAGCCGCAAGGAACTGCCTGAGTTCGACTCCTTCATGCTCCCGCCGCCGGGCAAGAAGGGGGTGAAGCCCGTGCAGTCGCCGGGGCCATTCCTTGCCGGCACGGAGCCGAGGTACCAAGCGGCGTCCAGGGAGGAGGTCCTCGGGGAGCCTCTCACAAAGGAGGAGGTCGACGAGCTCGTCAAGGCGACCCTCAAGACCAAGCGGCAGCTTAATATCGGTAGAGATGGTCTAACACACAATATGTTGGAGAACATTCATTCGCATTGGAAGAGGAAGAGAGTGTGCAAGATAAAATGCAAAGGTGTATGCACGGTTGATATGGATAATGTCTGCCAGCAGCTAGAGGAGAAAGTTGGAGGAAAAGTAATTCATCATCAGGGTGGTGTGATATTTCTCTTTCGTGGTAGAAACTACAATTACAGAACTCGCCCAATCTATCCACTTATGCTTTGGAAACCTGCTGCACCAGTGTACCCCCGCTTGGTTAAAAAGATCCCAGACGGCTTAACTCCAGATGAGGCAGAAGATATGCGCAAGAGAGGACGTCAGTTACCACCAATTTGCAAACTCGGAAAAAATGGTGTTTATCTTAACCTCGTGAAGCAAGTTCGAGAAGCATTTGAAGCATGTGATCTTGTCCGGGTTGATTGCTCAGGTCTTAATAAAAGTGATTGCAGAAAGATAGGAGCTAAACTTAAGGATCTAGTTCCCTGTACCTTACTGTCTTTTGAGTTTGAACATATACTGATGTGGAGAGGAAATGATTGGAAATCATCCCTTCCTCCATTAGAAGAAAATGATTTTAAAGTGGCGAGCGACCAAATTTTGAATAGCAAAGAAGCAGGTTCTGGAAGTGCTCTGACCCCAATTGAGCTGGTCAACAATGCCACGTCTCTCAAGAAATGCAACTTGATTGAAGGTGCAGAAAAATTGGAAGATTCCATGAAGTCTAGTTTTGAAAATGGTATGATTTTGGGTTCTGCATGTGGAAACCCTGGAGTATGCAACTCTGAAGGTATAGATGGAACTGAGTCCTCAGCTGATGCTCCAATTGAATTTTCTCCTTCAAATTCAGCAAGGGATTTAGATCCATCTCAAACATCAACATTGTATTGCCAAAGCTCCCTATTGGACAAGAGTGAAAATGGAGAGCTCATTGAGATGTACCCTGACAGATGTGGAAACTCGGAACAATCTCCAGATGTACCAGAAGCTTTAACTTGTCTAATGGGCAGCAGTGATGAGATTCATGAATTGGAAACTATGAGGAGAAACTGCAAACATTTAAACGGCAGCGATGGTGTTAACAGTGATTCCATAGTCCCTTCCTACATGGAAGGAATTTTACTCCTTTTCAAACAAGCCATTGACAGTGGCATGGCACTCGTGCTGAATGAAAATGAGTTTGCTGATGCCAATTATGTGTATCAAAAGTCTGTTGCTTTTACAAAGACGGCTCCACGATACCTGGTACTCCGGCATACACCAAGGAAGTCCCATGGTACCCAGAAGACTGAGCCAGCCAAGAATGTAAGGATAAATAAGCATCTTGAAGAACATAAAGTATCTGATCATGTCAAAAAGAAAGAAATTGTCATGGGAGGATCAAGAATGCAGAGAAATGATCACGCACGAGAATTTCTATCAGATGTTGTTCCACAGGGTACCTTAAGAGTAGATGAACTTGCTAAATTACTGGCTTAAAGGTGATCGGTCCTTTATTAACCGAAGGTGTGTTGCGTTATCAACCTTGAATTAACGTGCAAAGTATATACATGTACATTGATATGGGACGTATAAAACTTTTCGTCAATTTGGTCATGCTGTGTAACTGATCACGCTTTCTGCATTGAAATGTTGGAATGTAATAATATGGAACGGCGAAGCATTTTCAGACAA
CDS Sequence
  • >LOC_Os01g31110.1
    ATGGCAACTAGCCACCTCACCTCTCGCTCCCTCCTCGTCCAAGCCCAGTACCCCATCTCACGGCTCCCATCCAACCTCCGCCTCTCCCTCTCCCACCACAAGCAACCAGCCGCCGTCGCCAAGCGCCGCCGAGCCCCCGCCCCCTCCCACCCGGCCTTCTCTTCGGTCATCCGCGGCCGTCCCAAGAAAGTCCCCATCCCGGAAAACGGCGAGCCAGCCGCCGGTGTCCGCGTCACTGAACGTGGCCTGGCCTATCATCTTGACGGCGCGCCCTTCGAGTTCCAGTACAGTTACACAGAGACGCCGCGCGCGCGCCCCGTCGCGCTCCGCGAGGCCCCGTTCCTGCCGTTCGGGCCTGAGGTAACGCCGCGCCCATGGACCGGGAGGAAGCCGCTCCCCAAGAGCCGCAAGGAACTGCCTGAGTTCGACTCCTTCATGCTCCCGCCGCCGGGCAAGAAGGGGGTGAAGCCCGTGCAGTCGCCGGGGCCATTCCTTGCCGGCACGGAGCCGAGGTACCAAGCGGCGTCCAGGGAGGAGGTCCTCGGGGAGCCTCTCACAAAGGAGGAGGTCGACGAGCTCGTCAAGGCGACCCTCAAGACCAAGCGGCAGCTTAATATCGGTAGAGATGGTCTAACACACAATATGTTGGAGAACATTCATTCGCATTGGAAGAGGAAGAGAGTGTGCAAGATAAAATGCAAAGGTGTATGCACGGTTGATATGGATAATGTCTGCCAGCAGCTAGAGGAGAAAGTTGGAGGAAAAGTAATTCATCATCAGGGTGGTGTGATATTTCTCTTTCGTGGTAGAAACTACAATTACAGAACTCGCCCAATCTATCCACTTATGCTTTGGAAACCTGCTGCACCAGTGTACCCCCGCTTGGTTAAAAAGATCCCAGACGGCTTAACTCCAGATGAGGCAGAAGATATGCGCAAGAGAGGACGTCAGTTACCACCAATTTGCAAACTCGGAAAAAATGGTGTTTATCTTAACCTCGTGAAGCAAGTTCGAGAAGCATTTGAAGCATGTGATCTTGTCCGGGTTGATTGCTCAGGTCTTAATAAAAGTGATTGCAGAAAGATAGGAGCTAAACTTAAGGATCTAGTTCCCTGTACCTTACTGTCTTTTGAGTTTGAACATATACTGATGTGGAGAGGAAATGATTGGAAATCATCCCTTCCTCCATTAGAAGAAAATGATTTTAAAGTGGCGAGCGACCAAATTTTGAATAGCAAAGAAGCAGGTTCTGGAAGTGCTCTGACCCCAATTGAGCTGGTCAACAATGCCACGTCTCTCAAGAAATGCAACTTGATTGAAGGTGCAGAAAAATTGGAAGATTCCATGAAGTCTAGTTTTGAAAATGGTATGATTTTGGGTTCTGCATGTGGAAACCCTGGAGTATGCAACTCTGAAGGTATAGATGGAACTGAGTCCTCAGCTGATGCTCCAATTGAATTTTCTCCTTCAAATTCAGCAAGGGATTTAGATCCATCTCAAACATCAACATTGTATTGCCAAAGCTCCCTATTGGACAAGAGTGAAAATGGAGAGCTCATTGAGATGTACCCTGACAGATGTGGAAACTCGGAACAATCTCCAGATGTACCAGAAGCTTTAACTTGTCTAATGGGCAGCAGTGATGAGATTCATGAATTGGAAACTATGAGGAGAAACTGCAAACATTTAAACGGCAGCGATGGTGTTAACAGTGATTCCATAGTCCCTTCCTACATGGAAGGAATTTTACTCCTTTTCAAACAAGCCATTGACAGTGGCATGGCACTCGTGCTGAATGAAAATGAGTTTGCTGATGCCAATTATGTGTATCAAAAGTCTGTTGCTTTTACAAAGACGGCTCCACGATACCTGGTACTCCGGCATACACCAAGGAAGTCCCATGGTACCCAGAAGACTGAGCCAGCCAAGAATGTAAGGATAAATAAGCATCTTGAAGAACATAAAGTATCTGATCATGTCAAAAAGAAAGAAATTGTCATGGGAGGATCAAGAATGCAGAGAAATGATCACGCACGAGAATTTCTATCAGATGTTGTTCCACAGGGTACCTTAAGAGTAGATGAACTTGCTAAATTACTGGCTTAA
Protein Sequence
  • >LOC_Os01g31110.1
    MATSHLTSRSLLVQAQYPISRLPSNLRLSLSHHKQPAAVAKRRRAPAPSHPAFSSVIRGRPKKVPIPENGEPAAGVRVTERGLAYHLDGAPFEFQYSYTETPRARPVALREAPFLPFGPEVTPRPWTGRKPLPKSRKELPEFDSFMLPPPGKKGVKPVQSPGPFLAGTEPRYQAASREEVLGEPLTKEEVDELVKATLKTKRQLNIGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTVDMDNVCQQLEEKVGGKVIHHQGGVIFLFRGRNYNYRTRPIYPLMLWKPAAPVYPRLVKKIPDGLTPDEAEDMRKRGRQLPPICKLGKNGVYLNLVKQVREAFEACDLVRVDCSGLNKSDCRKIGAKLKDLVPCTLLSFEFEHILMWRGNDWKSSLPPLEENDFKVASDQILNSKEAGSGSALTPIELVNNATSLKKCNLIEGAEKLEDSMKSSFENGMILGSACGNPGVCNSEGIDGTESSADAPIEFSPSNSARDLDPSQTSTLYCQSSLLDKSENGELIEMYPDRCGNSEQSPDVPEALTCLMGSSDEIHELETMRRNCKHLNGSDGVNSDSIVPSYMEGILLLFKQAIDSGMALVLNENEFADANYVYQKSVAFTKTAPRYLVLRHTPRKSHGTQKTEPAKNVRINKHLEEHKVSDHVKKKEIVMGGSRMQRNDHAREFLSDVVPQGTLRVDELAKLLA*