Information report for IPI1
Gene Details
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Functional Descriptions
- IPI1 promotes the degradation of IPA1 in panicles while it stabilizes IPA1 in shoot apexes.
- Moreover, IPI1 could ubiquitinate IPA1-mediated complex with different polyubiquitin chains, adding K48-linked polyubiquitin chains in panicles and K63-linked polyubiquitin chains in the shoot apex.
- Consistent with these findings, the IPI1 loss-of-function mutants showed markedly altered plant architecture, including more tillers, enlarged panicles, and increased yield per plant.
- These results demonstrate that IPI1 affects plant architecture through precisely tuning IPA1 protein levels in different tissues in rice, and provide new insight into the tissue-specific regulation of plant architecture and important genetic resources for molecular breeding applications.
Functional Keywords
- shoot , yield , architecture , breeding , plant-architecture
Literature and News
Gene Resources
- UniProt: Q5Z8R1
- EMBL: AK070217, AP003258, AP003764
- AlphaFoldDB: Q5Z8R1
- EnsemblPlants: Os01t0350900-02
- Gramene: Os01t0350900-02
- KEGG: dosa:Os01g0350900
- InterPro: IPR001841, IPR013083, IPR044274
- PANTHER: PTHR46798, PTHR46798:SF13
- SUPFAM: SSF57850
- PROSITE: PS50089
- Gene3D: 3.30.40.10
- SWISS-MODEL: Q5Z8R1
- Conserved Domain Database: cd16448
Homologs
- Arabidopsis thaliana: AT3G05545
- Brachypodium distachyon: BRADI_3g41680v3
- Brassica napus: BnaA05G0002700ZS, BnaC04G0002800ZS
- Brassica oleracea: Bo4g002370
- Brassica rapa: Bra004436
- Juglans regia: Jr08_12330
- Prunus avium: Pav_sc0000174.1_g210.1.mk
- Saccharum spontaneum: Sspon.07G0012650-1A
- Setaria viridis: SEVIR_2G281100v2
Sequences
cDNA Sequence
- >LOC_Os01g24880.2
CTGGTGGACGGACACGGAGCAGATAGCCAGCAGGAGTCCGTCGCCGTTGGTGGGAACGAGACGGTTGCCGCGCCCGCGCGCGAGATCGGAGCTCCGGGGAGGCGAGGCGCAGGCGCAGGTGGGCGCGTGTTCTTCGTCGGGGGCACCCCGTTCGCGCTCTACCGGGAGGGATCCGCGGGGCGGGGAGTGGTGGGGAACGCCGCGAGCGCAGCCGGGATGGGCGCCGAGGAGGAGGAGGAGCCGGCGTCGGCCGTCGGGAGGGAGGGGGGAGGAGGAGGAGGCGGGGCGAGGGCCGCGGGGGCGGGGGCGGGGGGCGACACCGCCGACGACGACGACAGCGGGGAGAGCGCCGCGGCGGTGGTCCCGTGCTCGATCTGCCTCGACGCGGTGGTCGCCGGCGGCGGGGACAGGTCCACGGCGAGGCTGCAGTGCGGCCACGAGTTCCACCTCGATTGCATTGGTTCAGCATTTAATGCCAAAGGAGTTATGCAATGCCCCAACTGTCGCCAAATTGAGAGGGGGAATTGGCTCTATGCAAATGGTTCGCGTCCATCACAGGATGTAAGTAATGATGATTGGGGTCATGATGAAGACTTTTATGATGCTAATCAACCAGAGACATCAAGGAGTGTCTTTTTGCCATTCCGCTTCCAATGGTGTCCTATTGGCCGCTTAGCCCAACTTCCATCTGTATTTGATGAAGGAGAGTCAGCACCACCCGTAACCTTTCATGATTTCATGGGACAGAACTTCACTTCTGAGCATTTGCCTGTATCAGCACCTGGGGCAACTCCTCCAGGCCCATATATCGCTTACTTTCAGCCTCTTCAATCATCGGCATCATCATCAAGTTCCCATGTCACTGAAAGAACTATGGATGGCACCACCTATCATGATCACTGGAACCCCCTACCTGGGCCATCAGATGGTCGACCATTGGCTACAGTGCATCCCATTGATTTCCATCATAACCACTGGACGCACCTGCCCAACTCCTATTCTCAACCCAACAGCAATAATGGTGTAGCTGAGCAGATGGCAATCCCTGTGGTACCAATGAGGGTTGGGGGCCTTGATAGTGATAGCCAACAGCGAGGATCTCTCCCCTCAGTTTATGGAAATGGGTAAGTTTCATTTCTTTCTAAGTTATGAATTGACTGCTTCCTTCAGTAAGACTTGCATGCTGCCTCTATCCAGAGAAAATGCCTACAGTTCTAAGATAAAATTTCTCTGGTAGCCTGTGACAATTGTAGCTAAATTTGATATTTCAGGTGTTATAAACAAAAGGTATCTCATTGACTTATTCTTTAGTGAATATTGTATGCAAACAGAATTAAGTTCCTTTGGACTAAATGTTGACAAAAAAAACCTAGAAGAATGATGATTTTTTTTAATCTTTTCTGCATTATGATTATATGGTAGTTACATTGCCAAAGCTCTGCTGTGGCTATTGGAAAAATAGTTACACCTATGCATGGTTCAGTACCTGCCTTTTTGTTTATTATTGTACGATATATCTTAACGCCTAAGACTCGTGTGTTTTTGGTTTCACAGATCTGGATCAAGGTCTAGAATTCCAAGTGTTCCTCCTATGGCACCACAATTCATGAGGCCGCATGGTAACATCAACGAACAATATCAGCAGAATTCGTCCAGCCTGTATGCTGCGCCGCAGCGTAGGACTGCCGTGCAGGCTGTCCAAGACAGCATGAACTTTACCCTGTTCCCGCAGGCTCCAACTGGCCCTAATTCAATGGAGACGGAGGATGCCGGAGGCAACCAGTTCTATGCCTGGGAGAGGGACCGCTTCGCCCCTTACCCGCTAATGCCCGTAGATTCTGAAGCAAACTGGTGGGGCAGCACGCCGCAATCCCATGGCGTGACGGATCATTCAGCTGCCCCCGGTAGGAGGCTATTTGGTCAATGGATCGGCGCCGGGAGGTCGCCACCGCCGCCTCCACCGCCACCAGCGGACAACTCGTCGTACCGACAGATGCACATCCCTCGGATGTAGCTTAGCCCCCCGACCGTCGCCTGAACCAACAAAGTTAAATATAAGAACCTGGAAAAAACCCCTGTTTGGCTGTAAGAAAGTAGGGTGAAGACACCGGTTGTATGTCGTCCTGTGTTTGCGTGGTAATTAGACTCCCGAGACAAATATGCAGGCAGGTGAAAAAAGAACACCAAGAACGCAAACCCAAACTACCCAAGGAGGAAAAACGTTTCAGCTTGGGTGTTTATGTGGAATTCGGTTCGGTGAAGCATCATAGTACATATTCCAAGCCATGTTGGGGCTTCTTTAAAGTTGTCGCGTGTTTATCGTTTGCTTG - >LOC_Os01g24880.1
CTGGTGGACGGACACGGAGCAGATAGCCAGCAGGAGTCCGTCGCCGTTGGTGGGAACGAGACGGTTGCCGCGCCCGCGCGCGAGATCGGAGCTCCGGGGAGGCGAGGCGCAGGCGCAGGTGGGCGCGTGTTCTTCGTCGGGGGCACCCCGTTCGCGCTCTACCGGGAGGGATCCGCGGGGCGGGGAGTGGTGGGGAACGCCGCGAGCGCAGCCGGGATGGGCGCCGAGGAGGAGGAGGAGCCGGCGTCGGCCGTCGGGAGGGAGGGGGGAGGAGGAGGAGGCGGGGCGAGGGCCGCGGGGGCGGGGGCGGGGGGCGACACCGCCGACGACGACGACAGCGGGGAGAGCGCCGCGGCGGTGGTCCCGTGCTCGATCTGCCTCGACGCGGTGGTCGCCGGCGGCGGGGACAGGTCCACGGCGAGGCTGCAGTGCGGCCACGAGTTCCACCTCGATTGCATTGGTTCAGCATTTAATGCCAAAGGAGTTATGCAATGCCCCAACTGTCGCCAAATTGAGAGGGGGAATTGGCTCTATGCAAATGGTTCGCGTCCATCACAGGATGTAAGTAATGATGATTGGGGTCATGATGAAGACTTTTATGATGCTAATCAACCAGAGACATCAAGGAGTGTCTTTTTGCCATTCCGCTTCCAATGGTGTCCTATTGGCCGCTTAGCCCAACTTCCATCTGTATTTGATGAAGGAGAGTCAGCACCACCCGTAACCTTTCATGATTTCATGGGACAGAACTTCACTTCTGAGCATTTGCCTGTATCAGCACCTGGGGCAACTCCTCCAGGCCCATATATCGCTTACTTTCAGCCTCTTCAATCATCGGCATCATCATCAAGTTCCCATGTCACTGAAAGAACTATGGATGGCACCACCTATCATGATCACTGGAACCCCCTACCTGGGCCATCAGATGGTCGACCATTGGCTACAGTGCATCCCATTGATTTCCATCATAACCACTGGACGCACCTGCCCAACTCCTATTCTCAACCCAACAGCAATAATGGTGTAGCTGAGCAGATGGCAATCCCTGTGGTACCAATGAGGGTTGGGGGCCTTGATAGTGATAGCCAACAGCGAGGATCTCTCCCCTCAGTTTATGGAAATGGGTAAGTTTCATTTCTTTCTAAGTTATGAATTGACTGCTTCCTTCAGTAAGACTTGCATGCTGCCTCTATCCAGAGAAAATGCCTACAGTTCTAAGATAAAATTTCTCTGGTAGCCTGTGACAATTGTAGCTAAATTTGATATTTCAGGTGTTATAAACAAAAGGTATCTCATTGACTTATTCTTTAGTGAATATTGTATGCAAACAGAATTAAGTTCCTTTGGACTAAATGTTGACAAAAAAAACCTAGAAGAATGATGATTTTTTTTAATCTTTTCTGCATTATGATTATATGGTAGTTACATTGCCAAAGCTCTGCTGTGGCTATTGGAAAAATAGTTACACCTATGCATGGTTCAGTACCTGCCTTTTTGTTTATTATTGTACGATATATCTTAACGCCTAAGACTCGTGTGTTTTTGGTTTCACAGATCTGGATCAAGGTCTAGAATTCCAAGTGTTCCTCCTATGGCACCACAATTCATGAGGCCGCATGGTAACATCAACGAACAATATCAGCAGAATTCGTCCAGCCTGTATGCTGCGCCGCAGCGTAGGACTGCCGTGCAGGCTGTCCAAGACAGCATGAACTTTACCCTGTTCCCGCAGGCTCCAACTGGCCCTAATTCAATGGAGACGGAGGATGCCGGAGGCAACCAGTTCTATGCCTGGGAGAGGGACCGCTTCGCCCCTTACCCGCTAATGCCCGTAGATTCTGAAGCAAACTGGTGGGGCAGCACGCCGCAATCCCATGGCGTGACGGATCATTCAGCTGCCCCCGGTAGGAGGCTATTTGGTCAATGGATCGGCGCCGGGAGGTCGCCACCGCCGCCTCCACCGCCACCAGCGGACAACTCGTCGTACCGACAGATGCACATCCCTCGGATGTAGCTTAGCCCCCCGACCGTCGCCTGAACCAACAAAGTTAAATATAAGAACCTGGAAAAAACCCCTGTTTGGCTGTAAGAAAGTAGGGTGAAGACACCGGTTGTATGTCGTCCTGTGTTTGCGTGGTAATTAGACTCCCGAGACAAATATGCAGGCAGGTGAAAAAAGAACACCAAGAACGCAAACCCAAACTACCCAAGGAGGAAAAACGTTTCAGCTTGGGTGTTTATGTGGAATTCGGTTCGGTGAAGCATCATAGTACATATTCCAAGCCATGTTGGGGCTTCTTTAAAGTTGTCGCGTGTTTATCGTTTGCTTG
CDS Sequence
- >LOC_Os01g24880.2
ATGGGCGCCGAGGAGGAGGAGGAGCCGGCGTCGGCCGTCGGGAGGGAGGGGGGAGGAGGAGGAGGCGGGGCGAGGGCCGCGGGGGCGGGGGCGGGGGGCGACACCGCCGACGACGACGACAGCGGGGAGAGCGCCGCGGCGGTGGTCCCGTGCTCGATCTGCCTCGACGCGGTGGTCGCCGGCGGCGGGGACAGGTCCACGGCGAGGCTGCAGTGCGGCCACGAGTTCCACCTCGATTGCATTGGTTCAGCATTTAATGCCAAAGGAGTTATGCAATGCCCCAACTGTCGCCAAATTGAGAGGGGGAATTGGCTCTATGCAAATGGTTCGCGTCCATCACAGGATGTAAGTAATGATGATTGGGGTCATGATGAAGACTTTTATGATGCTAATCAACCAGAGACATCAAGGAGTGTCTTTTTGCCATTCCGCTTCCAATGGTGTCCTATTGGCCGCTTAGCCCAACTTCCATCTGTATTTGATGAAGGAGAGTCAGCACCACCCGTAACCTTTCATGATTTCATGGGACAGAACTTCACTTCTGAGCATTTGCCTGTATCAGCACCTGGGGCAACTCCTCCAGGCCCATATATCGCTTACTTTCAGCCTCTTCAATCATCGGCATCATCATCAAGTTCCCATGTCACTGAAAGAACTATGGATGGCACCACCTATCATGATCACTGGAACCCCCTACCTGGGCCATCAGATGGTCGACCATTGGCTACAGTGCATCCCATTGATTTCCATCATAACCACTGGACGCACCTGCCCAACTCCTATTCTCAACCCAACAGCAATAATGGTGTAGCTGAGCAGATGGCAATCCCTGTGGTACCAATGAGGGTTGGGGGCCTTGATAGTGATAGCCAACAGCGAGGATCTCTCCCCTCAGTTTATGGAAATGGGTAA - >LOC_Os01g24880.1
ATGGGCGCCGAGGAGGAGGAGGAGCCGGCGTCGGCCGTCGGGAGGGAGGGGGGAGGAGGAGGAGGCGGGGCGAGGGCCGCGGGGGCGGGGGCGGGGGGCGACACCGCCGACGACGACGACAGCGGGGAGAGCGCCGCGGCGGTGGTCCCGTGCTCGATCTGCCTCGACGCGGTGGTCGCCGGCGGCGGGGACAGGTCCACGGCGAGGCTGCAGTGCGGCCACGAGTTCCACCTCGATTGCATTGGTTCAGCATTTAATGCCAAAGGAGTTATGCAATGCCCCAACTGTCGCCAAATTGAGAGGGGGAATTGGCTCTATGCAAATGGTTCGCGTCCATCACAGGATGTAAGTAATGATGATTGGGGTCATGATGAAGACTTTTATGATGCTAATCAACCAGAGACATCAAGGAGTGTCTTTTTGCCATTCCGCTTCCAATGGTGTCCTATTGGCCGCTTAGCCCAACTTCCATCTGTATTTGATGAAGGAGAGTCAGCACCACCCGTAACCTTTCATGATTTCATGGGACAGAACTTCACTTCTGAGCATTTGCCTGTATCAGCACCTGGGGCAACTCCTCCAGGCCCATATATCGCTTACTTTCAGCCTCTTCAATCATCGGCATCATCATCAAGTTCCCATGTCACTGAAAGAACTATGGATGGCACCACCTATCATGATCACTGGAACCCCCTACCTGGGCCATCAGATGGTCGACCATTGGCTACAGTGCATCCCATTGATTTCCATCATAACCACTGGACGCACCTGCCCAACTCCTATTCTCAACCCAACAGCAATAATGGTGTAGCTGAGCAGATGGCAATCCCTGTGGTACCAATGAGGGTTGGGGGCCTTGATAGTGATAGCCAACAGCGAGGATCTCTCCCCTCAGTTTATGGAAATGGGTAA
Protein Sequence
- >LOC_Os01g24880.2
MGAEEEEEPASAVGREGGGGGGGARAAGAGAGGDTADDDDSGESAAAVVPCSICLDAVVAGGGDRSTARLQCGHEFHLDCIGSAFNAKGVMQCPNCRQIERGNWLYANGSRPSQDVSNDDWGHDEDFYDANQPETSRSVFLPFRFQWCPIGRLAQLPSVFDEGESAPPVTFHDFMGQNFTSEHLPVSAPGATPPGPYIAYFQPLQSSASSSSSHVTERTMDGTTYHDHWNPLPGPSDGRPLATVHPIDFHHNHWTHLPNSYSQPNSNNGVAEQMAIPVVPMRVGGLDSDSQQRGSLPSVYGNG* - >LOC_Os01g24880.1
MGAEEEEEPASAVGREGGGGGGGARAAGAGAGGDTADDDDSGESAAAVVPCSICLDAVVAGGGDRSTARLQCGHEFHLDCIGSAFNAKGVMQCPNCRQIERGNWLYANGSRPSQDVSNDDWGHDEDFYDANQPETSRSVFLPFRFQWCPIGRLAQLPSVFDEGESAPPVTFHDFMGQNFTSEHLPVSAPGATPPGPYIAYFQPLQSSASSSSSHVTERTMDGTTYHDHWNPLPGPSDGRPLATVHPIDFHHNHWTHLPNSYSQPNSNNGVAEQMAIPVVPMRVGGLDSDSQQRGSLPSVYGNG*