Gene Details:
- MSU gene ID: LOC_Os01g24880
- RAPdb gene ID: Os01g0350900
- Gene Symbol: IPI1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- IPI1 promotes the degradation of IPA1 in panicles while it stabilizes IPA1 in shoot apexes.
- Moreover, IPI1 could ubiquitinate IPA1-mediated complex with different polyubiquitin chains, adding K48-linked polyubiquitin chains in panicles and K63-linked polyubiquitin chains in the shoot apex.
- Consistent with these findings, the IPI1 loss-of-function mutants showed markedly altered plant architecture, including more tillers, enlarged panicles, and increased yield per plant.
- These results demonstrate that IPI1 affects plant architecture through precisely tuning IPA1 protein levels in different tissues in rice, and provide new insight into the tissue-specific regulation of plant architecture and important genetic resources for molecular breeding applications.
Function-related keywords:
- shoot , yield , architecture , breeding , plant-architecture
Literature:
- Tissue-Specific Ubiquitination by IPA1 INTERACTING PROTEIN1 Modulates IPA1 Protein Levels to Regulate Plant Architecture in Rice . DOI: 10.1105/tpc.16.00879 ; PMID: 28298520
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os01g24880.2
CTGGTGGACGGACACGGAGCAGATAGCCAGCAGGAGTCCGTCGCCGTTGGTGGGAACGAGACGGTTGCCGCGCCCGCGCGCGAGATCGGAGCTCCGGGGAGGCGAGGCGCAGGCGCAGGTGGGCGCGTGTTCTTCGTCGGGGGCACCCCGTTCGCGCTCTACCGGGAGGGATCCGCGGGGCGGGGAGTGGTGGGGAACGCCGCGAGCGCAGCCGGGATGGGCGCCGAGGAGGAGGAGGAGCCGGCGTCGGCCGTCGGGAGGGAGGGGGGAGGAGGAGGAGGCGGGGCGAGGGCCGCGGGGGCGGGGGCGGGGGGCGACACCGCCGACGACGACGACAGCGGGGAGAGCGCCGCGGCGGTGGTCCCGTGCTCGATCTGCCTCGACGCGGTGGTCGCCGGCGGCGGGGACAGGTCCACGGCGAGGCTGCAGTGCGGCCACGAGTTCCACCTCGATTGCATTGGTTCAGCATTTAATGCCAAAGGAGTTATGCAATGCCCCAACTGTCGCCAAATTGAGAGGGGGAATTGGCTCTATGCAAATGGTTCGCGTCCATCACAGGATGTAAGTAATGATGATTGGGGTCATGATGAAGACTTTTATGATGCTAATCAACCAGAGACATCAAGGAGTGTCTTTTTGCCATTCCGCTTCCAATGGTGTCCTATTGGCCGCTTAGCCCAACTTCCATCTGTATTTGATGAAGGAGAGTCAGCACCACCCGTAACCTTTCATGATTTCATGGGACAGAACTTCACTTCTGAGCATTTGCCTGTATCAGCACCTGGGGCAACTCCTCCAGGCCCATATATCGCTTACTTTCAGCCTCTTCAATCATCGGCATCATCATCAAGTTCCCATGTCACTGAAAGAACTATGGATGGCACCACCTATCATGATCACTGGAACCCCCTACCTGGGCCATCAGATGGTCGACCATTGGCTACAGTGCATCCCATTGATTTCCATCATAACCACTGGACGCACCTGCCCAACTCCTATTCTCAACCCAACAGCAATAATGGTGTAGCTGAGCAGATGGCAATCCCTGTGGTACCAATGAGGGTTGGGGGCCTTGATAGTGATAGCCAACAGCGAGGATCTCTCCCCTCAGTTTATGGAAATGGGTAAGTTTCATTTCTTTCTAAGTTATGAATTGACTGCTTCCTTCAGTAAGACTTGCATGCTGCCTCTATCCAGAGAAAATGCCTACAGTTCTAAGATAAAATTTCTCTGGTAGCCTGTGACAATTGTAGCTAAATTTGATATTTCAGGTGTTATAAACAAAAGGTATCTCATTGACTTATTCTTTAGTGAATATTGTATGCAAACAGAATTAAGTTCCTTTGGACTAAATGTTGACAAAAAAAACCTAGAAGAATGATGATTTTTTTTAATCTTTTCTGCATTATGATTATATGGTAGTTACATTGCCAAAGCTCTGCTGTGGCTATTGGAAAAATAGTTACACCTATGCATGGTTCAGTACCTGCCTTTTTGTTTATTATTGTACGATATATCTTAACGCCTAAGACTCGTGTGTTTTTGGTTTCACAGATCTGGATCAAGGTCTAGAATTCCAAGTGTTCCTCCTATGGCACCACAATTCATGAGGCCGCATGGTAACATCAACGAACAATATCAGCAGAATTCGTCCAGCCTGTATGCTGCGCCGCAGCGTAGGACTGCCGTGCAGGCTGTCCAAGACAGCATGAACTTTACCCTGTTCCCGCAGGCTCCAACTGGCCCTAATTCAATGGAGACGGAGGATGCCGGAGGCAACCAGTTCTATGCCTGGGAGAGGGACCGCTTCGCCCCTTACCCGCTAATGCCCGTAGATTCTGAAGCAAACTGGTGGGGCAGCACGCCGCAATCCCATGGCGTGACGGATCATTCAGCTGCCCCCGGTAGGAGGCTATTTGGTCAATGGATCGGCGCCGGGAGGTCGCCACCGCCGCCTCCACCGCCACCAGCGGACAACTCGTCGTACCGACAGATGCACATCCCTCGGATGTAGCTTAGCCCCCCGACCGTCGCCTGAACCAACAAAGTTAAATATAAGAACCTGGAAAAAACCCCTGTTTGGCTGTAAGAAAGTAGGGTGAAGACACCGGTTGTATGTCGTCCTGTGTTTGCGTGGTAATTAGACTCCCGAGACAAATATGCAGGCAGGTGAAAAAAGAACACCAAGAACGCAAACCCAAACTACCCAAGGAGGAAAAACGTTTCAGCTTGGGTGTTTATGTGGAATTCGGTTCGGTGAAGCATCATAGTACATATTCCAAGCCATGTTGGGGCTTCTTTAAAGTTGTCGCGTGTTTATCGTTTGCTTG - >LOC_Os01g24880.1
CTGGTGGACGGACACGGAGCAGATAGCCAGCAGGAGTCCGTCGCCGTTGGTGGGAACGAGACGGTTGCCGCGCCCGCGCGCGAGATCGGAGCTCCGGGGAGGCGAGGCGCAGGCGCAGGTGGGCGCGTGTTCTTCGTCGGGGGCACCCCGTTCGCGCTCTACCGGGAGGGATCCGCGGGGCGGGGAGTGGTGGGGAACGCCGCGAGCGCAGCCGGGATGGGCGCCGAGGAGGAGGAGGAGCCGGCGTCGGCCGTCGGGAGGGAGGGGGGAGGAGGAGGAGGCGGGGCGAGGGCCGCGGGGGCGGGGGCGGGGGGCGACACCGCCGACGACGACGACAGCGGGGAGAGCGCCGCGGCGGTGGTCCCGTGCTCGATCTGCCTCGACGCGGTGGTCGCCGGCGGCGGGGACAGGTCCACGGCGAGGCTGCAGTGCGGCCACGAGTTCCACCTCGATTGCATTGGTTCAGCATTTAATGCCAAAGGAGTTATGCAATGCCCCAACTGTCGCCAAATTGAGAGGGGGAATTGGCTCTATGCAAATGGTTCGCGTCCATCACAGGATGTAAGTAATGATGATTGGGGTCATGATGAAGACTTTTATGATGCTAATCAACCAGAGACATCAAGGAGTGTCTTTTTGCCATTCCGCTTCCAATGGTGTCCTATTGGCCGCTTAGCCCAACTTCCATCTGTATTTGATGAAGGAGAGTCAGCACCACCCGTAACCTTTCATGATTTCATGGGACAGAACTTCACTTCTGAGCATTTGCCTGTATCAGCACCTGGGGCAACTCCTCCAGGCCCATATATCGCTTACTTTCAGCCTCTTCAATCATCGGCATCATCATCAAGTTCCCATGTCACTGAAAGAACTATGGATGGCACCACCTATCATGATCACTGGAACCCCCTACCTGGGCCATCAGATGGTCGACCATTGGCTACAGTGCATCCCATTGATTTCCATCATAACCACTGGACGCACCTGCCCAACTCCTATTCTCAACCCAACAGCAATAATGGTGTAGCTGAGCAGATGGCAATCCCTGTGGTACCAATGAGGGTTGGGGGCCTTGATAGTGATAGCCAACAGCGAGGATCTCTCCCCTCAGTTTATGGAAATGGGTAAGTTTCATTTCTTTCTAAGTTATGAATTGACTGCTTCCTTCAGTAAGACTTGCATGCTGCCTCTATCCAGAGAAAATGCCTACAGTTCTAAGATAAAATTTCTCTGGTAGCCTGTGACAATTGTAGCTAAATTTGATATTTCAGGTGTTATAAACAAAAGGTATCTCATTGACTTATTCTTTAGTGAATATTGTATGCAAACAGAATTAAGTTCCTTTGGACTAAATGTTGACAAAAAAAACCTAGAAGAATGATGATTTTTTTTAATCTTTTCTGCATTATGATTATATGGTAGTTACATTGCCAAAGCTCTGCTGTGGCTATTGGAAAAATAGTTACACCTATGCATGGTTCAGTACCTGCCTTTTTGTTTATTATTGTACGATATATCTTAACGCCTAAGACTCGTGTGTTTTTGGTTTCACAGATCTGGATCAAGGTCTAGAATTCCAAGTGTTCCTCCTATGGCACCACAATTCATGAGGCCGCATGGTAACATCAACGAACAATATCAGCAGAATTCGTCCAGCCTGTATGCTGCGCCGCAGCGTAGGACTGCCGTGCAGGCTGTCCAAGACAGCATGAACTTTACCCTGTTCCCGCAGGCTCCAACTGGCCCTAATTCAATGGAGACGGAGGATGCCGGAGGCAACCAGTTCTATGCCTGGGAGAGGGACCGCTTCGCCCCTTACCCGCTAATGCCCGTAGATTCTGAAGCAAACTGGTGGGGCAGCACGCCGCAATCCCATGGCGTGACGGATCATTCAGCTGCCCCCGGTAGGAGGCTATTTGGTCAATGGATCGGCGCCGGGAGGTCGCCACCGCCGCCTCCACCGCCACCAGCGGACAACTCGTCGTACCGACAGATGCACATCCCTCGGATGTAGCTTAGCCCCCCGACCGTCGCCTGAACCAACAAAGTTAAATATAAGAACCTGGAAAAAACCCCTGTTTGGCTGTAAGAAAGTAGGGTGAAGACACCGGTTGTATGTCGTCCTGTGTTTGCGTGGTAATTAGACTCCCGAGACAAATATGCAGGCAGGTGAAAAAAGAACACCAAGAACGCAAACCCAAACTACCCAAGGAGGAAAAACGTTTCAGCTTGGGTGTTTATGTGGAATTCGGTTCGGTGAAGCATCATAGTACATATTCCAAGCCATGTTGGGGCTTCTTTAAAGTTGTCGCGTGTTTATCGTTTGCTTG
CDS Sequence
- >LOC_Os01g24880.2
ATGGGCGCCGAGGAGGAGGAGGAGCCGGCGTCGGCCGTCGGGAGGGAGGGGGGAGGAGGAGGAGGCGGGGCGAGGGCCGCGGGGGCGGGGGCGGGGGGCGACACCGCCGACGACGACGACAGCGGGGAGAGCGCCGCGGCGGTGGTCCCGTGCTCGATCTGCCTCGACGCGGTGGTCGCCGGCGGCGGGGACAGGTCCACGGCGAGGCTGCAGTGCGGCCACGAGTTCCACCTCGATTGCATTGGTTCAGCATTTAATGCCAAAGGAGTTATGCAATGCCCCAACTGTCGCCAAATTGAGAGGGGGAATTGGCTCTATGCAAATGGTTCGCGTCCATCACAGGATGTAAGTAATGATGATTGGGGTCATGATGAAGACTTTTATGATGCTAATCAACCAGAGACATCAAGGAGTGTCTTTTTGCCATTCCGCTTCCAATGGTGTCCTATTGGCCGCTTAGCCCAACTTCCATCTGTATTTGATGAAGGAGAGTCAGCACCACCCGTAACCTTTCATGATTTCATGGGACAGAACTTCACTTCTGAGCATTTGCCTGTATCAGCACCTGGGGCAACTCCTCCAGGCCCATATATCGCTTACTTTCAGCCTCTTCAATCATCGGCATCATCATCAAGTTCCCATGTCACTGAAAGAACTATGGATGGCACCACCTATCATGATCACTGGAACCCCCTACCTGGGCCATCAGATGGTCGACCATTGGCTACAGTGCATCCCATTGATTTCCATCATAACCACTGGACGCACCTGCCCAACTCCTATTCTCAACCCAACAGCAATAATGGTGTAGCTGAGCAGATGGCAATCCCTGTGGTACCAATGAGGGTTGGGGGCCTTGATAGTGATAGCCAACAGCGAGGATCTCTCCCCTCAGTTTATGGAAATGGGTAA - >LOC_Os01g24880.1
ATGGGCGCCGAGGAGGAGGAGGAGCCGGCGTCGGCCGTCGGGAGGGAGGGGGGAGGAGGAGGAGGCGGGGCGAGGGCCGCGGGGGCGGGGGCGGGGGGCGACACCGCCGACGACGACGACAGCGGGGAGAGCGCCGCGGCGGTGGTCCCGTGCTCGATCTGCCTCGACGCGGTGGTCGCCGGCGGCGGGGACAGGTCCACGGCGAGGCTGCAGTGCGGCCACGAGTTCCACCTCGATTGCATTGGTTCAGCATTTAATGCCAAAGGAGTTATGCAATGCCCCAACTGTCGCCAAATTGAGAGGGGGAATTGGCTCTATGCAAATGGTTCGCGTCCATCACAGGATGTAAGTAATGATGATTGGGGTCATGATGAAGACTTTTATGATGCTAATCAACCAGAGACATCAAGGAGTGTCTTTTTGCCATTCCGCTTCCAATGGTGTCCTATTGGCCGCTTAGCCCAACTTCCATCTGTATTTGATGAAGGAGAGTCAGCACCACCCGTAACCTTTCATGATTTCATGGGACAGAACTTCACTTCTGAGCATTTGCCTGTATCAGCACCTGGGGCAACTCCTCCAGGCCCATATATCGCTTACTTTCAGCCTCTTCAATCATCGGCATCATCATCAAGTTCCCATGTCACTGAAAGAACTATGGATGGCACCACCTATCATGATCACTGGAACCCCCTACCTGGGCCATCAGATGGTCGACCATTGGCTACAGTGCATCCCATTGATTTCCATCATAACCACTGGACGCACCTGCCCAACTCCTATTCTCAACCCAACAGCAATAATGGTGTAGCTGAGCAGATGGCAATCCCTGTGGTACCAATGAGGGTTGGGGGCCTTGATAGTGATAGCCAACAGCGAGGATCTCTCCCCTCAGTTTATGGAAATGGGTAA
Protein Sequence
- >LOC_Os01g24880.2
MGAEEEEEPASAVGREGGGGGGGARAAGAGAGGDTADDDDSGESAAAVVPCSICLDAVVAGGGDRSTARLQCGHEFHLDCIGSAFNAKGVMQCPNCRQIERGNWLYANGSRPSQDVSNDDWGHDEDFYDANQPETSRSVFLPFRFQWCPIGRLAQLPSVFDEGESAPPVTFHDFMGQNFTSEHLPVSAPGATPPGPYIAYFQPLQSSASSSSSHVTERTMDGTTYHDHWNPLPGPSDGRPLATVHPIDFHHNHWTHLPNSYSQPNSNNGVAEQMAIPVVPMRVGGLDSDSQQRGSLPSVYGNG* - >LOC_Os01g24880.1
MGAEEEEEPASAVGREGGGGGGGARAAGAGAGGDTADDDDSGESAAAVVPCSICLDAVVAGGGDRSTARLQCGHEFHLDCIGSAFNAKGVMQCPNCRQIERGNWLYANGSRPSQDVSNDDWGHDEDFYDANQPETSRSVFLPFRFQWCPIGRLAQLPSVFDEGESAPPVTFHDFMGQNFTSEHLPVSAPGATPPGPYIAYFQPLQSSASSSSSHVTERTMDGTTYHDHWNPLPGPSDGRPLATVHPIDFHHNHWTHLPNSYSQPNSNNGVAEQMAIPVVPMRVGGLDSDSQQRGSLPSVYGNG*