Gene Details:

Functional Descriptions:

  • IPI1 promotes the degradation of IPA1 in panicles while it stabilizes IPA1 in shoot apexes.
  • Moreover, IPI1 could ubiquitinate IPA1-mediated complex with different polyubiquitin chains, adding K48-linked polyubiquitin chains in panicles and K63-linked polyubiquitin chains in the shoot apex.
  • Consistent with these findings, the IPI1 loss-of-function mutants showed markedly altered plant architecture, including more tillers, enlarged panicles, and increased yield per plant.
  • These results demonstrate that IPI1 affects plant architecture through precisely tuning IPA1 protein levels in different tissues in rice, and provide new insight into the tissue-specific regulation of plant architecture and important genetic resources for molecular breeding applications.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os01g24880.2
    CTGGTGGACGGACACGGAGCAGATAGCCAGCAGGAGTCCGTCGCCGTTGGTGGGAACGAGACGGTTGCCGCGCCCGCGCGCGAGATCGGAGCTCCGGGGAGGCGAGGCGCAGGCGCAGGTGGGCGCGTGTTCTTCGTCGGGGGCACCCCGTTCGCGCTCTACCGGGAGGGATCCGCGGGGCGGGGAGTGGTGGGGAACGCCGCGAGCGCAGCCGGGATGGGCGCCGAGGAGGAGGAGGAGCCGGCGTCGGCCGTCGGGAGGGAGGGGGGAGGAGGAGGAGGCGGGGCGAGGGCCGCGGGGGCGGGGGCGGGGGGCGACACCGCCGACGACGACGACAGCGGGGAGAGCGCCGCGGCGGTGGTCCCGTGCTCGATCTGCCTCGACGCGGTGGTCGCCGGCGGCGGGGACAGGTCCACGGCGAGGCTGCAGTGCGGCCACGAGTTCCACCTCGATTGCATTGGTTCAGCATTTAATGCCAAAGGAGTTATGCAATGCCCCAACTGTCGCCAAATTGAGAGGGGGAATTGGCTCTATGCAAATGGTTCGCGTCCATCACAGGATGTAAGTAATGATGATTGGGGTCATGATGAAGACTTTTATGATGCTAATCAACCAGAGACATCAAGGAGTGTCTTTTTGCCATTCCGCTTCCAATGGTGTCCTATTGGCCGCTTAGCCCAACTTCCATCTGTATTTGATGAAGGAGAGTCAGCACCACCCGTAACCTTTCATGATTTCATGGGACAGAACTTCACTTCTGAGCATTTGCCTGTATCAGCACCTGGGGCAACTCCTCCAGGCCCATATATCGCTTACTTTCAGCCTCTTCAATCATCGGCATCATCATCAAGTTCCCATGTCACTGAAAGAACTATGGATGGCACCACCTATCATGATCACTGGAACCCCCTACCTGGGCCATCAGATGGTCGACCATTGGCTACAGTGCATCCCATTGATTTCCATCATAACCACTGGACGCACCTGCCCAACTCCTATTCTCAACCCAACAGCAATAATGGTGTAGCTGAGCAGATGGCAATCCCTGTGGTACCAATGAGGGTTGGGGGCCTTGATAGTGATAGCCAACAGCGAGGATCTCTCCCCTCAGTTTATGGAAATGGGTAAGTTTCATTTCTTTCTAAGTTATGAATTGACTGCTTCCTTCAGTAAGACTTGCATGCTGCCTCTATCCAGAGAAAATGCCTACAGTTCTAAGATAAAATTTCTCTGGTAGCCTGTGACAATTGTAGCTAAATTTGATATTTCAGGTGTTATAAACAAAAGGTATCTCATTGACTTATTCTTTAGTGAATATTGTATGCAAACAGAATTAAGTTCCTTTGGACTAAATGTTGACAAAAAAAACCTAGAAGAATGATGATTTTTTTTAATCTTTTCTGCATTATGATTATATGGTAGTTACATTGCCAAAGCTCTGCTGTGGCTATTGGAAAAATAGTTACACCTATGCATGGTTCAGTACCTGCCTTTTTGTTTATTATTGTACGATATATCTTAACGCCTAAGACTCGTGTGTTTTTGGTTTCACAGATCTGGATCAAGGTCTAGAATTCCAAGTGTTCCTCCTATGGCACCACAATTCATGAGGCCGCATGGTAACATCAACGAACAATATCAGCAGAATTCGTCCAGCCTGTATGCTGCGCCGCAGCGTAGGACTGCCGTGCAGGCTGTCCAAGACAGCATGAACTTTACCCTGTTCCCGCAGGCTCCAACTGGCCCTAATTCAATGGAGACGGAGGATGCCGGAGGCAACCAGTTCTATGCCTGGGAGAGGGACCGCTTCGCCCCTTACCCGCTAATGCCCGTAGATTCTGAAGCAAACTGGTGGGGCAGCACGCCGCAATCCCATGGCGTGACGGATCATTCAGCTGCCCCCGGTAGGAGGCTATTTGGTCAATGGATCGGCGCCGGGAGGTCGCCACCGCCGCCTCCACCGCCACCAGCGGACAACTCGTCGTACCGACAGATGCACATCCCTCGGATGTAGCTTAGCCCCCCGACCGTCGCCTGAACCAACAAAGTTAAATATAAGAACCTGGAAAAAACCCCTGTTTGGCTGTAAGAAAGTAGGGTGAAGACACCGGTTGTATGTCGTCCTGTGTTTGCGTGGTAATTAGACTCCCGAGACAAATATGCAGGCAGGTGAAAAAAGAACACCAAGAACGCAAACCCAAACTACCCAAGGAGGAAAAACGTTTCAGCTTGGGTGTTTATGTGGAATTCGGTTCGGTGAAGCATCATAGTACATATTCCAAGCCATGTTGGGGCTTCTTTAAAGTTGTCGCGTGTTTATCGTTTGCTTG
  • >LOC_Os01g24880.1
    CTGGTGGACGGACACGGAGCAGATAGCCAGCAGGAGTCCGTCGCCGTTGGTGGGAACGAGACGGTTGCCGCGCCCGCGCGCGAGATCGGAGCTCCGGGGAGGCGAGGCGCAGGCGCAGGTGGGCGCGTGTTCTTCGTCGGGGGCACCCCGTTCGCGCTCTACCGGGAGGGATCCGCGGGGCGGGGAGTGGTGGGGAACGCCGCGAGCGCAGCCGGGATGGGCGCCGAGGAGGAGGAGGAGCCGGCGTCGGCCGTCGGGAGGGAGGGGGGAGGAGGAGGAGGCGGGGCGAGGGCCGCGGGGGCGGGGGCGGGGGGCGACACCGCCGACGACGACGACAGCGGGGAGAGCGCCGCGGCGGTGGTCCCGTGCTCGATCTGCCTCGACGCGGTGGTCGCCGGCGGCGGGGACAGGTCCACGGCGAGGCTGCAGTGCGGCCACGAGTTCCACCTCGATTGCATTGGTTCAGCATTTAATGCCAAAGGAGTTATGCAATGCCCCAACTGTCGCCAAATTGAGAGGGGGAATTGGCTCTATGCAAATGGTTCGCGTCCATCACAGGATGTAAGTAATGATGATTGGGGTCATGATGAAGACTTTTATGATGCTAATCAACCAGAGACATCAAGGAGTGTCTTTTTGCCATTCCGCTTCCAATGGTGTCCTATTGGCCGCTTAGCCCAACTTCCATCTGTATTTGATGAAGGAGAGTCAGCACCACCCGTAACCTTTCATGATTTCATGGGACAGAACTTCACTTCTGAGCATTTGCCTGTATCAGCACCTGGGGCAACTCCTCCAGGCCCATATATCGCTTACTTTCAGCCTCTTCAATCATCGGCATCATCATCAAGTTCCCATGTCACTGAAAGAACTATGGATGGCACCACCTATCATGATCACTGGAACCCCCTACCTGGGCCATCAGATGGTCGACCATTGGCTACAGTGCATCCCATTGATTTCCATCATAACCACTGGACGCACCTGCCCAACTCCTATTCTCAACCCAACAGCAATAATGGTGTAGCTGAGCAGATGGCAATCCCTGTGGTACCAATGAGGGTTGGGGGCCTTGATAGTGATAGCCAACAGCGAGGATCTCTCCCCTCAGTTTATGGAAATGGGTAAGTTTCATTTCTTTCTAAGTTATGAATTGACTGCTTCCTTCAGTAAGACTTGCATGCTGCCTCTATCCAGAGAAAATGCCTACAGTTCTAAGATAAAATTTCTCTGGTAGCCTGTGACAATTGTAGCTAAATTTGATATTTCAGGTGTTATAAACAAAAGGTATCTCATTGACTTATTCTTTAGTGAATATTGTATGCAAACAGAATTAAGTTCCTTTGGACTAAATGTTGACAAAAAAAACCTAGAAGAATGATGATTTTTTTTAATCTTTTCTGCATTATGATTATATGGTAGTTACATTGCCAAAGCTCTGCTGTGGCTATTGGAAAAATAGTTACACCTATGCATGGTTCAGTACCTGCCTTTTTGTTTATTATTGTACGATATATCTTAACGCCTAAGACTCGTGTGTTTTTGGTTTCACAGATCTGGATCAAGGTCTAGAATTCCAAGTGTTCCTCCTATGGCACCACAATTCATGAGGCCGCATGGTAACATCAACGAACAATATCAGCAGAATTCGTCCAGCCTGTATGCTGCGCCGCAGCGTAGGACTGCCGTGCAGGCTGTCCAAGACAGCATGAACTTTACCCTGTTCCCGCAGGCTCCAACTGGCCCTAATTCAATGGAGACGGAGGATGCCGGAGGCAACCAGTTCTATGCCTGGGAGAGGGACCGCTTCGCCCCTTACCCGCTAATGCCCGTAGATTCTGAAGCAAACTGGTGGGGCAGCACGCCGCAATCCCATGGCGTGACGGATCATTCAGCTGCCCCCGGTAGGAGGCTATTTGGTCAATGGATCGGCGCCGGGAGGTCGCCACCGCCGCCTCCACCGCCACCAGCGGACAACTCGTCGTACCGACAGATGCACATCCCTCGGATGTAGCTTAGCCCCCCGACCGTCGCCTGAACCAACAAAGTTAAATATAAGAACCTGGAAAAAACCCCTGTTTGGCTGTAAGAAAGTAGGGTGAAGACACCGGTTGTATGTCGTCCTGTGTTTGCGTGGTAATTAGACTCCCGAGACAAATATGCAGGCAGGTGAAAAAAGAACACCAAGAACGCAAACCCAAACTACCCAAGGAGGAAAAACGTTTCAGCTTGGGTGTTTATGTGGAATTCGGTTCGGTGAAGCATCATAGTACATATTCCAAGCCATGTTGGGGCTTCTTTAAAGTTGTCGCGTGTTTATCGTTTGCTTG
CDS Sequence
  • >LOC_Os01g24880.2
    ATGGGCGCCGAGGAGGAGGAGGAGCCGGCGTCGGCCGTCGGGAGGGAGGGGGGAGGAGGAGGAGGCGGGGCGAGGGCCGCGGGGGCGGGGGCGGGGGGCGACACCGCCGACGACGACGACAGCGGGGAGAGCGCCGCGGCGGTGGTCCCGTGCTCGATCTGCCTCGACGCGGTGGTCGCCGGCGGCGGGGACAGGTCCACGGCGAGGCTGCAGTGCGGCCACGAGTTCCACCTCGATTGCATTGGTTCAGCATTTAATGCCAAAGGAGTTATGCAATGCCCCAACTGTCGCCAAATTGAGAGGGGGAATTGGCTCTATGCAAATGGTTCGCGTCCATCACAGGATGTAAGTAATGATGATTGGGGTCATGATGAAGACTTTTATGATGCTAATCAACCAGAGACATCAAGGAGTGTCTTTTTGCCATTCCGCTTCCAATGGTGTCCTATTGGCCGCTTAGCCCAACTTCCATCTGTATTTGATGAAGGAGAGTCAGCACCACCCGTAACCTTTCATGATTTCATGGGACAGAACTTCACTTCTGAGCATTTGCCTGTATCAGCACCTGGGGCAACTCCTCCAGGCCCATATATCGCTTACTTTCAGCCTCTTCAATCATCGGCATCATCATCAAGTTCCCATGTCACTGAAAGAACTATGGATGGCACCACCTATCATGATCACTGGAACCCCCTACCTGGGCCATCAGATGGTCGACCATTGGCTACAGTGCATCCCATTGATTTCCATCATAACCACTGGACGCACCTGCCCAACTCCTATTCTCAACCCAACAGCAATAATGGTGTAGCTGAGCAGATGGCAATCCCTGTGGTACCAATGAGGGTTGGGGGCCTTGATAGTGATAGCCAACAGCGAGGATCTCTCCCCTCAGTTTATGGAAATGGGTAA
  • >LOC_Os01g24880.1
    ATGGGCGCCGAGGAGGAGGAGGAGCCGGCGTCGGCCGTCGGGAGGGAGGGGGGAGGAGGAGGAGGCGGGGCGAGGGCCGCGGGGGCGGGGGCGGGGGGCGACACCGCCGACGACGACGACAGCGGGGAGAGCGCCGCGGCGGTGGTCCCGTGCTCGATCTGCCTCGACGCGGTGGTCGCCGGCGGCGGGGACAGGTCCACGGCGAGGCTGCAGTGCGGCCACGAGTTCCACCTCGATTGCATTGGTTCAGCATTTAATGCCAAAGGAGTTATGCAATGCCCCAACTGTCGCCAAATTGAGAGGGGGAATTGGCTCTATGCAAATGGTTCGCGTCCATCACAGGATGTAAGTAATGATGATTGGGGTCATGATGAAGACTTTTATGATGCTAATCAACCAGAGACATCAAGGAGTGTCTTTTTGCCATTCCGCTTCCAATGGTGTCCTATTGGCCGCTTAGCCCAACTTCCATCTGTATTTGATGAAGGAGAGTCAGCACCACCCGTAACCTTTCATGATTTCATGGGACAGAACTTCACTTCTGAGCATTTGCCTGTATCAGCACCTGGGGCAACTCCTCCAGGCCCATATATCGCTTACTTTCAGCCTCTTCAATCATCGGCATCATCATCAAGTTCCCATGTCACTGAAAGAACTATGGATGGCACCACCTATCATGATCACTGGAACCCCCTACCTGGGCCATCAGATGGTCGACCATTGGCTACAGTGCATCCCATTGATTTCCATCATAACCACTGGACGCACCTGCCCAACTCCTATTCTCAACCCAACAGCAATAATGGTGTAGCTGAGCAGATGGCAATCCCTGTGGTACCAATGAGGGTTGGGGGCCTTGATAGTGATAGCCAACAGCGAGGATCTCTCCCCTCAGTTTATGGAAATGGGTAA
Protein Sequence
  • >LOC_Os01g24880.2
    MGAEEEEEPASAVGREGGGGGGGARAAGAGAGGDTADDDDSGESAAAVVPCSICLDAVVAGGGDRSTARLQCGHEFHLDCIGSAFNAKGVMQCPNCRQIERGNWLYANGSRPSQDVSNDDWGHDEDFYDANQPETSRSVFLPFRFQWCPIGRLAQLPSVFDEGESAPPVTFHDFMGQNFTSEHLPVSAPGATPPGPYIAYFQPLQSSASSSSSHVTERTMDGTTYHDHWNPLPGPSDGRPLATVHPIDFHHNHWTHLPNSYSQPNSNNGVAEQMAIPVVPMRVGGLDSDSQQRGSLPSVYGNG*
  • >LOC_Os01g24880.1
    MGAEEEEEPASAVGREGGGGGGGARAAGAGAGGDTADDDDSGESAAAVVPCSICLDAVVAGGGDRSTARLQCGHEFHLDCIGSAFNAKGVMQCPNCRQIERGNWLYANGSRPSQDVSNDDWGHDEDFYDANQPETSRSVFLPFRFQWCPIGRLAQLPSVFDEGESAPPVTFHDFMGQNFTSEHLPVSAPGATPPGPYIAYFQPLQSSASSSSSHVTERTMDGTTYHDHWNPLPGPSDGRPLATVHPIDFHHNHWTHLPNSYSQPNSNNGVAEQMAIPVVPMRVGGLDSDSQQRGSLPSVYGNG*