Information report for OsNF-YC10
Gene Details
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Functional Descriptions
- qRT-PCR and mRNA in situ hybridization analysis revealed that OsNF-YC10 was highly expressed in endosperm and spikelet hull at late developmental stages.
- Cytological experiments revealed significantly reduced cell number of spikelet hull in OsNF-YC10 lines compared with that in WT.
- Taken together, it is suggested that OsNF-YC10 regulates the grains size and shape by influencing the cell proliferation of spikelet hulls.
- These results indicated that OsNF-YC10 plays an important role in determining grain size and shape.
- OsNF-YC10 was further revealed to influence the expression of GW8 (a positive regulator of grain width), GW7 (a negative regulator of grain width) and cell cycle-regulated genes CYCD4, CYCA2.
- The results showed that OsNF-YC10 was a nuclear protein showing transcription activation activity.
Functional Keywords
- spikelet , grain , grain-size , endosperm , cell-cycle , R-protein , cell-proliferation , grain-width
Literature and News
Gene Resources
- UniProt: Q0JMZ9
- EMBL: AP008207
- AlphaFoldDB: Q0JMZ9
- EnsemblPlants: Os01t0346900-01
- Gramene: Os01t0346900-01
- KEGG: dosa:Os01g0346900
- InterPro: IPR007125, IPR009072, IPR050568
- PANTHER: PTHR10252, PTHR10252:SF143
- SUPFAM: SSF47113
- Gene3D: 1.10.20.10
- OrthoDB: Q0JMZ9
- SWISS-MODEL: Q0JMZ9
- Conserved Domain Database: cd22908
Sequences
cDNA Sequence
- >LOC_Os01g24460.1
ATGAAGCAAACTTTGGATGTACATAGATCGTTGAGGCCACCAATGCCAATGGCTCAACAACAAATGGATGAATTTTGGAGGGACCGACAAAAGGAGATTGAGATGACAAAGGACTTCAGTGAGCACATGATCCCTATGGCCCGCTTGAAGAAGATCGTATCTTCTCAAAAGGGTAACATGATGATGACCTTTGACATGCCAGCGTTCTTATCAAAGATGTGTGAGCTCTTTGTACAAGAACTTGCTGCGCGTGCATGGGCATGTGCCCAATCTCATAACCGATGCATCATACTAGACATGGATATTGCTGAAGCCGTAGCCTCTACTGAGTCTTATGACTTTCTTGTTGATATCCTCCACAATCACAGTGTGAAGCAAAAATCCACTCCTTGTTCTTCCACCAAGCGTTGTAGGTTAGTTGATCAACCTTCTACATCTCACATTCCCCACCAACATCTGCTGCCACAGTTTGCTCCTACATATACTTTGGCCATCCCTATTACTCCTAGTTTAATGCCATTAATTTCTCAATGCACACCATCCTCTTTTCCATCCTTGCCACAAGAAAAGTTCCCATTGATGGCACCCACACCCATTGTGAATAGATCAATGTTGTTTATCAATAATATAGCAAGGGGTCTGGGCTTACAAGGAAACAATATCAATGCAGTTGCCAACAATAATATCCTAGACAATATTGTTGGTTGTAGTAGCCCTGCGGTTCTTGCAAGTATGATGAATCCTGCTTTACTTGGGCCTTCAGGGGCACCACTAAATCCTCCAAACTCCCAATCCTACAACTGCACAATGGATATAATTAACTCCAATGATGCTTGTGGTTCCAATAATAGTAGCGTAATTGTTGCAAATCAAGCAAATATTGCTCCCTCTGGCCATTTTTATCCCATTGCCCTTCAGTCCTCATGCTCGACGTTCTTACATAGTAACAACAATGACACGATTACTGCTATACTGGAGGGTGTAGATATTAGCGACATCATGCATGTTACAAGTGATGTTGATGCTGCTACAAAGGTTTTTAGTGGCCAAGAAGAACAACATGAGAAAGAAACTAATGTTGAGTGGCATCATCAAAATGAGATATATGAAAGTATTGATATAAGAATCATCAATGCTACTACTAGAGATGGTAATAAATGTAGTATTAGCTGGGATGAATTGGGAATGGCCGATGATTCGTTGCTAGATAATTTTTTGGAGGAGCTTCAAGTAAGAAAGGATGATGTTTCGGACACCAGGATTGCGTTCAACAAAGACCCATTCCTTGATGATGCTGTCTTGTCAAATCCAAGCACCAGTAATGGCAACAAGTAAATGAGGTGGCAAGTCTTATTCATCCCCTTTTGTAACAATGAAGTTGTAACATTCCTTCTTGTTTAATATACTGTCTTTTGTTTTGAGAG
CDS Sequence
- >LOC_Os01g24460.1
ATGAAGCAAACTTTGGATGTACATAGATCGTTGAGGCCACCAATGCCAATGGCTCAACAACAAATGGATGAATTTTGGAGGGACCGACAAAAGGAGATTGAGATGACAAAGGACTTCAGTGAGCACATGATCCCTATGGCCCGCTTGAAGAAGATCGTATCTTCTCAAAAGGGTAACATGATGATGACCTTTGACATGCCAGCGTTCTTATCAAAGATGTGTGAGCTCTTTGTACAAGAACTTGCTGCGCGTGCATGGGCATGTGCCCAATCTCATAACCGATGCATCATACTAGACATGGATATTGCTGAAGCCGTAGCCTCTACTGAGTCTTATGACTTTCTTGTTGATATCCTCCACAATCACAGTGTGAAGCAAAAATCCACTCCTTGTTCTTCCACCAAGCGTTGTAGGTTAGTTGATCAACCTTCTACATCTCACATTCCCCACCAACATCTGCTGCCACAGTTTGCTCCTACATATACTTTGGCCATCCCTATTACTCCTAGTTTAATGCCATTAATTTCTCAATGCACACCATCCTCTTTTCCATCCTTGCCACAAGAAAAGTTCCCATTGATGGCACCCACACCCATTGTGAATAGATCAATGTTGTTTATCAATAATATAGCAAGGGGTCTGGGCTTACAAGGAAACAATATCAATGCAGTTGCCAACAATAATATCCTAGACAATATTGTTGGTTGTAGTAGCCCTGCGGTTCTTGCAAGTATGATGAATCCTGCTTTACTTGGGCCTTCAGGGGCACCACTAAATCCTCCAAACTCCCAATCCTACAACTGCACAATGGATATAATTAACTCCAATGATGCTTGTGGTTCCAATAATAGTAGCGTAATTGTTGCAAATCAAGCAAATATTGCTCCCTCTGGCCATTTTTATCCCATTGCCCTTCAGTCCTCATGCTCGACGTTCTTACATAGTAACAACAATGACACGATTACTGCTATACTGGAGGGTGTAGATATTAGCGACATCATGCATGTTACAAGTGATGTTGATGCTGCTACAAAGGTTTTTAGTGGCCAAGAAGAACAACATGAGAAAGAAACTAATGTTGAGTGGCATCATCAAAATGAGATATATGAAAGTATTGATATAAGAATCATCAATGCTACTACTAGAGATGGTAATAAATGTAGTATTAGCTGGGATGAATTGGGAATGGCCGATGATTCGTTGCTAGATAATTTTTTGGAGGAGCTTCAAGTAAGAAAGGATGATGTTTCGGACACCAGGATTGCGTTCAACAAAGACCCATTCCTTGATGATGCTGTCTTGTCAAATCCAAGCACCAGTAATGGCAACAAGTAA
Protein Sequence
- >LOC_Os01g24460.1
MKQTLDVHRSLRPPMPMAQQQMDEFWRDRQKEIEMTKDFSEHMIPMARLKKIVSSQKGNMMMTFDMPAFLSKMCELFVQELAARAWACAQSHNRCIILDMDIAEAVASTESYDFLVDILHNHSVKQKSTPCSSTKRCRLVDQPSTSHIPHQHLLPQFAPTYTLAIPITPSLMPLISQCTPSSFPSLPQEKFPLMAPTPIVNRSMLFINNIARGLGLQGNNINAVANNNILDNIVGCSSPAVLASMMNPALLGPSGAPLNPPNSQSYNCTMDIINSNDACGSNNSSVIVANQANIAPSGHFYPIALQSSCSTFLHSNNNDTITAILEGVDISDIMHVTSDVDAATKVFSGQEEQHEKETNVEWHHQNEIYESIDIRIINATTRDGNKCSISWDELGMADDSLLDNFLEELQVRKDDVSDTRIAFNKDPFLDDAVLSNPSTSNGNK*