Gene Details:
- MSU gene ID: LOC_Os01g18170
- RAPdb gene ID: Os01g0284500
- Gene Symbol: OsGER4
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- The ProGER4::GUS reporter line showed that OsGER4 is a hormone-responsive gene involved in various stress responses, mainly confined to epidermal and vascular tissues during CR primordia development and to vascular bundles of mature crown and lateral roots.
- The Germin-like protein OsGER4 is involved in promoting crown root development under exogenous jasmonic acid treatment in rice.
- Phenotyping experiments with OsGER4 knockout mutants confirmed that this gene is required for CR development under exogenous JA treatment.
- Notable changes in OsGER4 expression patterns caused by the polar auxin transport inhibitor NPA support its connection to auxin signaling.
- A subsequent genome-wide association study and gene expression analyses pinpointed a strong association between the Germin-like protein OsGER4 and the increase in CR number under exogenous JA treatment.
Function-related keywords:
- vascular-bundle , root , development , auxin , stress , ja , JA , crown-root-development , root-development , auxin-transport , jasmonic , jasmonic-acid , crown , crown-root , lateral-root , stress-response
Literature:
- The Germin-like protein OsGER4 is involved in promoting crown root development under exogenous jasmonic acid treatment in rice . DOI: 10.1111/tpj.15987 ; PMID: 36134434
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os01g18170.1
TGTGTAGCAGTTCGCCTAGATCCGCATTAAACTAGTCTATCTCCAGCAATTTATGGTTCACGGCTTTGAACTAAATAAGCCGCCTCCCGCGTGTCCACCCCTCTTGCCTCTGCTCCCTTTGTCCACTTGCCGCCTCTCCCCGTACTCCTACCAACTCTTCTCGTCGTCGGCGGCGGCTTCGTCCGGCTCACCGGCCGCTGCATCTCCCTTTGTGTCTTAGTTAGTTTAATCCCATTTACAAATCTTACGTGGTGAACTGATCAATTATTAGTTGAGCTGAGCTGAGCTTATAAGTAGCAGCTGCTCTGATCTGCTCAGCTCGCTTCATCACCTTCCACTCAGTCAATCGCAGCGAGAAGCCAAGAAGCACTCAACCACGCGCTGTTCGTCATGGCGAGGGTACAGCTCTGGGTGGCCGCCGCGTGCGCCGTCGTGCTCGCGCTCGCCGCGCCCTCGCTCGCCGGCGACCCCGACATGCTCCAGGACGTCTGCGTCGCCGACTTGGCGTCCCCGGTGAAGCTGAACGGGTTCCCGTGCAAGGCGAACGTGACGGCGGACGACTTCTTCTTCGCGGGGCTGAAGAACCCCGGCAACACCAACAACCCGGCGGGGTCGAACGTGACGGCGGCGAACGTGCAGTCGTTCCCGGGGGTGAACACGCTGGGCGTGTCTATGGCGAGGATCGACTACGCGCCGGGGGGACAGAACCCGCCGCACACGCACCCGCGCGCCACCGAGATCATCTTCGTCCTCGAGGGCGTCCTCGAGGTGGGCTTCATCACCACTGCCAACAAGCTCTTCACCAAGACTGTCACCGCCGGCGAGGTCTTCGTCTTCCCGCGCGGCCTCGTCCACTTCCAGCAGAACCGCGGCCACGGCCCCGCCGCCGTCATCGCCGCCTTCAACAGCCAGCTCCAGGGCACCCAGGCCATCGCCGCCACGCTCTTCGCCGCCGCGCCGCCCGTGCCGTCCGACGTCCTCGCCAAGGCCTTCCGCGTCGACGTCCCGCAGGTGGACGCCATCAAGGCCAAGTTCAAGTGATCGTAGCCGGCCGCCGTCGATCTCCCATCATTTTCTGCATTTTCTTTCATCAACAAAACCATCTGATCTACTCATTTGATTTGGTTACGGAATAATTTTAGTGGATACTGTCTGTAGCGTGCAGTTGATTTCTTCCGTTTGTAAATCTGTTTGCATTTGTTAATTTGCCTTGGAAATAAGACTTGTTCCGTTTTGTGTGGACTAATCGCTGTATTTTTAGCGCTACAAATTGCTTCTTTCGTTAACTACGTGTAATCGACTGA
CDS Sequence
- >LOC_Os01g18170.1
ATGGCGAGGGTACAGCTCTGGGTGGCCGCCGCGTGCGCCGTCGTGCTCGCGCTCGCCGCGCCCTCGCTCGCCGGCGACCCCGACATGCTCCAGGACGTCTGCGTCGCCGACTTGGCGTCCCCGGTGAAGCTGAACGGGTTCCCGTGCAAGGCGAACGTGACGGCGGACGACTTCTTCTTCGCGGGGCTGAAGAACCCCGGCAACACCAACAACCCGGCGGGGTCGAACGTGACGGCGGCGAACGTGCAGTCGTTCCCGGGGGTGAACACGCTGGGCGTGTCTATGGCGAGGATCGACTACGCGCCGGGGGGACAGAACCCGCCGCACACGCACCCGCGCGCCACCGAGATCATCTTCGTCCTCGAGGGCGTCCTCGAGGTGGGCTTCATCACCACTGCCAACAAGCTCTTCACCAAGACTGTCACCGCCGGCGAGGTCTTCGTCTTCCCGCGCGGCCTCGTCCACTTCCAGCAGAACCGCGGCCACGGCCCCGCCGCCGTCATCGCCGCCTTCAACAGCCAGCTCCAGGGCACCCAGGCCATCGCCGCCACGCTCTTCGCCGCCGCGCCGCCCGTGCCGTCCGACGTCCTCGCCAAGGCCTTCCGCGTCGACGTCCCGCAGGTGGACGCCATCAAGGCCAAGTTCAAGTGA
Protein Sequence
- >LOC_Os01g18170.1
MARVQLWVAAACAVVLALAAPSLAGDPDMLQDVCVADLASPVKLNGFPCKANVTADDFFFAGLKNPGNTNNPAGSNVTAANVQSFPGVNTLGVSMARIDYAPGGQNPPHTHPRATEIIFVLEGVLEVGFITTANKLFTKTVTAGEVFVFPRGLVHFQQNRGHGPAAVIAAFNSQLQGTQAIAATLFAAAPPVPSDVLAKAFRVDVPQVDAIKAKFK*