Gene Details:

Functional Descriptions:

  • In addition, RDD1-AS plants were smaller and flowered later than WT or RDD1-S plants; decreases in grain length, width and 1000-grain weight were also recorded.
  • This study demonstrates that RDD1 is a circadian clock and phy-regulated gene, which is associated with grain size in rice.
  • Circadian clock- and phytochrome-regulated Dof-like gene, RDD1, is associated with grain size in rice.
  • We report here on the characterization of a putative Dof transcription factor gene in rice (Oryza sativa)–rice Dof daily fluctuations 1 (RDD1).
  • Moreover, the overexpression of RDD1 increased nitrogen responsiveness and grain productivity.
  • Our results suggest that RDD1 can contribute to the increased grain productivity of rice via inducing the efficient uptake and accumulation of various nutrient ions.
  • MicroRNA-targeted transcription factor gene RDD1 promotes nutrient ion uptake and accumulation in rice.
  • Here, we show that the transcription factor encoding gene RDD1 plays a role in improving the uptake and accumulation of various nutrient ions in rice.
  • In-frame editing of transcription factor gene RDD1 to suppress miR166 recognition influences nutrient uptake, photosynthesis, and grain quality in rice.
  • The transcription factor-encoding gene RDD1 increases the uptake of nutrient ions, photosynthetic activity under ambient and high CO(2) conditions, and grain productivity, and microRNA166 (miR166) regulates its transcript levels.
  • These results suggest that the in-frame mutagenesis of RDD1 to suppress miR166-RDD1 transcript pairing contributes to the improved grain appearance of rice.

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • >LOC_Os01g15900.1
    AAGAGCAATCCCCTCTGAAATGAAATTTCTCGTGCTCTTTTTTGTTCCCATTTCGTCCCATGCGTAGAGGAGACTAGCTTAGCTAGTTTTATTTCCAAATTAGCCCCTCTCGTCTTCTCTTCTCTCGCCGCTCCGGTCAGCGGCTGCGGCGGCGGCGGCGGAGGATCACGGTGGTTGTCGGGTTGTTGGTGGGTGAGGGGGGATCGAGGATGTGTGACAAGGATCCGGGCATAAAGCTCTTCGGGCGGGTGATCCCGCTGGCTCCAGAGGCTGAGGCTGCTGCGGCGGCGGACGGCTCCGACCAGCCGGAGGCGGCGGCGGCGGCGGCGGCGGAGGTTGAGCCGGCGGCGCAGGATGAGGATCATCACAAGGAAACAGAAGAAAGAAAATATGATGAAATGAAGGTTGATGTGCCACAAGAGGAGGAAGATAACGAAATGAAGGTCGATGCACCACAAGAGAAAAAGGATAATGAAGTGACGGCTGATGTGCCAGAAGAGAAGGGAAATGATGAAATGAGGGTTGATGCATCAGAGTCAATAGAAAGCATAGAGCCAGTCAGCAGATCTACCTTGGACAATAAAAAAGAAGATCAGGGTCAGATGAACAACGTTGAAGAGAAAGCAGCATCAGACTCAAAAGATGAAAATGAAAAGACAGCAAATGATGAATCAGGCCAGGACAAAGTACTTAAGAAGCCAGATAAGATTCTCCCTTGCCCTCGGTGCAACAGTATGGACACAAAGTTTTGTTATTACAACAACTACAATGTTAATCAACCCAGGCACTTCTGTAAGAACTGCCAAAGGTATTGGACTGCCGGGGGAACCATGAGAAATGTACCTGTTGGTGCTGGGAGGCGCAAAAGCAAGAGCTCATCGTTGCACTACCGTCACTTACTGATGGCCCCTGATTGCATGATGGGGTCTAGAGTGGAAATATCCAAGTCAATGAACCCTGAAGCTTTCGCATCTGCGCATTCGACCCCTATACAACCAATTGGCAGAAACGAAACAGTTCTCAAATTTGGGCCTGAGGTGCCACTCTGTGAATCGATGGCATCAGTGCTGAACATTCAGGAGCAGAATGGAACCAATGCTGCAGCAGTACCAACGGGTGAAAATCAGGAAGATAACTCTTGCATCTCTTCAATCACATCACACAACGTGTTACCTGAAAATGCAGCCCAAGTTGACAAGAACAGCACGCCGGTGTATTGCAACGGAGTCGGCCCAGTGCCGCAGTACTACCTTGGAGCTCCTTACATGTACCCATGGAACATAGGATGGAACAACGTTCCTATGATGGTGCCAGGTACAAGCATGCCAGAGTCTGCTTCCCAATCTGAGAGCTGCAGCACCAGTTCAGCTCCATGGATGAACATGAACTCCCCCATGATGCCGGTTGCCTCGAGGCTTTCTGCACCACCATTTCCATACCCTCTAGTGCCACCTGCACTATGGGGTTGCTTATCCAGCTGGCCGGCCACGGCATGGAACATACCGTGGATCAGAACGAATGGCGGCTGCATGTCTCCATCGTCGTCGAGCAACAGCAGCTGTTCAGGCAATGGCTCCCCTCTGGGGAAGCATTCCAGGGACTCCTCTCTCCCACTGAAGGAGGACAAGGAGGAGAAATCACTGTGGGTTCCCAAGACGCTCCGCATCGACGATCCCGACGAGGCGGCGAAGAGCTCCATCTGGGCCACCCTGGGGATCAAGCCTGGAGACCCTGGCATCTTCAAGCCGTTCCAGTCCAAAGGTGAGAGCAAAGGCCAAGCAGCATCAGAGACTCGTCCTGCTCGTGCTCTTAAGGCAAACCCAGCTGCATTGTCGCGGTCGCAGTCGTTCCAGGAGACTTCTTGACTCTTTACCTGTTGAATTTCCTATAGTTTTTGTCAGCACAGTGTGTGTACTGTAAAATGTGTATAGCAGTAGAGGTTTTGCGGTATTCAGAAGGATCAGGAGAGAGCTTTTTGTGCAGCCACTAACTTGAGGTGGATAGGAGTTGCAAAGGGCTTTCATGAGAAACTACATCGAGATGTATATGTATTGTAAATACTTGACAAACTGGTTGTGTACATCTAGGTTAAGTCAGGAAAATACACTCACCTGGTTTAGCTCTCCTAGTATATTATACTACATTGGTATGTCTATCTTTGTTTTTGAAGAAAAAAAAGGAGTGCAAAAGATTCAGATTAATCAATCTAACCACACTTGATTTGATTC
CDS Sequence
  • >LOC_Os01g15900.1
    ATGTGTGACAAGGATCCGGGCATAAAGCTCTTCGGGCGGGTGATCCCGCTGGCTCCAGAGGCTGAGGCTGCTGCGGCGGCGGACGGCTCCGACCAGCCGGAGGCGGCGGCGGCGGCGGCGGCGGAGGTTGAGCCGGCGGCGCAGGATGAGGATCATCACAAGGAAACAGAAGAAAGAAAATATGATGAAATGAAGGTTGATGTGCCACAAGAGGAGGAAGATAACGAAATGAAGGTCGATGCACCACAAGAGAAAAAGGATAATGAAGTGACGGCTGATGTGCCAGAAGAGAAGGGAAATGATGAAATGAGGGTTGATGCATCAGAGTCAATAGAAAGCATAGAGCCAGTCAGCAGATCTACCTTGGACAATAAAAAAGAAGATCAGGGTCAGATGAACAACGTTGAAGAGAAAGCAGCATCAGACTCAAAAGATGAAAATGAAAAGACAGCAAATGATGAATCAGGCCAGGACAAAGTACTTAAGAAGCCAGATAAGATTCTCCCTTGCCCTCGGTGCAACAGTATGGACACAAAGTTTTGTTATTACAACAACTACAATGTTAATCAACCCAGGCACTTCTGTAAGAACTGCCAAAGGTATTGGACTGCCGGGGGAACCATGAGAAATGTACCTGTTGGTGCTGGGAGGCGCAAAAGCAAGAGCTCATCGTTGCACTACCGTCACTTACTGATGGCCCCTGATTGCATGATGGGGTCTAGAGTGGAAATATCCAAGTCAATGAACCCTGAAGCTTTCGCATCTGCGCATTCGACCCCTATACAACCAATTGGCAGAAACGAAACAGTTCTCAAATTTGGGCCTGAGGTGCCACTCTGTGAATCGATGGCATCAGTGCTGAACATTCAGGAGCAGAATGGAACCAATGCTGCAGCAGTACCAACGGGTGAAAATCAGGAAGATAACTCTTGCATCTCTTCAATCACATCACACAACGTGTTACCTGAAAATGCAGCCCAAGTTGACAAGAACAGCACGCCGGTGTATTGCAACGGAGTCGGCCCAGTGCCGCAGTACTACCTTGGAGCTCCTTACATGTACCCATGGAACATAGGATGGAACAACGTTCCTATGATGGTGCCAGGTACAAGCATGCCAGAGTCTGCTTCCCAATCTGAGAGCTGCAGCACCAGTTCAGCTCCATGGATGAACATGAACTCCCCCATGATGCCGGTTGCCTCGAGGCTTTCTGCACCACCATTTCCATACCCTCTAGTGCCACCTGCACTATGGGGTTGCTTATCCAGCTGGCCGGCCACGGCATGGAACATACCGTGGATCAGAACGAATGGCGGCTGCATGTCTCCATCGTCGTCGAGCAACAGCAGCTGTTCAGGCAATGGCTCCCCTCTGGGGAAGCATTCCAGGGACTCCTCTCTCCCACTGAAGGAGGACAAGGAGGAGAAATCACTGTGGGTTCCCAAGACGCTCCGCATCGACGATCCCGACGAGGCGGCGAAGAGCTCCATCTGGGCCACCCTGGGGATCAAGCCTGGAGACCCTGGCATCTTCAAGCCGTTCCAGTCCAAAGGTGAGAGCAAAGGCCAAGCAGCATCAGAGACTCGTCCTGCTCGTGCTCTTAAGGCAAACCCAGCTGCATTGTCGCGGTCGCAGTCGTTCCAGGAGACTTCTTGA
Protein Sequence
  • >LOC_Os01g15900.1
    MCDKDPGIKLFGRVIPLAPEAEAAAAADGSDQPEAAAAAAAEVEPAAQDEDHHKETEERKYDEMKVDVPQEEEDNEMKVDAPQEKKDNEVTADVPEEKGNDEMRVDASESIESIEPVSRSTLDNKKEDQGQMNNVEEKAASDSKDENEKTANDESGQDKVLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKSKSSSLHYRHLLMAPDCMMGSRVEISKSMNPEAFASAHSTPIQPIGRNETVLKFGPEVPLCESMASVLNIQEQNGTNAAAVPTGENQEDNSCISSITSHNVLPENAAQVDKNSTPVYCNGVGPVPQYYLGAPYMYPWNIGWNNVPMMVPGTSMPESASQSESCSTSSAPWMNMNSPMMPVASRLSAPPFPYPLVPPALWGCLSSWPATAWNIPWIRTNGGCMSPSSSSNSSCSGNGSPLGKHSRDSSLPLKEDKEEKSLWVPKTLRIDDPDEAAKSSIWATLGIKPGDPGIFKPFQSKGESKGQAASETRPARALKANPAALSRSQSFQETS*