Information report for OsPOX1;ddOs319
Gene Details
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Functional Descriptions
- Interestingly, at the later vacuolated pollen stage, the GUS activity was highly induced by cold stress, suggesting that OsPOX1 is a flower-preferential cold-responsive gene in rice.
- A full-length cDNA corresponding to ddOs319, previously isolated as a cold-responsive gene in the flowers by mRNA differential display (Plant Cell Rep 26:1097-1110, 2007), was obtained from the cold-treated flowers by reverse transcription and nested PCR.
- Transgenic rice plants expressing P OsPOX1 -GUS showed minimal GUS activity in both shoots and roots at the vegetative stage.
- Cold-Responsive Regulation of a Flower-Preferential Class III Peroxidase Gene, OsPOX1, in Rice (Oryza sativa L.).
Functional Keywords
- cold-stress , flower , shoot , pollen , vegetative , root
Literature and News
- Isolation of cold stress-responsive genes in the reproductive organs, and characterization of the OsLti6b gene from rice (Oryza sativa L.) . DOI: 10.1007/s00299-006-0297-0 ; PMID: 17219102
- Cold-Responsive Regulation of a Flower-Preferential Class III Peroxidase Gene, OsPOX1, in Rice (Oryza sativa L.) . DOI: 10.1007/s12374-011-9194-3
Gene Resources
- UniProt: Q9LI45
- EMBL: AK061583, AK102117, AK243051
- AlphaFoldDB: Q9LI45
- EnsemblPlants: Os01t0263300-01
- Gramene: Os01t0263300-01
- KEGG: osa:4325129
- Orthologous matrix: WSMSFFI
- InterPro: IPR000823, IPR002016, IPR010255
- PANTHER: PTHR31388, PTHR31388:SF54
- SUPFAM: SSF48113
- PROSITE: PS00435, PS00436, PS50873
- Gene3D: 1.10.420.10, 1.10.520.10
- OrthoDB: Q9LI45
- SWISS-MODEL: Q9LI45
- Conserved Domain Database: cd00693
- eggNOG: ENOG502QR5A
Sequences
cDNA Sequence
- >LOC_Os01g15830.1
TTGGAGTTACTATTAGCTGATAATTGATGGAATTACTGAAGCAGTTGAGCACAATGCGTAGCTAGCTGACTTATTTTATACGCATCACCCTAACAACCCAAGCTGCCCTGCCGCGTCTCATCTCACTGTCCTCTGCTCCAAACCACCCTTCCTACATGCACCCCCCCACAGGTGCTATATATGCCACCCCATGCCCGCCTCTTCTCGCCACCCACAACCAAGAGAAGTAGAAACAAACAGAGAGCAATTCTCTTCTCCTACCTAGCAACCTAGTGCAGTGCAGTGCAGTGCAGCGAAGGTTTACTTGGCGACTTCCATGGGTTGCCTGTTGATGCTCTGCTTGGTTTCTCCCCTCCTCCTCGCCACCTCTGTCCACGGCAACCCGTGGTATGGGTATGGGTATGGCTTGTTCCCGCAGTTCTACGACCACTCGTGCCCCAAGGCGAAGGAGATCGTGCAGTCCATCGTAGCACAGGCGGTGGCCAGGGAGACCAGGATGGCGGCATCCTTGGTCAGGCTGCATTTTCATGACTGCTTTGTCAAGGGGTGTGACGCGTCTGTGCTCCTGGACAACAGCACCACCATCATCAGTGAGAAGGGGTCAAACCCTAACATGAACTCCCTCAGGGGTTTCGAGGTCGTCGACGAGATCAAGGCCGCCCTCGAAGCAGCTTGCCCCGGCACCGTCTCCTGCGCCGACATACTCGCCCTCGCTGCACGCGATTCCACTGTCCTCGTTGGTGGCCCGTACTGGGATGTGCCACTTGGCCGGAGGGACTCACTGGGTGCCAGCATCCAGGGCTCCAACAACGACATCCCAGCTCCCAACAACACCCTCCCCACCATCATCACCAAGTTCAAGCGCCAGGGCCTTAACATCGTCGACGTCGTAGCCCTCTCAGGTGGCCACACCATTGGCATGTCTCGGTGCACCAGCTTCCGTCAGAGGCTCTACAATCAGAGCGGCAATGGCATGGCTGACTACACACTGGATGTGTCCTACGCGGCACAGCTGAGGCAGGGATGCCCCCGTTCTGGTGGTGACAACAACCTCTTCCCGCTAGACTTTGTCAGCCCCGCAAAGTTCGACAACTTCTACTTCAAGAACATCCTGTCTGGCAAGGGCCTTCTCAGCTCTGATCAGGTCCTGCTTACCAAGAGCGCTGAAACAGCGGCGCTCGTGAAGGCGTATGCTGATGATGTCAACCTCTTCTTCAAGCACTTCGCACAGTCAATGGTGAATATGGGCAACATCTCGCCTCTGACTGGATCACAGGGGGAGATCAGGAAGAACTGCAGGAGGCTCAACAACTACTACCACTGAGGTTGTCTTGTGTGCTGAGTTTTACAAGGTGGTGGTAGTGGCATGTTTTGTTTAAATAAGTAAAGCTGGTTGTAATGCGTCAAGGCTGTTTGATCATTTGTGTTATTGTGATTGCGTTGCAAAACGTGTATGTTTAATAATTCAATATATAAAATGAGTTCATTTGGTTGTTCTAGA
CDS Sequence
- >LOC_Os01g15830.1
ATGGGTTGCCTGTTGATGCTCTGCTTGGTTTCTCCCCTCCTCCTCGCCACCTCTGTCCACGGCAACCCGTGGTATGGGTATGGGTATGGCTTGTTCCCGCAGTTCTACGACCACTCGTGCCCCAAGGCGAAGGAGATCGTGCAGTCCATCGTAGCACAGGCGGTGGCCAGGGAGACCAGGATGGCGGCATCCTTGGTCAGGCTGCATTTTCATGACTGCTTTGTCAAGGGGTGTGACGCGTCTGTGCTCCTGGACAACAGCACCACCATCATCAGTGAGAAGGGGTCAAACCCTAACATGAACTCCCTCAGGGGTTTCGAGGTCGTCGACGAGATCAAGGCCGCCCTCGAAGCAGCTTGCCCCGGCACCGTCTCCTGCGCCGACATACTCGCCCTCGCTGCACGCGATTCCACTGTCCTCGTTGGTGGCCCGTACTGGGATGTGCCACTTGGCCGGAGGGACTCACTGGGTGCCAGCATCCAGGGCTCCAACAACGACATCCCAGCTCCCAACAACACCCTCCCCACCATCATCACCAAGTTCAAGCGCCAGGGCCTTAACATCGTCGACGTCGTAGCCCTCTCAGGTGGCCACACCATTGGCATGTCTCGGTGCACCAGCTTCCGTCAGAGGCTCTACAATCAGAGCGGCAATGGCATGGCTGACTACACACTGGATGTGTCCTACGCGGCACAGCTGAGGCAGGGATGCCCCCGTTCTGGTGGTGACAACAACCTCTTCCCGCTAGACTTTGTCAGCCCCGCAAAGTTCGACAACTTCTACTTCAAGAACATCCTGTCTGGCAAGGGCCTTCTCAGCTCTGATCAGGTCCTGCTTACCAAGAGCGCTGAAACAGCGGCGCTCGTGAAGGCGTATGCTGATGATGTCAACCTCTTCTTCAAGCACTTCGCACAGTCAATGGTGAATATGGGCAACATCTCGCCTCTGACTGGATCACAGGGGGAGATCAGGAAGAACTGCAGGAGGCTCAACAACTACTACCACTGA
Protein Sequence
- >LOC_Os01g15830.1
MGCLLMLCLVSPLLLATSVHGNPWYGYGYGLFPQFYDHSCPKAKEIVQSIVAQAVARETRMAASLVRLHFHDCFVKGCDASVLLDNSTTIISEKGSNPNMNSLRGFEVVDEIKAALEAACPGTVSCADILALAARDSTVLVGGPYWDVPLGRRDSLGASIQGSNNDIPAPNNTLPTIITKFKRQGLNIVDVVALSGGHTIGMSRCTSFRQRLYNQSGNGMADYTLDVSYAAQLRQGCPRSGGDNNLFPLDFVSPAKFDNFYFKNILSGKGLLSSDQVLLTKSAETAALVKAYADDVNLFFKHFAQSMVNMGNISPLTGSQGEIRKNCRRLNNYYH*