Gene Details:

Functional Descriptions:

  • In this study, we report a novel rice (Oryza sativa) mutant called substandard starch grain4 (SSG4) that develops enlarged SGs in the endosperm.
  • Enlargement of SGs in SSG4 was also observed in other starch-accumulating tissues such as pollen grains, root caps, and young pericarps.
  • SSG4 will be a useful molecular tool for future starch breeding and biotechnology.
  • The results of this study suggest that SSG4 influences the regulation of starch and lipid metabolism as well as amyloplast development, a finding that is useful for potential genetic improvement of rice grain quality in future starch and lipid breeding and biotechnology.

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • >LOC_Os01g08420.1
    GGAATTAAACTTAACCAACTTATGCTGGCACCACAATCTACTGGTTTTCTTTCCATATCACCAGATTCTATAATGTTAAATGCTACAGGCAGACCCGATGAAAATTTTTCCATAGAAGTGAATGTGCCATTATTTTTTGGCACACACGAGGCCATTCAAGACGGAAGGCTGTTGTCAATATTCCTCCAAAAGGGGCAGCTGAGATCTAATATCTGCTATCACCCTGAAAATTTGACTAGTTTGGAGGTTCGAAATTTGCCACTTGATGAGCTGGAGTTTGCTTCATTACGTGGGTTTGTTCAGAAGGCAGAACTCCAGCTTAATTTCCAGAAAAGAAGAGGTCATGGTTTGCTGTCAGTTATCCGCCCAAAATTTAGTGGCATGCTTGGGGAATCACTTGATATAGCTGCTCGATGGAGTGGTGATGTTATTACTATGGAAAAATCAGTCCTAGAGCAAGCTAATAGCAAGTATGAACTTCAAGGGGAGTATGTTTTTCCTGGAACACGTGATAGATTCCCTATGGAAAGTCAGAGTAATGGTTTCATAGAGAAAGCGATGGGAGGGCATCTTGGTAGCATGATGTCTTCGATGGGCAGGTGGAGGATGAGATTAGAAGTACCTGGTGCTGAAGTAGCTGAAATGCTTCCGTTGGCAAGACTTCTATCACGAAGTACAGACCCAGCTATTCGTTCCAGATCAAAGGAACTTTTTATGCAAACTTTGCATTCTGTTGGATTCAATGCTGAAAGTCTTCGTGACCAGCTAAAGGCATTAGAAATGTATCCTGATTGGTTGGATGATGATACAATTGAGGATATAACTCTTCCTGGCTTAGCTGAACTGAGAGGTTATTGGCGTGGTTCTCTTGATGCCAGTGGTGGAGGGAACGGCGATACTATGGCTGATTTTGATTTCAATGGTGAAGATTGGGAGTGGGGCACTTACAAGACACAGCGTGTTCTGGCATCTGGTTCATTCAGCAATAATGATGGCCTGCGTCTTGATAAGTTATTTATTCAGAAGGATAATGCCACTCTTCATGCTGATGGATCAATTCTTGGCCCATTAACAAATCTTCACTTTGCTGTGCTTAATTTCCCAGTTGGTCTTATACCCGCATTAGTTCAGGCTATAGAATCATCAACCACAGACTCGATTCATTTTCTGAGGCAATGGTTGACACCAATCAAAGGCATTCTACATATGGAGGGAGATTTGAGAGGTACTCTAGCAAAGCCTGAATGTGATGTTCAAATAAGACTTCTTGATGGCACCATTGGAGGCATTGATCTCGGAAGAGCTGAAGTATTAGCTTCTGTAACCCCAACAAGCCGTTTTGTTTTTGATGCAAACTTCGAACCGACCATACAAAGTGGGCACGTTAACATTCAAGGTAGTGTTCCTGTTACTTATGTAGACAGCAACTCCATTGAGGAAGACCTGGAAGGGGGAGATGGTAAACAAGGTATAATAAGAATCCCTGTTTGGGCGAAAGACAGAGGCTTGACAAATGACATCAGCGAAACAAGAATCATGAGAGACAAGCCTGATGAGGGTTGGGAGTTTCAATTAGCTGAAAGCCTAAAGGGTTTAAGCTGGAATATGCTAGAACCAGGCGAAGTGAGAATAAATGCAGATATAAAGGATGGGGGTATGACACTGATAACTGCACTGAGTCCTTACTCAAACTGGCTTCAAGGCTATGCTGAAGTTCTTCTCCAGGTTAAAGGCACTGTTGATCACCCTGTTGTTGATGGGTCTGCCTCATTTCACCGTGCAACCGTGGCTTCTCCTTTCCTTCGGACACCACTGACAAATTTCGCTGGCAATGTTCATGTTATATCTAACAGACTATGTATCAGTTCCATGGAAAGCAGAGTTGGGAGGAAAGGGAGATTGTCAATGAAAGGGACTCTACCTCTCCACAATATTGAGCCATCAGCCAATGACAAGATTGAACTGAAATGCGAAGTTCTGGACATACGAGCAAAAAATATTTTGAGTGGCCAAGTAGACAGCCAGCTGCAGGTTACAGGCTCAATATTGCGGCCAGATGTCTCTGGAATGATTCGGCTAAGCCATGGTGAAGCGTATTTGCCTCATGATAAAGGCAATGGTGCTGTTGCCACCAGGCTGTCTTCAAATAAATCCATCTCTGTTCCTGCTGGTTTTGACCAAAGAACAGTCTCACGAGATGTCTCCCACTTTCTAGGATCACTATCAACTAGTCCAGACGGCCAACAATCAGAAACTGAAAGGACTCCTGAACATGGAAGTTTTAAGCCAAACATTGATGCCCGACTCAATGATCTGAAGCTCACATTTGGACCTGAATTAAGGATTGTTTATCCTTTAATTTTGAATTTTGCTGTGAGTGGCGACCTTGAGCTTAATGGCATGGTTCATCCGAAGTACATAAGACCTAAGGGTGTCTTAACTTTTGAAAATGGTGAGGTCAATTTGGTTGCTACTCAGGTAAGACTTAAAAATGATCATTTGAATGTAGCAAAGTTTGAGCCAGATCTTGGTTTGGATCCTATTCTGGATCTTGTTCTTGTTGGATCTGAGTGGCAATTTAAGATCCAAAGTCGAGCAAGCATGTGGCAAGACAATCTTGTTGTAACCTCCACACGCTCTGTGGACCAGGATGTTCTTTCACCTAGTGAGGCTGCAAAGGTTTTTGAGTCACAGCTTGCGGAGTCACTATTGGAAGGTGATGGACAGCTCGCGTTCAAGAAACTCGCAACTGCAACACTCGAAACTTTGATGCCAAGGATTGAAGGCAAGGGTGAATTTGGTCAAGCACGGTGGCGACTGGTTTATGCACCGCAGATTCCGAGTTTACTATCTGTAGATCCAACGGTTGACCCACTTAAATCGCTGGCAAACAATATATCTTTTGCTACTGAGGTCGAAGTGCAACTTGGAAAACGCCTTCAGGCCTCTGTTGTCAGGCAGATGAAAGATTCAGAAATGGCAATGCAGTGGTCACTCATATATCAGCTAACCAGCAGGCTCCGTGTTCTCTTCCAATCTACGCCGTCCAATCGACTTCTCTTCGAGTACTCTGCAACATCCCAGGGTTGATTCATTTTTGCCCACTACACAGAGCAGGAGCTGTGGAATGGCAGCTGGTCTGTACAAAGATGTGGCGCACCGACACCGATCAATTGTTCTTGTAGATAATGGAAGTTTTGATAGGCAGGCAGTTGTACATGTAGACTTGCTGATGTTTTTGCTCTTTGTTGTATCTACATTCTTTTTCTCGGAAACAAAGTTTCTGGGTTTGTACATAGGTAGCAAATTTTAGCTCCTTTAGCTAGTTAACGTAAGATGTAAAGAACTACCTGCATAAATTATATGAAAATTTCCAATCTCGTGGAGTCGA
CDS Sequence
  • >LOC_Os01g08420.1
    ATGCTGGCACCACAATCTACTGGTTTTCTTTCCATATCACCAGATTCTATAATGTTAAATGCTACAGGCAGACCCGATGAAAATTTTTCCATAGAAGTGAATGTGCCATTATTTTTTGGCACACACGAGGCCATTCAAGACGGAAGGCTGTTGTCAATATTCCTCCAAAAGGGGCAGCTGAGATCTAATATCTGCTATCACCCTGAAAATTTGACTAGTTTGGAGGTTCGAAATTTGCCACTTGATGAGCTGGAGTTTGCTTCATTACGTGGGTTTGTTCAGAAGGCAGAACTCCAGCTTAATTTCCAGAAAAGAAGAGGTCATGGTTTGCTGTCAGTTATCCGCCCAAAATTTAGTGGCATGCTTGGGGAATCACTTGATATAGCTGCTCGATGGAGTGGTGATGTTATTACTATGGAAAAATCAGTCCTAGAGCAAGCTAATAGCAAGTATGAACTTCAAGGGGAGTATGTTTTTCCTGGAACACGTGATAGATTCCCTATGGAAAGTCAGAGTAATGGTTTCATAGAGAAAGCGATGGGAGGGCATCTTGGTAGCATGATGTCTTCGATGGGCAGGTGGAGGATGAGATTAGAAGTACCTGGTGCTGAAGTAGCTGAAATGCTTCCGTTGGCAAGACTTCTATCACGAAGTACAGACCCAGCTATTCGTTCCAGATCAAAGGAACTTTTTATGCAAACTTTGCATTCTGTTGGATTCAATGCTGAAAGTCTTCGTGACCAGCTAAAGGCATTAGAAATGTATCCTGATTGGTTGGATGATGATACAATTGAGGATATAACTCTTCCTGGCTTAGCTGAACTGAGAGGTTATTGGCGTGGTTCTCTTGATGCCAGTGGTGGAGGGAACGGCGATACTATGGCTGATTTTGATTTCAATGGTGAAGATTGGGAGTGGGGCACTTACAAGACACAGCGTGTTCTGGCATCTGGTTCATTCAGCAATAATGATGGCCTGCGTCTTGATAAGTTATTTATTCAGAAGGATAATGCCACTCTTCATGCTGATGGATCAATTCTTGGCCCATTAACAAATCTTCACTTTGCTGTGCTTAATTTCCCAGTTGGTCTTATACCCGCATTAGTTCAGGCTATAGAATCATCAACCACAGACTCGATTCATTTTCTGAGGCAATGGTTGACACCAATCAAAGGCATTCTACATATGGAGGGAGATTTGAGAGGTACTCTAGCAAAGCCTGAATGTGATGTTCAAATAAGACTTCTTGATGGCACCATTGGAGGCATTGATCTCGGAAGAGCTGAAGTATTAGCTTCTGTAACCCCAACAAGCCGTTTTGTTTTTGATGCAAACTTCGAACCGACCATACAAAGTGGGCACGTTAACATTCAAGGTAGTGTTCCTGTTACTTATGTAGACAGCAACTCCATTGAGGAAGACCTGGAAGGGGGAGATGGTAAACAAGGTATAATAAGAATCCCTGTTTGGGCGAAAGACAGAGGCTTGACAAATGACATCAGCGAAACAAGAATCATGAGAGACAAGCCTGATGAGGGTTGGGAGTTTCAATTAGCTGAAAGCCTAAAGGGTTTAAGCTGGAATATGCTAGAACCAGGCGAAGTGAGAATAAATGCAGATATAAAGGATGGGGGTATGACACTGATAACTGCACTGAGTCCTTACTCAAACTGGCTTCAAGGCTATGCTGAAGTTCTTCTCCAGGTTAAAGGCACTGTTGATCACCCTGTTGTTGATGGGTCTGCCTCATTTCACCGTGCAACCGTGGCTTCTCCTTTCCTTCGGACACCACTGACAAATTTCGCTGGCAATGTTCATGTTATATCTAACAGACTATGTATCAGTTCCATGGAAAGCAGAGTTGGGAGGAAAGGGAGATTGTCAATGAAAGGGACTCTACCTCTCCACAATATTGAGCCATCAGCCAATGACAAGATTGAACTGAAATGCGAAGTTCTGGACATACGAGCAAAAAATATTTTGAGTGGCCAAGTAGACAGCCAGCTGCAGGTTACAGGCTCAATATTGCGGCCAGATGTCTCTGGAATGATTCGGCTAAGCCATGGTGAAGCGTATTTGCCTCATGATAAAGGCAATGGTGCTGTTGCCACCAGGCTGTCTTCAAATAAATCCATCTCTGTTCCTGCTGGTTTTGACCAAAGAACAGTCTCACGAGATGTCTCCCACTTTCTAGGATCACTATCAACTAGTCCAGACGGCCAACAATCAGAAACTGAAAGGACTCCTGAACATGGAAGTTTTAAGCCAAACATTGATGCCCGACTCAATGATCTGAAGCTCACATTTGGACCTGAATTAAGGATTGTTTATCCTTTAATTTTGAATTTTGCTGTGAGTGGCGACCTTGAGCTTAATGGCATGGTTCATCCGAAGTACATAAGACCTAAGGGTGTCTTAACTTTTGAAAATGGTGAGGTCAATTTGGTTGCTACTCAGGTAAGACTTAAAAATGATCATTTGAATGTAGCAAAGTTTGAGCCAGATCTTGGTTTGGATCCTATTCTGGATCTTGTTCTTGTTGGATCTGAGTGGCAATTTAAGATCCAAAGTCGAGCAAGCATGTGGCAAGACAATCTTGTTGTAACCTCCACACGCTCTGTGGACCAGGATGTTCTTTCACCTAGTGAGGCTGCAAAGGTTTTTGAGTCACAGCTTGCGGAGTCACTATTGGAAGGTGATGGACAGCTCGCGTTCAAGAAACTCGCAACTGCAACACTCGAAACTTTGATGCCAAGGATTGAAGGCAAGGGTGAATTTGGTCAAGCACGGTGGCGACTGGTTTATGCACCGCAGATTCCGAGTTTACTATCTGTAGATCCAACGGTTGACCCACTTAAATCGCTGGCAAACAATATATCTTTTGCTACTGAGGTCGAAGTGCAACTTGGAAAACGCCTTCAGGCCTCTGTTGTCAGGCAGATGAAAGATTCAGAAATGGCAATGCAGTGGTCACTCATATATCAGCTAACCAGCAGGCTCCGTGTTCTCTTCCAATCTACGCCGTCCAATCGACTTCTCTTCGAGTACTCTGCAACATCCCAGGGTTGA
Protein Sequence
  • >LOC_Os01g08420.1
    MLAPQSTGFLSISPDSIMLNATGRPDENFSIEVNVPLFFGTHEAIQDGRLLSIFLQKGQLRSNICYHPENLTSLEVRNLPLDELEFASLRGFVQKAELQLNFQKRRGHGLLSVIRPKFSGMLGESLDIAARWSGDVITMEKSVLEQANSKYELQGEYVFPGTRDRFPMESQSNGFIEKAMGGHLGSMMSSMGRWRMRLEVPGAEVAEMLPLARLLSRSTDPAIRSRSKELFMQTLHSVGFNAESLRDQLKALEMYPDWLDDDTIEDITLPGLAELRGYWRGSLDASGGGNGDTMADFDFNGEDWEWGTYKTQRVLASGSFSNNDGLRLDKLFIQKDNATLHADGSILGPLTNLHFAVLNFPVGLIPALVQAIESSTTDSIHFLRQWLTPIKGILHMEGDLRGTLAKPECDVQIRLLDGTIGGIDLGRAEVLASVTPTSRFVFDANFEPTIQSGHVNIQGSVPVTYVDSNSIEEDLEGGDGKQGIIRIPVWAKDRGLTNDISETRIMRDKPDEGWEFQLAESLKGLSWNMLEPGEVRINADIKDGGMTLITALSPYSNWLQGYAEVLLQVKGTVDHPVVDGSASFHRATVASPFLRTPLTNFAGNVHVISNRLCISSMESRVGRKGRLSMKGTLPLHNIEPSANDKIELKCEVLDIRAKNILSGQVDSQLQVTGSILRPDVSGMIRLSHGEAYLPHDKGNGAVATRLSSNKSISVPAGFDQRTVSRDVSHFLGSLSTSPDGQQSETERTPEHGSFKPNIDARLNDLKLTFGPELRIVYPLILNFAVSGDLELNGMVHPKYIRPKGVLTFENGEVNLVATQVRLKNDHLNVAKFEPDLGLDPILDLVLVGSEWQFKIQSRASMWQDNLVVTSTRSVDQDVLSPSEAAKVFESQLAESLLEGDGQLAFKKLATATLETLMPRIEGKGEFGQARWRLVYAPQIPSLLSVDPTVDPLKSLANNISFATEVEVQLGKRLQASVVRQMKDSEMAMQWSLIYQLTSRLRVLFQSTPSNRLLFEYSATSQG*