Gene Details:

Functional Descriptions:

  • The transcription factor OsbHLH035 mediates seed germination and enables seedling recovery from salt stress through ABA-dependent and ABA-independent pathways, respectively.
  • The bHLH TF OsbHLH035 is a salt-induced gene that is primarily expressed in germinating seeds and seedlings.
  • Moreover, OsbHLH035 mutant seedlings are unable to recover from salt-stress treatment.
  • Consistently, sodium is over-accumulated in aerial tissues but slightly reduced in terrestrial tissues from OsbHLH035 seedlings after salt treatment.
  • Furthermore, genetic complementation can restore both the delayed seed germination and the impaired recovery of salt-treated OsbHLH035 seedlings to normal growth.
  • OsbHLH035 mediates seed germination and seedling recovery after salt stress relief through the ABA-dependent and ABA-independent activation of OsHKT pathways, respectively.
  • OsbHLH035 mutants show delayed seed germination, particularly under salt-stress conditions.
  • The expression of OsbHLH035 is induced by drought and salinity.
  • In parallel, abscisic acid (ABA) contents are over-accumulated, and the expression of the ABA biosynthetic genes OsABA2 and OsAAO3 is upregulated; furthermore, compared with that in wild-type (WT) seedlings, the salt-induced expression of OsABA8ox1, an ABA catabolic gene, in germinating OsbHLH035 mutant seeds is downregulated.
  • Stable expression of GFP-fused OsbHLH035 in rice transgenic plants revealed that this protein is predominantly localized to the nucleus.
  • Tightly controlled expression of OsbHLH35 is critical for anther development in rice.
  • Our data suggest that OsbHLH35 plays an essential role in anther development in rice and the fine control of its expression is crucial to ensure proper seed production.
  • Rice transgenic plants expressing GUS reporter gene under the control of OsbHLH35 promoter (pOsbHLH35::GUS) showed that this TF specifically accumulates in anthers at the meiosis stage and in other spikelet tissues.
  • Plants overexpressing OsbHLH35 presented small and curved anthers, leading to a reduction of 72 % on seed production.
  • Yeast one-hybrid screening identified three members of the Growth-Regulating Factor (GRF) family, OsGRF3, OsGRF4, and OsGRF11, as transcriptional regulators of OsbHLH35.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os01g06640.3
    AGAACACTTAGCATACCAATTATCATGTACATGAAGTGATCAAATCTCACCCACAAGCATATCTCTCGCACCATTCCACCCTATAGAAACGAGATAACAAGACGCTGTTTGCACTAGCTATTTGACAGCCGACAAGAACCAGTTAGGTAAAACTCAGTAGGATGCAGGTTTGAATGGCTGAATGCCAACCTCTGCAACTGCAAGAAGGCAAGAAACTGCAAGAGCTGCAGCCATACGATGGCTGCAATCCTTCAGTGTACAGAGGCCCAATTCTGCTGCCCCGGCAGGCCAACTCGGCGCCGCCGGCCGTGCCGCCGGAGATGTCGTCCTCGTCGGGGTCAGGGAGAAGCGCGACGGAGGCGAGAGCGTTGAAGATCCACAGCGAGGCTGAACGGCGGCGGCGAGAGAGGATCAATGCTCATCTGACAACACTGAGGAGAATGATCCCTGATACTAAGCAGGTTTGTGCAAGTTTTTACCGTTGTGAAGCATTCAGAAAGAAAAAAAATATGCATCAACATCTGAGCCATTTCAGAGAGTTTGCTCGCAGTTCAACTTTAAACTTTTTTTGTGATCTTGTTAGCTAACATAATTGTTGAAGCTAAAGATGAGAGAGGTTAGATATCTATTTAAAAAACTGTTTTTCTGTCGTAGTTCGTGTAGAACTTTGATACTTGCAAGAAAGTCGAAACCAAGAAAAAGTCATCTGAAAGAAATCTTCAGGCTCACATTTGTTCACATTTCAACACTCCTTTTCTAATAAGTTTGGAATTCCCTCACAGGACAAATGCTACAAGCCTAGAATGCCATGACTCCTGAACACAAATTTTCTTAAAAAAATTTCTGCACTGCAGATGGACAAGGCCACCTTGTTAGCCAGAGTGGTGGACCAAGTGAAGGATCTGAAGAGGAAAGCAAGTGAGATCACACAAAGAACACCTCTCCCTCCAGAGACCAACGAAGTCTCCATCGAATGCTTCACCGGAGACGCTGCCACCGCCGCCACCACTGTCGCCGGCAACCACAAGACCTTGTACATCAAGGCTTCCATCAGCTGCGACGACCGGCCGGACCTCATCGCCGGGATCACCCACGCATTCCATGGCCTGAGGCTGAGGACGGTCAGAGCAGAGATGACATCACTGGGAGGAAGGGTGCAGCATGTGTTCATATTGTGCAGGGAGGAAGGCATTGCAGGTGGTGTGAGCCTCAAGTCTCTGAAGGAGGCTGTCAGGCAGGCACTAGCCAAGGTTGCCTCTCCTGAATTGGTATATGGCAGCAGTCACTTTCAGAGCAAGAGGCAGAGGATCCTGGAGTCACATTGCTCAATTATGTCCATATAGATTTGTTCCTCTTCTGGGGATTTTGATTTTATTTTTCTACTAGCTGAGAATATGTATGAAATAAGAGAGAGAATCTTCTTCTTCTGAGAGCTATATAGGCCTGAGAATTGTGTGCCTGAAATTGCTGTGAAAGAATTGATGTCTGAACTGTTGCTAGTGCTAGTGGTTGCAATCAACTGACAAGATCATATGGCACAGGGTTTGCATTGTGTATGACTGTGTGTACAGAAATATTCTTCTGGGAAGTCACATGATAAGCTTGACAAT
  • >LOC_Os01g06640.1
    AGAACACTTAGCATACCAATTATCATGTACATGAAGTGATCAAATCTCACCCACAAGCATATCTCTCGCACCATTCCACCCTATAGAAACGAGATAACAAGACGCTGTTTGCACTAGCTATTTGACAGCCGACAAGAACCAGTTAGGTAAAACTCAGTAGGATGCAGGTTTGAATGGCTGAATGCCAACCTCTGCAACTGCAAGAAGGCAAGAAACTGCAAGAGCTGCAGCCATACGATGGCTGCAATCCTTCAGTGTACAGAGGCCCAATTCTGCTGCCCCGGCAGGCCAACTCGGCGCCGCCGGCCGTGCCGCCGGAGATGTCGTCCTCGTCGGGGTCAGGGAGAAGCGCGACGGAGGCGAGAGCGTTGAAGATCCACAGCGAGGCTGAACGGCGGCGGCGAGAGAGGATCAATGCTCATCTGACAACACTGAGGAGAATGATCCCTGATACTAAGCAGGTTTGTGCAAGTTTTTACCGTTGTGAAGCATTCAGAAAGAAAAAAAATATGCATCAACATCTGAGCCATTTCAGAGAGTTTGCTCGCAGTTCAACTTTAAACTTTTTTTGTGATCTTGTTAGCTAACATAATTGTTGAAGCTAAAGATGAGAGAGGTTAGATATCTATTTAAAAAACTGTTTTTCTGTCGTAGTTCGTGTAGAACTTTGATACTTGCAAGAAAGTCGAAACCAAGAAAAAGTCATCTGAAAGAAATCTTCAGGCTCACATTTGTTCACATTTCAACACTCCTTTTCTAATAAGTTTGGAATTCCCTCACAGGACAAATGCTACAAGCCTAGAATGCCATGACTCCTGAACACAAATTTTCTTAAAAAAATTTCTGCACTGCAGATGGACAAGGCCACCTTGTTAGCCAGAGTGGTGGACCAAGTGAAGGATCTGAAGAGGAAAGCAAGTGAGATCACACAAAGAACACCTCTCCCTCCAGAGACCAACGAAGTCTCCATCGAATGCTTCACCGGAGACGCTGCCACCGCCGCCACCACTGTCGCCGGCAACCACAAGACCTTGTACATCAAGGCTTCCATCAGCTGCGACGACCGGCCGGACCTCATCGCCGGGATCACCCACGCATTCCATGGCCTGAGGCTGAGGACGGTCAGAGCAGAGATGACATCACTGGGAGGAAGGGTGCAGCATGTGTTCATATTGTGCAGGGAGGAAGGCATTGCAGGTGGTGTGAGCCTCAAGTCTCTGAAGGAGGCTGTCAGGCAGGCACTAGCCAAGGTTGCCTCTCCTGAATTGGTATATGGCAGCAGTCACTTTCAGAGCAAGAGGCAGAGGATCCTGGAGTCACATTGCTCAATTATGTCCATATAGATTTGTTCCTCTTCTGGGGATTTTGATTTTATTTTTCTACTAGCTGAGAATATGTATGAAATAAGAGAGAGAATCTTCTTCTTCTGAGAGCTATATAGGCCTGAGAATTGTGTGCCTGAAATTGCTGTGAAAGAATTGATGTCTGAACTGTTGCTAGTGCTAGTGGTTGCAATCAACTGACAAGATCATATGGCACAGGGTTTGCATTGTGTATGACTGTGTGTACAGAAATATTCTTCTGGGAAGTCACATGATAAGCTTGACAAT
  • >LOC_Os01g06640.2
    AGAACACTTAGCATACCAATTATCATGTACATGAAGTGATCAAATCTCACCCACAAGCATATCTCTCGCACCATTCCACCCTATAGAAACGAGATAACAAGACGCTGTTTGCACTAGCTATTTGACAGCCGACAAGAACCAGTTAGGTAAAACTCAGTAGGATGCAGGTTTGAATGGCTGAATGCCAACCTCTGCAACTGCAAGAAGGCAAGAAACTGCAAGAGCTGCAGCCATACGATGGCTGCAATCCTTCAGTGTACAGAGGCCCAATTCTGCTGCCCCGGCAGGCCAACTCGGCGCCGCCGGCCGTGCCGCCGGAGATGTCGTCCTCGTCGGGGTCAGGGAGAAGCGCGACGGAGGCGAGAGCGTTGAAGATCCACAGCGAGGCTGAACGGCGGCGGCGAGAGAGGATCAATGCTCATCTGACAACACTGAGGAGAATGATCCCTGATACTAAGCAGGTTTGTGCAAGTTTTTACCGTTGTGAAGCATTCAGAAAGAAAAAAAATATGCATCAACATCTGAGCCATTTCAGAGAGTTTGCTCGCAGTTCAACTTTAAACTTTTTTTGTGATCTTGTTAGCTAACATAATTGTTGAAGCTAAAGATGAGAGAGGTTAGATATCTATTTAAAAAACTGTTTTTCTGTCGTAGTTCGTGTAGAACTTTGATACTTGCAAGAAAGTCGAAACCAAGAAAAAGTCATCTGAAAGAAATCTTCAGGCTCACATTTGTTCACATTTCAACACTCCTTTTCTAATAAGTTTGGAATTCCCTCACAGGACAAATGCTACAAGCCTAGAATGCCATGACTCCTGAACACAAATTTTCTTAAAAAAATTTCTGCACTGCAGATGGACAAGGCCACCTTGTTAGCCAGAGTGGTGGACCAAGTGAAGGATCTGAAGAGGAAAGCAAGTGAGATCACACAAAGAACACCTCTCCCTCCAGAGACCAACGAAGTCTCCATCGAATGCTTCACCGGAGACGCTGCCACCGCCGCCACCACTGTCGCCGGCAACCACAAGACCTTGTACATCAAGGCTTCCATCAGCTGCGACGACCGGCCGGACCTCATCGCCGGGATCACCCACGCATTCCATGGCCTGAGGCTGAGGACGGTCAGAGCAGAGATGACATCACTGGGAGGAAGGGTGCAGCATGTGTTCATATTGTGCAGGGAGGAAGGCATTGCAGGTGGTGTGAGCCTCAAGTCTCTGAAGGAGGCTGTCAGGCAGGCACTAGCCAAGGTTGCCTCTCCTGAATTGGTATATGGCAGCAGTCACTTTCAGAGCAAGAGGCAGAGGATCCTGGAGTCACATTGCTCAATTATGTCCATATAGATTTGTTCCTCTTCTGGGGATTTTGATTTTATTTTTCTACTAGCTGAGAATATGTATGAAATAAGAGAGAGAATCTTCTTCTTCTGAGAGCTATATAGGCCTGAGAATTGTGTGCCTGAAATTGCTGTGAAAGAATTGATGTCTGAACTGTTGCTAGTGCTAGTGGTTGCAATCAACTGACAAGATCATATGGCACAGGGTTTGCATTGTGTATGACTGTGTGTACAGAAATATTCTTCTGGGAAGTCACATGATAAGCTTGACAAT
CDS Sequence
  • >LOC_Os01g06640.3
    ATGGACAAGGCCACCTTGTTAGCCAGAGTGGTGGACCAAGTGAAGGATCTGAAGAGGAAAGCAAGTGAGATCACACAAAGAACACCTCTCCCTCCAGAGACCAACGAAGTCTCCATCGAATGCTTCACCGGAGACGCTGCCACCGCCGCCACCACTGTCGCCGGCAACCACAAGACCTTGTACATCAAGGCTTCCATCAGCTGCGACGACCGGCCGGACCTCATCGCCGGGATCACCCACGCATTCCATGGCCTGAGGCTGAGGACGGTCAGAGCAGAGATGACATCACTGGGAGGAAGGGTGCAGCATGTGTTCATATTGTGCAGGGAGGAAGGCATTGCAGGTGGTGTGAGCCTCAAGTCTCTGAAGGAGGCTGTCAGGCAGGCACTAGCCAAGGTTGCCTCTCCTGAATTGGTATATGGCAGCAGTCACTTTCAGAGCAAGAGGCAGAGGATCCTGGAGTCACATTGCTCAATTATGTCCATATAG
  • >LOC_Os01g06640.1
    ATGGACAAGGCCACCTTGTTAGCCAGAGTGGTGGACCAAGTGAAGGATCTGAAGAGGAAAGCAAGTGAGATCACACAAAGAACACCTCTCCCTCCAGAGACCAACGAAGTCTCCATCGAATGCTTCACCGGAGACGCTGCCACCGCCGCCACCACTGTCGCCGGCAACCACAAGACCTTGTACATCAAGGCTTCCATCAGCTGCGACGACCGGCCGGACCTCATCGCCGGGATCACCCACGCATTCCATGGCCTGAGGCTGAGGACGGTCAGAGCAGAGATGACATCACTGGGAGGAAGGGTGCAGCATGTGTTCATATTGTGCAGGGAGGAAGGCATTGCAGGTGGTGTGAGCCTCAAGTCTCTGAAGGAGGCTGTCAGGCAGGCACTAGCCAAGGTTGCCTCTCCTGAATTGGTATATGGCAGCAGTCACTTTCAGAGCAAGAGGCAGAGGATCCTGGAGTCACATTGCTCAATTATGTCCATATAG
  • >LOC_Os01g06640.2
    ATGGACAAGGCCACCTTGTTAGCCAGAGTGGTGGACCAAGTGAAGGATCTGAAGAGGAAAGCAAGTGAGATCACACAAAGAACACCTCTCCCTCCAGAGACCAACGAAGTCTCCATCGAATGCTTCACCGGAGACGCTGCCACCGCCGCCACCACTGTCGCCGGCAACCACAAGACCTTGTACATCAAGGCTTCCATCAGCTGCGACGACCGGCCGGACCTCATCGCCGGGATCACCCACGCATTCCATGGCCTGAGGCTGAGGACGGTCAGAGCAGAGATGACATCACTGGGAGGAAGGGTGCAGCATGTGTTCATATTGTGCAGGGAGGAAGGCATTGCAGGTGGTGTGAGCCTCAAGTCTCTGAAGGAGGCTGTCAGGCAGGCACTAGCCAAGGTTGCCTCTCCTGAATTGGTATATGGCAGCAGTCACTTTCAGAGCAAGAGGCAGAGGATCCTGGAGTCACATTGCTCAATTATGTCCATATAG
Protein Sequence
  • >LOC_Os01g06640.3
    MDKATLLARVVDQVKDLKRKASEITQRTPLPPETNEVSIECFTGDAATAATTVAGNHKTLYIKASISCDDRPDLIAGITHAFHGLRLRTVRAEMTSLGGRVQHVFILCREEGIAGGVSLKSLKEAVRQALAKVASPELVYGSSHFQSKRQRILESHCSIMSI*
  • >LOC_Os01g06640.1
    MDKATLLARVVDQVKDLKRKASEITQRTPLPPETNEVSIECFTGDAATAATTVAGNHKTLYIKASISCDDRPDLIAGITHAFHGLRLRTVRAEMTSLGGRVQHVFILCREEGIAGGVSLKSLKEAVRQALAKVASPELVYGSSHFQSKRQRILESHCSIMSI*
  • >LOC_Os01g06640.2
    MDKATLLARVVDQVKDLKRKASEITQRTPLPPETNEVSIECFTGDAATAATTVAGNHKTLYIKASISCDDRPDLIAGITHAFHGLRLRTVRAEMTSLGGRVQHVFILCREEGIAGGVSLKSLKEAVRQALAKVASPELVYGSSHFQSKRQRILESHCSIMSI*