Information report for TPI;OsTPI1.1
Gene Details
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Functional Descriptions
- A single TPI mRNA species of about 1100 nucleotides was detected by gel blot hybridization analysis of RNA isolated from root, culm, and leaf tissues, indicating that its expression is ubiquitous.
- Based on sequence comparison and molecular analysis, we propose that the chloroplast-located TPI may be encoded by divergent structural nuclear genes in rice.
Functional Keywords
- culm , root , chloroplast , leaf
Literature and News
- Expressed sequence tags from cultured cells of rice (Oryza sativa L.) under stressed conditions: analysis of transcripts of genes engaged in ATP-generating pathways . DOI: 10.1007/BF00043875 ; PMID: 8049371
- Cytosolic triosephosphate isomerase is a single gene in rice . DOI: 10.1104/pp.101.2.683 ; PMID: 8278510
- A Cytosolic Triosephosphate Isomerase Is a Key Component in XA3/XA26-Mediated Resistance . DOI: 10.1104/pp.18.00348 ; PMID: 30158116
Gene Resources
- NCBI ID: M87064
Sequences
cDNA Sequence
- >LOC_Os01g05490.2
ATATTATCCTGTCCATGGTGTTTTTCTTCCTCCTCCACAAAAACCAAAATCCAATCTCCAGCTCTCTTCCCCCCCCCCCCCCCCCCCCCCGCGTCCAGTTCCATCTAATCAGCTTCTCGTCGAGATGGGCCGCAAGTTCTTCGTTGGTGGCAACTGGAAATGCAACGGGACCACTGATCAGGTGGACAAAATTGTGAAAATTCTGAATGAGGGACAGATTGCTTCTACAGATGTTGTTGAGGTGGTTGTCAGCCCACCTTATGTGTTCCTTCCCGTGGTCAAGAGTCAGCTGCGCCCGGAGATCCAAGTTGCTGCTCAGAATTGTTGGGTGAAGAAGGGCGGGGCTTTCACCGGTGAGGTCAGCGCTGAGATGCTTGTCAACCTTAGTATTCCCTGGGTTATTCTTGGACACTCTGAAAGGAGGAGTTTGTTGGGTGAATCAAATGAGTTTGTTGGAGACAAAGTGGCATATGCGCTCTCTCAGGGCTTGAAGGTCATTGCATGTGTTGGTGAGACTCTCGAGCAGCGGGAATCTGGTTCGACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTTCTGAAAGGATCAAGGATTGGACTAATGTGGTTGTTGCCTATGAACCTGTGTGGGCCATTGGAACTGGTAAAGTTGCTACACCAGATCAAGCACAAGAAGTAAGTTTCTTATATTGATAAGCACACAAAGTGTTCATTCATGAACTTCTGCACGTTCCATAATTGTTACCTATGCTCTAGATAAAATATCTTGTTTAAACAACCATCTGGTTTGTATTATTGTATCAGGTGCATGATGGCCTGAGGAAGTGGCTCGCTGCTAATGTCAGTGCAGAGGTTGCTGAATCAACAAGGATCATCTATGGAGGTTCCGTAACTGGTGCGAACTGCAAGGAGCTGGCAGCAAAGCCTGATGTTGATGGTTTTCTCGTCGGTGGTGCTTCATTGAAGCCTGAATTCATCGACATCATCAACTCCGCCACCGTGAAGTCCGCCTAAGATCTTCACCCCATTCACCTTCGGCGTGGGAAGATGTCTGAAGAGGATCATACCTTTTTCTGTGCTTATGTAATGCTAGTAGTTTTGTGCTGGAGCAGCTACTCTTTTTCCTCCCCTTCACTTCCCTGAAGCTACCTGCAGCTTGAGCAATGCTAATAATGCACACCACTGAACATACTACCATACCAATAATGTTTAGCTCCTTTTGTCGTGAGTTATTATCATGTGAGTTTCAGATCAGATTTCACTGGTCCCTTCACCTATTCTTGCTGGCATATCAGTCTGATGAATCAGGCATCAATTCTGGTTTCTCTGTGTTATGGTCTGCAATGTCTAGTGAGGTTTAAGGTTTTTGCATCTTTTGGTCCCCATGATTGATTCCAAGTAACAGGCTAACTGCCATAGTACCTCAAATTTTGGAATATCTTGTGTTGTGTGCTGATCTGCTCAGTTGGCACAATCCTCTGAACGCAACCGTTGAGCAAACTTTGCACGGTTGCTGCCAATCAATTTGAGAATGGACCAATCTTTCGTCAG - >LOC_Os01g05490.1
ATATTATCCTGTCCATGGTGTTTTTCTTCCTCCTCCACAAAAACCAAAATCCAATCTCCAGCTCTCTTCCCCCCCCCCCCCCCCCCCCCCGCGTCCAGTTCCATCTAATCAGCTTCTCGTCGAGATGGGCCGCAAGTTCTTCGTTGGTGGCAACTGGAAATGCAACGGGACCACTGATCAGGTGGACAAAATTGTGAAAATTCTGAATGAGGGACAGATTGCTTCTACAGATGTTGTTGAGGTGGTTGTCAGCCCACCTTATGTGTTCCTTCCCGTGGTCAAGAGTCAGCTGCGCCCGGAGATCCAAGTTGCTGCTCAGAATTGTTGGGTGAAGAAGGGCGGGGCTTTCACCGGTGAGGTCAGCGCTGAGATGCTTGTCAACCTTAGTATTCCCTGGGTTATTCTTGGACACTCTGAAAGGAGGAGTTTGTTGGGTGAATCAAATGAGTTTGTTGGAGACAAAGTGGCATATGCGCTCTCTCAGGGCTTGAAGGTCATTGCATGTGTTGGTGAGACTCTCGAGCAGCGGGAATCTGGTTCGACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTTCTGAAAGGATCAAGGATTGGACTAATGTGGTTGTTGCCTATGAACCTGTGTGGGCCATTGGAACTGGTAAAGTTGCTACACCAGATCAAGCACAAGAAGTAAGTTTCTTATATTGATAAGCACACAAAGTGTTCATTCATGAACTTCTGCACGTTCCATAATTGTTACCTATGCTCTAGATAAAATATCTTGTTTAAACAACCATCTGGTTTGTATTATTGTATCAGGTGCATGATGGCCTGAGGAAGTGGCTCGCTGCTAATGTCAGTGCAGAGGTTGCTGAATCAACAAGGATCATCTATGGAGGTTCCGTAACTGGTGCGAACTGCAAGGAGCTGGCAGCAAAGCCTGATGTTGATGGTTTTCTCGTCGGTGGTGCTTCATTGAAGCCTGAATTCATCGACATCATCAACTCCGCCACCGTGAAGTCCGCCTAAGATCTTCACCCCATTCACCTTCGGCGTGGGAAGATGTCTGAAGAGGATCATACCTTTTTCTGTGCTTATGTAATGCTAGTAGTTTTGTGCTGGAGCAGCTACTCTTTTTCCTCCCCTTCACTTCCCTGAAGCTACCTGCAGCTTGAGCAATGCTAATAATGCACACCACTGAACATACTACCATACCAATAATGTTTAGCTCCTTTTGTCGTGAGTTATTATCATGTGAGTTTCAGATCAGATTTCACTGGTCCCTTCACCTATTCTTGCTGGCATATCAGTCTGATGAATCAGGCATCAATTCTGGTTTCTCTGTGTTATGGTCTGCAATGTCTAGTGAGGTTTAAGGTTTTTGCATCTTTTGGTCCCCATGATTGATTCCAAGTAACAGGCTAACTGCCATAGTACCTCAAATTTTGGAATATCTTGTGTTGTGTGCTGATCTGCTCAGTTGGCACAATCCTCTGAACGCAACCGTTGAGCAAACTTTGCACGGTTGCTGCCAATCAATTTGAGAATGGACCAATCTTTCGTCAG
CDS Sequence
- >LOC_Os01g05490.2
ATGGGCCGCAAGTTCTTCGTTGGTGGCAACTGGAAATGCAACGGGACCACTGATCAGGTGGACAAAATTGTGAAAATTCTGAATGAGGGACAGATTGCTTCTACAGATGTTGTTGAGGTGGTTGTCAGCCCACCTTATGTGTTCCTTCCCGTGGTCAAGAGTCAGCTGCGCCCGGAGATCCAAGTTGCTGCTCAGAATTGTTGGGTGAAGAAGGGCGGGGCTTTCACCGGTGAGGTCAGCGCTGAGATGCTTGTCAACCTTAGTATTCCCTGGGTTATTCTTGGACACTCTGAAAGGAGGAGTTTGTTGGGTGAATCAAATGAGTTTGTTGGAGACAAAGTGGCATATGCGCTCTCTCAGGGCTTGAAGGTCATTGCATGTGTTGGTGAGACTCTCGAGCAGCGGGAATCTGGTTCGACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTTCTGAAAGGATCAAGGATTGGACTAATGTGGTTGTTGCCTATGAACCTGTGTGGGCCATTGGAACTGGTAAAGTTGCTACACCAGATCAAGCACAAGAAGTAAGTTTCTTATATTGA - >LOC_Os01g05490.1
ATGGGCCGCAAGTTCTTCGTTGGTGGCAACTGGAAATGCAACGGGACCACTGATCAGGTGGACAAAATTGTGAAAATTCTGAATGAGGGACAGATTGCTTCTACAGATGTTGTTGAGGTGGTTGTCAGCCCACCTTATGTGTTCCTTCCCGTGGTCAAGAGTCAGCTGCGCCCGGAGATCCAAGTTGCTGCTCAGAATTGTTGGGTGAAGAAGGGCGGGGCTTTCACCGGTGAGGTCAGCGCTGAGATGCTTGTCAACCTTAGTATTCCCTGGGTTATTCTTGGACACTCTGAAAGGAGGAGTTTGTTGGGTGAATCAAATGAGTTTGTTGGAGACAAAGTGGCATATGCGCTCTCTCAGGGCTTGAAGGTCATTGCATGTGTTGGTGAGACTCTCGAGCAGCGGGAATCTGGTTCGACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTTCTGAAAGGATCAAGGATTGGACTAATGTGGTTGTTGCCTATGAACCTGTGTGGGCCATTGGAACTGGTAAAGTTGCTACACCAGATCAAGCACAAGAAGTAAGTTTCTTATATTGA
Protein Sequence
- >LOC_Os01g05490.2
MGRKFFVGGNWKCNGTTDQVDKIVKILNEGQIASTDVVEVVVSPPYVFLPVVKSQLRPEIQVAAQNCWVKKGGAFTGEVSAEMLVNLSIPWVILGHSERRSLLGESNEFVGDKVAYALSQGLKVIACVGETLEQRESGSTMDVVAAQTKAISERIKDWTNVVVAYEPVWAIGTGKVATPDQAQEVSFLY* - >LOC_Os01g05490.1
MGRKFFVGGNWKCNGTTDQVDKIVKILNEGQIASTDVVEVVVSPPYVFLPVVKSQLRPEIQVAAQNCWVKKGGAFTGEVSAEMLVNLSIPWVILGHSERRSLLGESNEFVGDKVAYALSQGLKVIACVGETLEQRESGSTMDVVAAQTKAISERIKDWTNVVVAYEPVWAIGTGKVATPDQAQEVSFLY*