Information report for OsRAV2
Gene Details
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Functional Descriptions
- Identification of a regulatory element responsible for salt induction of rice OsRAV2 through ex situ and in situ promoter analysis.
- Transgenic analysis indicated that P OsRAV2 is induced by salt stress but not osmotic stress or ABA treatment.
- Serial 5’ deletions and site-specific mutations in P OsRAV2 revealed that a GT-1 element located at position -664 relative to the putative translation start site is essential for the salt induction of P OsRAV2.
- The regulatory function of the GT-1 element in the salt induction of OsRAV2 was verified in situ in plants with targeted mutations generated using the CRISPR/Cas9 (clustered regularly interspaced short palindromic repeats/CRISPR-associated protein 9) system.
- Taken together, our results indicate that the GT-1 element directly controls the salt response of OsRAV2.
- Further expression profile analyses indicated that OsRAV2 is transcriptionally regulated by salt, but not KCl, osmotic stress, cold or ABA (abscisic acid) treatment.
- To elucidate the regulatory mechanism of the stress response at the transcriptional level, we isolated and characterized the promoter region of OsRAV2 (P OsRAV2 ).
Functional Keywords
- salt , ABA , salt-stress , stress , abscisic-acid , stress-response
Literature and News
Gene Resources
- UniProt: Q9AWS0
- EMBL: AK065008, AP002913, AP008207
- AlphaFoldDB: Q9AWS0
- EnsemblPlants: Os01t0141000-01
- Gramene: Os01t0141000-01
- KEGG: dosa:Os01g0141000
- Orthologous matrix: KKQCVAH
- InterPro: IPR001471, IPR003340, IPR015300
- PANTHER: PTHR31140, PTHR31140:SF56
- SUPFAM: SSF101936, SSF54171
- PROSITE: PS50863, PS51032
- Gene3D: 2.40.330.10, 3.30.730.10
- OrthoDB: Q9AWS0
- SWISS-MODEL: Q9AWS0
- Conserved Domain Database: cd00018, cd10017
- eggNOG: ENOG502QRVI
Sequences
cDNA Sequence
- >LOC_Os01g04800.1
TATCACTCTTCATCATCATCTTCTTTGGCTTCTCCCTCTTCACTGCCCTAATTACAACCCATTTGCTTATCTCTCTCCTCTCTCTCTCTCTCTCGCTGCAGCCATAGCTTAGCTAGAGCTAGAGCTTTCTTGGTGCCGAGATGGGGGTGGTCAGCTTCTCCTCGACTTCCTCCGGCGCGTCCACGGCCACCACCGAGTCCGGCGGCGCCGTGCGGATGTCGCCGGAGCCGGTGGTGGCGGTGGCGGCGGCGGCTCAACAGCTACCGGTGGTGAAGGGAGTTGACTCGGCGGATGAGGTGGTGACGTCGAGGCCGGCGGCGGCGGCGGCGCAGCAGTCGTCGCGGTACAAGGGGGTGGTGCCGCAGCCGAACGGGAGGTGGGGGGCGCAGATCTACGAGCGGCACGCGCGGGTGTGGCTCGGGACGTTCCCCGACGAGGAGGCGGCGGCGCGGGCCTACGACGTGGCGGCGCTCCGGTACCGGGGGCGCGACGCGGCCACCAACTTCCCCGGGGCCGCGGCGTCGGCCGCCGAGCTCGCGTTCCTCGCCGCGCACTCCAAGGCCGAGATCGTCGACATGCTCCGGAAGCACACCTACGCCGACGAGCTCCGCCAGGGGCTCCGCCGCGGCCGCGGCATGGGCGCCCGCGCCCAGCCCACGCCGTCGTGGGCGCGCGAGCCGCTGTTCGAGAAGGCCGTGACGCCCAGCGACGTCGGCAAGCTCAACCGCCTCGTGGTGCCCAAGCAGCACGCCGAGAAGCACTTCCCGCTCCGCCGCGCGGCGAGCTCCGACTCCGCCTCCGCCGCCGCCACCGGCAAGGGCGTGCTCCTCAACTTCGAGGACGGCGAGGGGAAGGTGTGGCGATTCCGGTACTCGTACTGGAACAGCAGCCAGAGCTACGTGCTGACCAAGGGGTGGAGCCGATTCGTGAGGGAGAAGGGCCTCCGCGCCGGCGACACCATAGTCTTCTCCCGCTCGGCGTACGGCCCCGACAAGCTGCTCTTCATCGACTGCAAGAAGAACAACGCGGCGGCGGCGACCACCACCTGCGCCGGCGACGAGAGGCCAACCACAAGCGGCGCCGAACCACGCGTCGTGAGGCTCTTCGGCGTCGACATCGCCGGCGGCGATTGCCGGAAGCGGGAGAGGGCGGTGGAGATGGGGCAAGAGGTCTTCCTACTGAAGAGGCAATGCGTGGTTCATCAGCGTACTCCTGCCCTAGGTGCCCTGCTGTTATAGCATCAAATCAAATTCATATATAGATCAAATCAAATCTTCTTCTCTTCCATCTTTTTTGTTGTTCATCGTCTGTTGTTTCATCTTCGATTTAGAGCTGTTCTATCTTCGACTTTCTTTTTTTGTTTTTTGTCTTTATTTTGCATAGAAGTTTGTCAGGTCAGAGATTGCAAATGATCGATCAAGATCGAGCTGTATATGTACAGCCTTATTAGGAAATTAAGTCTAGAGATCATTCAAGTATGTACAATTATCTAATAGTACATAGTAATAAGTTCTGTTTCTTTCCAAAGTTGTCTTCTTCTGTTCATCTGATGTGAATTGAATTAATTAGATTCCACAGAATTTTATTCTTCGCAAGA
CDS Sequence
- >LOC_Os01g04800.1
ATGGGGGTGGTCAGCTTCTCCTCGACTTCCTCCGGCGCGTCCACGGCCACCACCGAGTCCGGCGGCGCCGTGCGGATGTCGCCGGAGCCGGTGGTGGCGGTGGCGGCGGCGGCTCAACAGCTACCGGTGGTGAAGGGAGTTGACTCGGCGGATGAGGTGGTGACGTCGAGGCCGGCGGCGGCGGCGGCGCAGCAGTCGTCGCGGTACAAGGGGGTGGTGCCGCAGCCGAACGGGAGGTGGGGGGCGCAGATCTACGAGCGGCACGCGCGGGTGTGGCTCGGGACGTTCCCCGACGAGGAGGCGGCGGCGCGGGCCTACGACGTGGCGGCGCTCCGGTACCGGGGGCGCGACGCGGCCACCAACTTCCCCGGGGCCGCGGCGTCGGCCGCCGAGCTCGCGTTCCTCGCCGCGCACTCCAAGGCCGAGATCGTCGACATGCTCCGGAAGCACACCTACGCCGACGAGCTCCGCCAGGGGCTCCGCCGCGGCCGCGGCATGGGCGCCCGCGCCCAGCCCACGCCGTCGTGGGCGCGCGAGCCGCTGTTCGAGAAGGCCGTGACGCCCAGCGACGTCGGCAAGCTCAACCGCCTCGTGGTGCCCAAGCAGCACGCCGAGAAGCACTTCCCGCTCCGCCGCGCGGCGAGCTCCGACTCCGCCTCCGCCGCCGCCACCGGCAAGGGCGTGCTCCTCAACTTCGAGGACGGCGAGGGGAAGGTGTGGCGATTCCGGTACTCGTACTGGAACAGCAGCCAGAGCTACGTGCTGACCAAGGGGTGGAGCCGATTCGTGAGGGAGAAGGGCCTCCGCGCCGGCGACACCATAGTCTTCTCCCGCTCGGCGTACGGCCCCGACAAGCTGCTCTTCATCGACTGCAAGAAGAACAACGCGGCGGCGGCGACCACCACCTGCGCCGGCGACGAGAGGCCAACCACAAGCGGCGCCGAACCACGCGTCGTGAGGCTCTTCGGCGTCGACATCGCCGGCGGCGATTGCCGGAAGCGGGAGAGGGCGGTGGAGATGGGGCAAGAGGTCTTCCTACTGAAGAGGCAATGCGTGGTTCATCAGCGTACTCCTGCCCTAGGTGCCCTGCTGTTATAG
Protein Sequence
- >LOC_Os01g04800.1
MGVVSFSSTSSGASTATTESGGAVRMSPEPVVAVAAAAQQLPVVKGVDSADEVVTSRPAAAAAQQSSRYKGVVPQPNGRWGAQIYERHARVWLGTFPDEEAAARAYDVAALRYRGRDAATNFPGAAASAAELAFLAAHSKAEIVDMLRKHTYADELRQGLRRGRGMGARAQPTPSWAREPLFEKAVTPSDVGKLNRLVVPKQHAEKHFPLRRAASSDSASAAATGKGVLLNFEDGEGKVWRFRYSYWNSSQSYVLTKGWSRFVREKGLRAGDTIVFSRSAYGPDKLLFIDCKKNNAAAATTTCAGDERPTTSGAEPRVVRLFGVDIAGGDCRKRERAVEMGQEVFLLKRQCVVHQRTPALGALLL*