Information report for Lir1;OsLIR1
Gene Details
|
|
Functional Descriptions
Literature and News
- Circadian rhythmicity in the expression of a novel light-regulated rice gene . DOI: 10.1007/BF00039006 ; PMID: 8499615
- LIGHT-INDUCED RICE1 Regulates Light-Dependent Attachment of LEAF-TYPE FERREDOXIN-NADP+ OXIDOREDUCTASE to the Thylakoid Membrane in Rice and Arabidopsis . DOI: 10.1105/tpc.15.01027 ; PMID: 26941088
Gene Resources
- UniProt: Q03200
- EMBL: AK067670, AK120535, AP002818
- AlphaFoldDB: Q03200
- EnsemblPlants: Os01t0102900-01
- Gramene: Os01t0102900-01
- KEGG: dosa:Os01g0102900
- Orthologous matrix: EFCERPY
- InterPro: IPR009856
- PANTHER: PTHR36762, PTHR36762:SF2
- OrthoDB: Q03200
- eggNOG: ENOG502S43X
Homologs
- Arabidopsis thaliana: AT3G26740
- Brassica napus: GSBRNA2T00038023001
Sequences
cDNA Sequence
- >LOC_Os01g01340.2
ATCCCGGCCTTGTGGCACACTTGACTGGAGATGTATAAAGAGAGGAGGATGTGAAGAAAGAAGATATCTACCACCAAGCTAATTAAGCAAAAGAAGAAGAAGAAGAAAGAAGAAGAAGAAGATGCAGACCGCTGCTAGCAGTGTCGTTGGATTGTCGGCCGTGTTGCCCGCTGCTGTGAAGGGGCGCAGCCTGCAGATTCAGGCTCCTCGCCGTGTTGCGTTGCGCGTTCGTGCGGCGGCGGCGGCGGTGGCAGTGGAGGCTGCGGAGGTGGACTACAGCTCTAACATCTCGGTGTTTCCGATGGAGGCGTGCGACCTCATCGGCGGCGAGGCGTGCAACGTGCAGATGTACCCAGAGGCCAAGCTCTCATCATCGGCTGCTGTTGCTGTTTCTCGTGCGGCGGCGGAGGAAGTCGACAGGGACTACCTATCCTACGACGAGCCCACCACGTAATTAATTAAGCTCTACTACTATACTACCCAACTGATGAAATCTAGTGTAACTAACTGGAACTGAAATCGGAAAACACAAAATTGCACGCAGGGTGTTCCCCGAGGAGGCGTGCGACGATCTGGGCGGAGAGTTCTGCAAGGCCACCTGATCCCATTCCCATCCATGGAGAATTGGAGTCTTCTATCATCCTTCCTCCTCTGCTCCACTACCTTAATTCCATGTAGCTACAGATTTATATGTTAATCATCATGTAATGGTACATATCTCCTTGTTAATAAGGCACGCTAGTCTAGCTCCTCAAAATGATTTACAATAATATAATATTTACATACATATAATACACTTACTCCATCGAACAATACCTCTGTTATCTCATGGTTACTTCCCATGATCCCATCATCAACACCAACATTCATCACACTTTGCTGCGTTAGAGCAGGTACAATGGCAGGCTATAAGCCAGCTACAAACATATTTTACGAAGATAAATCAAGAGAGAGAAGAGCAACGGGCTACAGATTTGTAGCCAGCTGTAGCACGGACTCCAAGACGCAGTGTGTCTATGACAGGTGGGACTAGATATTAATAGTGTAGTATGTAACTATTGTATGAATGGGCTATTAGATTGACTATAGATGAATTGGAGCTAGTAGTTGGCTATACTATTGAACTTGCTCTTATATAGCAACAGGTACAGTATATGAATTAATTATCTCACAACTATTGGAAAGTTGGCGCCAGAAAACTGAGGGAGCACTGAAACAAATTTGTTGTGCGGAAACATTTATATTAAAAAAAACATATATTATGGACATATGTGATTACCTATAGATCAGCTCTAATCTGCGCCGGCCTCTCCGTCGTACTTGGGACCTGCCAATCCAGATACCTGTCAATGTTATCAAAACTACCTCCAGGGCAGACAACAGTGTCCAGAGAAGGCTATTCACCTAGACCAGGAGCAAATACATCATCCGGATACTTCCTCCGGTTATTCACCTAAAGCATTTCCCCTCGCTTGTTGTCATGGAGGCAATATGACAATATGAGTCATGGACGCTTTGCCAAACTTACCTGGAATCAATCAGCAACGGGCCGGAGCACAATATATGTCGATACCTGCTGCATAGTGCATACACTAGTGAGTACTATATGACAAAGAAATTGAAGTGTGACGCCAACACTATAACTCGTGACATTATATAGGCTGGAGATAAATATTTATGCATGTCTTTCCGAACGCAATAACTATATTCACGAATTTTTGTGTGTAACAA - >LOC_Os01g01340.1
ATCCCGGCCTTGTGGCACACTTGACTGGAGATGTATAAAGAGAGGAGGATGTGAAGAAAGAAGATATCTACCACCAAGCTAATTAAGCAAAAGAAGAAGAAGAAGAAAGAAGAAGAAGAAGATGCAGACCGCTGCTAGCAGTGTCGTTGGATTGTCGGCCGTGTTGCCCGCTGCTGTGAAGGGGCGCAGCCTGCAGATTCAGGCTCCTCGCCGTGTTGCGTTGCGCGTTCGTGCGGCGGCGGCGGCGGTGGCAGTGGAGGCTGCGGAGGTGGACTACAGCTCTAACATCTCGGTGTTTCCGATGGAGGCGTGCGACCTCATCGGCGGCGAGGCGTGCAACGTGCAGATGTACCCAGAGGCCAAGCTCTCATCATCGGCTGCTGTTGCTGTTTCTCGTGCGGCGGCGGAGGAAGTCGACAGGGACTACCTATCCTACGACGAGCCCACCACGTAATTAATTAAGCTCTACTACTATACTACCCAACTGATGAAATCTAGTGTAACTAACTGGAACTGAAATCGGAAAACACAAAATTGCACGCAGGGTGTTCCCCGAGGAGGCGTGCGACGATCTGGGCGGAGAGTTCTGCAAGGCCACCTGATCCCATTCCCATCCATGGAGAATTGGAGTCTTCTATCATCCTTCCTCCTCTGCTCCACTACCTTAATTCCATGTAGCTACAGATTTATATGTTAATCATCATGTAATGGTACATATCTCCTTGTTAATAAGGCACGCTAGTCTAGCTCCTCAAAATGATTTACAATAATATAATATTTACATACATATAATACACTTACTCCATCGAACAATACCTCTGTTATCTCATGGTTACTTCCCATGATCCCATCATCAACACCAACATTCATCACACTTTGCTGCGTTAGAGCAGGTACAATGGCAGGCTATAAGCCAGCTACAAACATATTTTACGAAGATAAATCAAGAGAGAGAAGAGCAACGGGCTACAGATTTGTAGCCAGCTGTAGCACGGACTCCAAGACGCAGTGTGTCTATGACAGGTGGGACTAGATATTAATAGTGTAGTATGTAACTATTGTATGAATGGGCTATTAGATTGACTATAGATGAATTGGAGCTAGTAGTTGGCTATACTATTGAACTTGCTCTTATATAGCAACAGGTACAGTATATGAATTAATTATCTCACAACTATTGGAAAGTTGGCGCCAGAAAACTGAGGGAGCACTGAAACAAATTTGTTGTGCGGAAACATTTATATTAAAAAAAACATATATTATGGACATATGTGATTACCTATAGATCAGCTCTAATCTGCGCCGGCCTCTCCGTCGTACTTGGGACCTGCCAATCCAGATACCTGTCAATGTTATCAAAACTACCTCCAGGGCAGACAACAGTGTCCAGAGAAGGCTATTCACCTAGACCAGGAGCAAATACATCATCCGGATACTTCCTCCGGTTATTCACCTAAAGCATTTCCCCTCGCTTGTTGTCATGGAGGCAATATGACAATATGAGTCATGGACGCTTTGCCAAACTTACCTGGAATCAATCAGCAACGGGCCGGAGCACAATATATGTCGATACCTGCTGCATAGTGCATACACTAGTGAGTACTATATGACAAAGAAATTGAAGTGTGACGCCAACACTATAACTCGTGACATTATATAGGCTGGAGATAAATATTTATGCATGTCTTTCCGAACGCAATAACTATATTCACGAATTTTTGTGTGTAACAA
CDS Sequence
- >LOC_Os01g01340.2
ATGCAGACCGCTGCTAGCAGTGTCGTTGGATTGTCGGCCGTGTTGCCCGCTGCTGTGAAGGGGCGCAGCCTGCAGATTCAGGCTCCTCGCCGTGTTGCGTTGCGCGTTCGTGCGGCGGCGGCGGCGGTGGCAGTGGAGGCTGCGGAGGTGGACTACAGCTCTAACATCTCGGTGTTTCCGATGGAGGCGTGCGACCTCATCGGCGGCGAGGCGTGCAACGTGCAGATGTACCCAGAGGCCAAGCTCTCATCATCGGCTGCTGTTGCTGTTTCTCGTGCGGCGGCGGAGGAAGTCGACAGGGACTACCTATCCTACGACGAGCCCACCACGTAA - >LOC_Os01g01340.1
ATGCAGACCGCTGCTAGCAGTGTCGTTGGATTGTCGGCCGTGTTGCCCGCTGCTGTGAAGGGGCGCAGCCTGCAGATTCAGGCTCCTCGCCGTGTTGCGTTGCGCGTTCGTGCGGCGGCGGCGGCGGTGGCAGTGGAGGCTGCGGAGGTGGACTACAGCTCTAACATCTCGGTGTTTCCGATGGAGGCGTGCGACCTCATCGGCGGCGAGGCGTGCAACGTGCAGATGTACCCAGAGGCCAAGCTCTCATCATCGGCTGCTGTTGCTGTTTCTCGTGCGGCGGCGGAGGAAGTCGACAGGGACTACCTATCCTACGACGAGCCCACCACGTAA
Protein Sequence
- >LOC_Os01g01340.2
MQTAASSVVGLSAVLPAAVKGRSLQIQAPRRVALRVRAAAAAVAVEAAEVDYSSNISVFPMEACDLIGGEACNVQMYPEAKLSSSAAVAVSRAAAEEVDRDYLSYDEPTT* - >LOC_Os01g01340.1
MQTAASSVVGLSAVLPAAVKGRSLQIQAPRRVALRVRAAAAAVAVEAAEVDYSSNISVFPMEACDLIGGEACNVQMYPEAKLSSSAAVAVSRAAAEEVDRDYLSYDEPTT*