Gene Details:
- Gene ID: HORVU.MOREX.r3.4HG0405810
- Gene Symbol: HvPDS
- Gene Name: Phytoene dehydrogenase
- Genome: MorexV3_pseudomolecules_assembly
- Species: Hordeum vulgare
Functional Descriptions:
- Our previous study reported that knockdown of the barley phytoene desaturase gene HvPDS by virus-induced gene silencing resulted in a photobleaching phenotype in seedlings
- Agrobacterium-mediated transformation was performed on microspore-derived callus to target the HvPDS gene, and T0 albinos with targeted mutations were successfully obtained from commercial varieties.
Function-related keywords:
- seedlings , microspore , callus , virus
Literature:
- Highly efficient and genotype-independent barley gene editing based on anther culture. DOI: 10.1016/j.xplc.2020.100082 ; PMID: 33898972
Related News:
Gene Resources:
- NCBI ID:
- UniProt accessions: M0UGD2
Orthologs:
Sequences:
cDNA Sequence
- >HORVU.MOREX.r3.4HG0405810.1
ATGGACACCGGCTGTCTATCATCTATGAACATAGCTGGAGCTAAGCAAGCGGGCTCTTTTGCCGGACAACTTCATACGCAGAGGTGCTTCACAAGTAGCAGTGTCCAAGCACTGAAAACTAGCCATCGTACGACCTCCCTTGGCTTAAGGAATAAAGGAAAAGGATCACGCCGTGGGCTTCGTGCTCTGCAGGTTGTTTGCCAAGATTTTCCAAGGCCTCCACTTGAAAACACAGTTAACTATTTGGAAGCTGGCCAGCTTTCTTCATCGTTTAGAGGCAGTGAACGCCCCAGTAAACCATTACAGGTCGTGATTGCTGGTGCAGGACTGGCTGGTCTATCAACTGCAAAATACCTGGCAGATGCTGGCCATAAACCCATAGTGCTTGAGGCAAGAGATGTCTTGGGCGGAAAGTTAGCTGCTTGGAAGGATGAAGATGGTGATTGGTATGAGACTGGCCTTCATATTTTTTTTGGAGCTTATCCCAATGTACAGAATTTGTTTGCTGAGCTTGGTATTAGTGATCGCTTGCAATGGAAGGAACACTCCATGATATTTGCCATGCCAAACAAACCAGGGGAATACAGCCGTTTTGATTTCCCGGAGACTTTACCGGCGCCCTTGAATGGAGTGTGGGCCATACTGAAAAACAATGAAATGCTTACTTGGCCGGAGAAGGTGAAGTTTGCTATTGGGCTTCTTCCAGCAATGCTTGGTGGCCAAGCTTACGTTGAAGCTCAAGACGGCTTAACTGTTTCAGAATGGATGGAAAAGCAGGGTGTTCCTGATCGAGTCAACGATGAGGTTTTTATTGCAATGTCCAAGGCACTCAATTTCATAAACCCTGACGAGTTATCCATGCAGTGCATTCTGATTGCTCTAAACCGCTTTCTCCAGGAGACGCATGGCTCGAAAATGGCATTCTTGGATGGTAATCCTCCTGAAAGGCTATGCATGCCTATTGTTAACCACATTCAGTCTTTGGGTGGTGAGGTCCGGCTGAATTCTCGTATTCAGAAAATTGAACTGAACCCTGACGGAACTGTGAAGCACTTTGCACTTACTGACGGGACTCAAATAACTGGAGATGCATATGTTTGTGCAGCACCAGTCGATATCTTCAAGCTTCTTGTACCACAAGAGTGGAGAGAGATCTCTTACTTCAAAAGGCTGGATAAGTTAGTGGGAGTTCCTGTCATCAATGTTCATATATGGTTTGACAGAAAACTGAAAAACACATACGACCACCTTCTTTTCAGCAGGAGTTCACTTTTAAGCGTCTATGCAGACATGTCTTTAGCATGCAAGGAGTACTATGATCCAAACCGTTCGATGTTGGAGTTGGTCTTTGCTCCAGCAGAGGAATGGATTGGACGGAGTGACACGGAAATCATCGAAGCAACTATGCTAGAGCTAGCCAAGTTGTTTCCAGATGAAATTGCTGCTGACCAGAGTAAAGCGAAGATTCTTAAATACCATGTTGTGAAGACACCAAGGTCTGTTTACAAGACCGTCCCGAACTGCGAACCTTGCCGACCTATGCAACGGTCGCCGATCGAAGGGTTCTATCTGGCTGGCGATTACACGAAGCAGAAATACCTGGCTTCCATGGAAGGCGCGGTTCTATCCGGGAAGCTTTGCGCTCAGTCCATAGTGCAGGATTCTAAGATGCTGTCTCGCAGGAGCCAAGAAAGCCTGCAATCCGAAACCCCGGTCGCCTCCCAGTTGTAG
CDS Sequence
- >HORVU.MOREX.r3.4HG0405810.1
ATGGACACCGGCTGTCTATCATCTATGAACATAGCTGGAGCTAAGCAAGCGGGCTCTTTTGCCGGACAACTTCATACGCAGAGGTGCTTCACAAGTAGCAGTGTCCAAGCACTGAAAACTAGCCATCGTACGACCTCCCTTGGCTTAAGGAATAAAGGAAAAGGATCACGCCGTGGGCTTCGTGCTCTGCAGGTTGTTTGCCAAGATTTTCCAAGGCCTCCACTTGAAAACACAGTTAACTATTTGGAAGCTGGCCAGCTTTCTTCATCGTTTAGAGGCAGTGAACGCCCCAGTAAACCATTACAGGTCGTGATTGCTGGTGCAGGACTGGCTGGTCTATCAACTGCAAAATACCTGGCAGATGCTGGCCATAAACCCATAGTGCTTGAGGCAAGAGATGTCTTGGGCGGAAAGTTAGCTGCTTGGAAGGATGAAGATGGTGATTGGTATGAGACTGGCCTTCATATTTTTTTTGGAGCTTATCCCAATGTACAGAATTTGTTTGCTGAGCTTGGTATTAGTGATCGCTTGCAATGGAAGGAACACTCCATGATATTTGCCATGCCAAACAAACCAGGGGAATACAGCCGTTTTGATTTCCCGGAGACTTTACCGGCGCCCTTGAATGGAGTGTGGGCCATACTGAAAAACAATGAAATGCTTACTTGGCCGGAGAAGGTGAAGTTTGCTATTGGGCTTCTTCCAGCAATGCTTGGTGGCCAAGCTTACGTTGAAGCTCAAGACGGCTTAACTGTTTCAGAATGGATGGAAAAGCAGGGTGTTCCTGATCGAGTCAACGATGAGGTTTTTATTGCAATGTCCAAGGCACTCAATTTCATAAACCCTGACGAGTTATCCATGCAGTGCATTCTGATTGCTCTAAACCGCTTTCTCCAGGAGACGCATGGCTCGAAAATGGCATTCTTGGATGGTAATCCTCCTGAAAGGCTATGCATGCCTATTGTTAACCACATTCAGTCTTTGGGTGGTGAGGTCCGGCTGAATTCTCGTATTCAGAAAATTGAACTGAACCCTGACGGAACTGTGAAGCACTTTGCACTTACTGACGGGACTCAAATAACTGGAGATGCATATGTTTGTGCAGCACCAGTCGATATCTTCAAGCTTCTTGTACCACAAGAGTGGAGAGAGATCTCTTACTTCAAAAGGCTGGATAAGTTAGTGGGAGTTCCTGTCATCAATGTTCATATATGGTTTGACAGAAAACTGAAAAACACATACGACCACCTTCTTTTCAGCAGGAGTTCACTTTTAAGCGTCTATGCAGACATGTCTTTAGCATGCAAGGAGTACTATGATCCAAACCGTTCGATGTTGGAGTTGGTCTTTGCTCCAGCAGAGGAATGGATTGGACGGAGTGACACGGAAATCATCGAAGCAACTATGCTAGAGCTAGCCAAGTTGTTTCCAGATGAAATTGCTGCTGACCAGAGTAAAGCGAAGATTCTTAAATACCATGTTGTGAAGACACCAAGGTCTGTTTACAAGACCGTCCCGAACTGCGAACCTTGCCGACCTATGCAACGGTCGCCGATCGAAGGGTTCTATCTGGCTGGCGATTACACGAAGCAGAAATACCTGGCTTCCATGGAAGGCGCGGTTCTATCCGGGAAGCTTTGCGCTCAGTCCATAGTGCAGGATTCTAAGATGCTGTCTCGCAGGAGCCAAGAAAGCCTGCAATCCGAAACCCCGGTCGCCTCCCAGTTGTAG
Protein Sequence
- >HORVU.MOREX.r3.4HG0405810.1
MDTGCLSSMNIAGAKQAGSFAGQLHTQRCFTSSSVQALKTSHRTTSLGLRNKGKGSRRGLRALQVVCQDFPRPPLENTVNYLEAGQLSSSFRGSERPSKPLQVVIAGAGLAGLSTAKYLADAGHKPIVLEARDVLGGKLAAWKDEDGDWYETGLHIFFGAYPNVQNLFAELGISDRLQWKEHSMIFAMPNKPGEYSRFDFPETLPAPLNGVWAILKNNEMLTWPEKVKFAIGLLPAMLGGQAYVEAQDGLTVSEWMEKQGVPDRVNDEVFIAMSKALNFINPDELSMQCILIALNRFLQETHGSKMAFLDGNPPERLCMPIVNHIQSLGGEVRLNSRIQKIELNPDGTVKHFALTDGTQITGDAYVCAAPVDIFKLLVPQEWREISYFKRLDKLVGVPVINVHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLACKEYYDPNRSMLELVFAPAEEWIGRSDTEIIEATMLELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPMQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQSIVQDSKMLSRRSQESLQSETPVASQL