Gene Details:
- Gene ID: HORVU.MOREX.r3.3HG0307130
- Gene Symbol: HvGA20ox2sdw1
- Gene Name: gibberellin 20 oxidase 2-like protein
- Genome: MorexV3_pseudomolecules_assembly
- Species: Hordeum vulgare
Functional Descriptions:
- The HvGA20ox2|sdw1.a allele from Jotun resulted from a total deletion of the HvGA20ox2|sdw1 gene.
- The results provided further proof that the gibberellin 20-oxidase gene (HvGA20ox2|sdw1) is the functional gene of the barley HvGA20ox2|sdw1 mutants.
- Partial or total loss of function of the HvGA20ox2|sdw1 gene could be compensated by enhanced expression of its homolog HvGA20ox1 and HvGA20ox3.
- The 7-bp deletion in HvGA20ox2|sdw1 gene reduced plant height by approximately 13 cm and delayed flowering time by 3–5 days in the barley segregating DHLs population independently on environmental cue.
- The results provide further support for GA20 oxidase 2 (HvGA20ox2|sdw1) as the functional gene for the HvGA20ox2|sdw1 locus. We also observed that 52 barley varieties/lines displayed the short stature without the HvGA20ox2|sdw1.a, HvGA20ox2|sdw1.c and HvGA20ox2|sdw1.d alleles in this population.
Function-related keywords:
Literature:
- Characterization of the sdw1 semi-dwarf gene in barley. DOI: 10.1186/s12870-016-0964-4 ; PMID: 28086794
- Impact of the 7-bp deletion in HvGA20ox2 gene on agronomic important traits in barley (Hordeum vulgare L.). DOI: 10.1186/s12870-017-1121-4 ; PMID: 29143605
Related News:
Gene Resources:
- NCBI ID: PP053712.1
- UniProt accessions: A0A289DVX0
Orthologs:
Sequences:
cDNA Sequence
- >HORVU.MOREX.r3.3HG0307130.1
ATGGTGCTCCAGACCGCTCAGCAAGAACCATCCCTGACGCGCCCGCCTCGCTGCAGCGTCGCCAGCGCGGGCTCGCCGGCCGCCATGGACACCAGCCCTGCGACTCCCCTGCTCCTCCAGCCCCCCGCTCCCAGCATTGACCCCTCCGCCGCCAAGGCCGCCGTCAGCAAGGGCGGCGGCGCTGCCACCGCGGTGTACGACCTCCGGAGGGAGCCCAAGATCCCCGCCCCGTTCGTGTGGCCGCACGCCGAGGTGCGCCCCACCACGGCGCAGGAGCTGGCCGTGCCGGTGGTGGACGTGGGCGTGCTGCGCAATGGCGACGCCGCCGGGATACGCCGCGCCGTGGCGCAGGTGGCGTCGGCGTGCGCGACGCACGGGTTCTTCCAGGTGTCCGGGCACGGCGTGGACAACGCCCTGGCGCGCGCGGCGCTGGACGGCGCGAGCGGGTTCTTCCGTCTGCCGCTGGCCGAGAAGCAGCGCGCGCGGCGCATCCCGGGGACCGTGTCCGGGTACACGAGCGCGCACGCCGACCGGTTCGCCTCCAAGCTCCCCTGGAAGGAGACCCTCTCCTTCGGCTTCCACGACCGCGCCGGCGCCGCCGCGCCCGTGGTGGTGGACTACTTCACCAGCACCCTCGGGCCGGACTACGAGCCAATGGGGAGGGTGTACCAGGAGTACTGCGGCAAGATGAAGGAGCTGTCGCTGAGGATCATGGAGCTGCTGGAGCTGAGCCTGGGCGTGGAGAAGCGCGGGTACTACCGGGACTTCTTCGCGGACAGCAGCTCCATCATGCGGTGCAACTACTACCCGCCGTGCCCGGAGCCGGAGCGCACGCTGGGCACGGGCCCGCACTGCGACCCCACGGCGCTCACCATCCTCCTCCAGGACGACGTGGGCGGGCTGGAGGTCCTCGTCGACGGCGACTGGCGGCCCGTCCGCCCCGTCCCCGGCGCCATGGTCATCAACATCGGCGACACCTTCATGGCTCTGTCGAACGGGCGGTACAAGAGCTGCCTGCACCGGGCGGTGGTGAACCGGCGGCAGGAGCGGCGGTCGCTGGCCTTCTTCCTGTGCCCGCGCGAGGACCGGGTGGTGCGGCCGCCGCCGAGCCTGAGGAGCCCGCGGCAGTACCCGGACTTCACCTGGGCCGACCTCATGCGCTTCACGCAGCGCCACTACCGCGCCGACACGCGCACCCTCGACGCCTTCACCCAGTGGTTCTCCTCGGCCCAGGAGGCGGCCTGA
CDS Sequence
- >HORVU.MOREX.r3.3HG0307130.1
ATGGTGCTCCAGACCGCTCAGCAAGAACCATCCCTGACGCGCCCGCCTCGCTGCAGCGTCGCCAGCGCGGGCTCGCCGGCCGCCATGGACACCAGCCCTGCGACTCCCCTGCTCCTCCAGCCCCCCGCTCCCAGCATTGACCCCTCCGCCGCCAAGGCCGCCGTCAGCAAGGGCGGCGGCGCTGCCACCGCGGTGTACGACCTCCGGAGGGAGCCCAAGATCCCCGCCCCGTTCGTGTGGCCGCACGCCGAGGTGCGCCCCACCACGGCGCAGGAGCTGGCCGTGCCGGTGGTGGACGTGGGCGTGCTGCGCAATGGCGACGCCGCCGGGATACGCCGCGCCGTGGCGCAGGTGGCGTCGGCGTGCGCGACGCACGGGTTCTTCCAGGTGTCCGGGCACGGCGTGGACAACGCCCTGGCGCGCGCGGCGCTGGACGGCGCGAGCGGGTTCTTCCGTCTGCCGCTGGCCGAGAAGCAGCGCGCGCGGCGCATCCCGGGGACCGTGTCCGGGTACACGAGCGCGCACGCCGACCGGTTCGCCTCCAAGCTCCCCTGGAAGGAGACCCTCTCCTTCGGCTTCCACGACCGCGCCGGCGCCGCCGCGCCCGTGGTGGTGGACTACTTCACCAGCACCCTCGGGCCGGACTACGAGCCAATGGGGAGGGTGTACCAGGAGTACTGCGGCAAGATGAAGGAGCTGTCGCTGAGGATCATGGAGCTGCTGGAGCTGAGCCTGGGCGTGGAGAAGCGCGGGTACTACCGGGACTTCTTCGCGGACAGCAGCTCCATCATGCGGTGCAACTACTACCCGCCGTGCCCGGAGCCGGAGCGCACGCTGGGCACGGGCCCGCACTGCGACCCCACGGCGCTCACCATCCTCCTCCAGGACGACGTGGGCGGGCTGGAGGTCCTCGTCGACGGCGACTGGCGGCCCGTCCGCCCCGTCCCCGGCGCCATGGTCATCAACATCGGCGACACCTTCATGGCTCTGTCGAACGGGCGGTACAAGAGCTGCCTGCACCGGGCGGTGGTGAACCGGCGGCAGGAGCGGCGGTCGCTGGCCTTCTTCCTGTGCCCGCGCGAGGACCGGGTGGTGCGGCCGCCGCCGAGCCTGAGGAGCCCGCGGCAGTACCCGGACTTCACCTGGGCCGACCTCATGCGCTTCACGCAGCGCCACTACCGCGCCGACACGCGCACCCTCGACGCCTTCACCCAGTGGTTCTCCTCGGCCCAGGAGGCGGCCTGA
Protein Sequence
- >HORVU.MOREX.r3.3HG0307130.1
MVLQTAQQEPSLTRPPRCSVASAGSPAAMDTSPATPLLLQPPAPSIDPSAAKAAVSKGGGAATAVYDLRREPKIPAPFVWPHAEVRPTTAQELAVPVVDVGVLRNGDAAGIRRAVAQVASACATHGFFQVSGHGVDNALARAALDGASGFFRLPLAEKQRARRIPGTVSGYTSAHADRFASKLPWKETLSFGFHDRAGAAAPVVVDYFTSTLGPDYEPMGRVYQEYCGKMKELSLRIMELLELSLGVEKRGYYRDFFADSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDGDWRPVRPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNRRQERRSLAFFLCPREDRVVRPPPSLRSPRQYPDFTWADLMRFTQRHYRADTRTLDAFTQWFSSAQEAA