Gene Details:

  • Gene ID: GH_A05G0993
  • Gene Symbol: GhKCS6
  • Gene Name:
  • Genome: TM1_NBI
  • Species: Gossypium hirsutum

Functional Descriptions:

  • The GhKCS6-RNAi lines exhibited a significant decrease in fiber length when compared to the control suggesting that the sORF-associated GhKCS6 gene plays a significant role in regulating fiber length in cotton
  • We identified the GH_A05G0993 gene, which encodes a 3-ketoacyl-CoA synthase 6 (GhKCS6), associated with sORF that showed peaks of high expression and P-sites at 5 and 10 DPA fiber tissues compared to 20 DPA fiber tissues of normal fiber ZM24 cotton plant.
  • These findings were further supported by the overexpression and knockdown of GhKCS6, a gene associated with sORFs in cotton, and demonstrated the potential regulation of the mechanism governing fiber elongation on both the transcriptional and post-transcriptional levels.
  • GhKCS6 overexpression showed greater fiber length than the control and validated our approach.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
CDS Sequence
  • >GH_A05G0993
    ATGGAGTCGTTCTCTTTTTTGTTGATAATTTCAATTTTCTATCTTCTCTTCAAAATATGGAATTGGATCAATAACGTGAGAGACCAACAATGTTACATTTTGGATTACCAATGCTACAAGCCCAGTGATGATAGGATGGTGGGGACTGAGTTCTGCGGGGAAGTGATAAAGAGGAACAAGAATCTCGGACTCAACGAGTACAAGTTCTTGCTGAAAGCCATTGTCAGTTCAGGCATCGGAGAACAAACCTACGCCCCGAGGATCATGTTTTCCGGGAGAGAAGAGAGCCCGAAACTGGAAGATGGGATCTTGGAAATGGAAGAGTTTTTTCACGATAGCATCGAGAAGGTGTTATCAAGGGCAGGCATATCTCCTCAAGAAATCGATCTCTTAGTCGTCAATGTCTCCATGTTATCCACAGTTCCTTCTTTGTGTTCTCGGATCATAAACCACTACAAAATGAGACCAGACATCAAGTCTTTTAACTTAACTGGAATGGGGTGTAGTGCTAGTCTGATTTCTCTTGACATTGTTCGCAATGTCTTCAAGTCTTACAAGAACAAGTTCGCATTGCTTGTGACTTCGGAATCGTTGAGTCCGAATTGGTATGCTGGCAACGATAGATCGATGATTCTCTCCAATTGTTTGTTCCGTTCGGGTGGCTGCGCAGTACTTTTGACGAACAAGAAGTCCTTGAAGCATCGAGCAATGTTCAAATTGAAATGCTTGGTGAGAACACATCATGGAGCCAAAGATGAGTCGTATGGTTGTTGTATCCAAAGGGAAGATGATAAAGGAAGGATGGGATTTCACCTTAGCAAAAGCCTTCCCAAAGCCGCAACTCGTTCTTTCGTCGATAATTTGAGGGTCATCACCCCAAAGATCCTGCCTGTTAGGGAACTAGTCCGGTTCATGGCAGTTTCACTCCTTAAAAAATGGAACGTCGTCCGCCATGGTTCTTCCCACAAGGGAGCTTCTCAAGGACCAATCAAAGCTGGGGTGAACTTCAAGAGTGGGGTGGACCATTTCTGCATCCACACAGGAGGGAAAGCAGTGATAGATGGGATCGGAATAAGCCTTGATTTGACCGAGTATGATTTGGAGCCAGCTAGGATGACACTGCATCGATTTGGCAACACATCGGCAAGTAGCCTGTGGTATGTTTTGGCATACATGGAAGCCAAAAAGAGGCTGAAGAAAGGGGATAAGGTGTTGATGATAAGCTTTGGTGCTGGCTTTAAATGCAACAGTTGTTTGTGGGAGGTTGTAAGGGATTTAGGAGATGGGAATGTATGGAAAGATGAAATTTACATGTACCCACCAAAGACATTGGTTAATCCTTACATGGAAAAGTTTGGCTGGATTCAAGATGAAGATCCTAGCACCTTCAATCCCGGAGATTAA
Protein Sequence
  • >GH_A05G0993
    ATGGAGTCGTTCTCTTTTTTGTTGATAATTTCAATTTTCTATCTTCTCTTCAAAATATGGAATTGGATCAATAACGTGAGAGACCAACAATGTTACATTTTGGATTACCAATGCTACAAGCCCAGTGATGATAGGATGGTGGGGACTGAGTTCTGCGGGGAAGTGATAAAGAGGAACAAGAATCTCGGACTCAACGAGTACAAGTTCTTGCTGAAAGCCATTGTCAGTTCAGGCATCGGAGAACAAACCTACGCCCCGAGGATCATGTTTTCCGGGAGAGAAGAGAGCCCGAAACTGGAAGATGGGATCTTGGAAATGGAAGAGTTTTTTCACGATAGCATCGAGAAGGTGTTATCAAGGGCAGGCATATCTCCTCAAGAAATCGATCTCTTAGTCGTCAATGTCTCCATGTTATCCACAGTTCCTTCTTTGTGTTCTCGGATCATAAACCACTACAAAATGAGACCAGACATCAAGTCTTTTAACTTAACTGGAATGGGGTGTAGTGCTAGTCTGATTTCTCTTGACATTGTTCGCAATGTCTTCAAGTCTTACAAGAACAAGTTCGCATTGCTTGTGACTTCGGAATCGTTGAGTCCGAATTGGTATGCTGGCAACGATAGATCGATGATTCTCTCCAATTGTTTGTTCCGTTCGGGTGGCTGCGCAGTACTTTTGACGAACAAGAAGTCCTTGAAGCATCGAGCAATGTTCAAATTGAAATGCTTGGTGAGAACACATCATGGAGCCAAAGATGAGTCGTATGGTTGTTGTATCCAAAGGGAAGATGATAAAGGAAGGATGGGATTTCACCTTAGCAAAAGCCTTCCCAAAGCCGCAACTCGTTCTTTCGTCGATAATTTGAGGGTCATCACCCCAAAGATCCTGCCTGTTAGGGAACTAGTCCGGTTCATGGCAGTTTCACTCCTTAAAAAATGGAACGTCGTCCGCCATGGTTCTTCCCACAAGGGAGCTTCTCAAGGACCAATCAAAGCTGGGGTGAACTTCAAGAGTGGGGTGGACCATTTCTGCATCCACACAGGAGGGAAAGCAGTGATAGATGGGATCGGAATAAGCCTTGATTTGACCGAGTATGATTTGGAGCCAGCTAGGATGACACTGCATCGATTTGGCAACACATCGGCAAGTAGCCTGTGGTATGTTTTGGCATACATGGAAGCCAAAAAGAGGCTGAAGAAAGGGGATAAGGTGTTGATGATAAGCTTTGGTGCTGGCTTTAAATGCAACAGTTGTTTGTGGGAGGTTGTAAGGGATTTAGGAGATGGGAATGTATGGAAAGATGAAATTTACATGTACCCACCAAAGACATTGGTTAATCCTTACATGGAAAAGTTTGGCTGGATTCAAGATGAAGATCCTAGCACCTTCAATCCCGGAGATTAA