Gene Details:
- Gene ID: Glyma.01G240100
- Gene Symbol: Pd1
- Gene Name: dense pubescence 1
- Genome: Wm82.a4.v1
- Species: Glycine max
Functional Descriptions:
- A Pd1–Ps–P1 Feedback Loop Controls Pubescence Density in Soybean.
- The dense-pubescence phenotype of Pd1 was attributed to a T-C transition in the last exon of an HD-Zip transcription factor gene, and the glabrous phenotype of P1 was caused by a G–A transition in the first exon of a lipid transfer protein gene.
- Genetic and biochemical analyses revealed that Pd1 functions as a transcriptional activator that can bind the promoters of the P1 and Ps genes to induce their expression.
- Pd1 can also bind its own promoter and inhibit its gene transcription.
- Pd1, Ps, and P1 form a complex feedback loop to regulate pubescence formation in soybean.
- Our results demonstrate that Pd1, Ps, and P1 form a complex feedback loop to regulate pubescence formation in soybean.
Function-related keywords:
Literature:
- A Pd1-Ps-P1 Feedback Loop Controls Pubescence Density in Soybean. DOI: 10.1016/j.molp.2020.10.004 ; PMID: 33065270
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >Glyma.01G240100.1
ATTTTGCTTTGGCCCAAACTAAAACTCCATCAACTACTCCTTCACTTCCCTAATTCCCCCCACACCCATTCTTGTTTCTACCGTTCCAGTCATCATCAACATAACTAATTAAGGTTTACACCACTATCAAACGCTTAAGGTCCCCTCTCGCATATACGCGTGTTTAATTTTAGCTTTGACTTGCTTTGCTTTGCTTAGCTTAGTTAATTTCTGAGTGAGAGAAAGGGGTAACGGCTACGTCCCCCGCATTGAAATTGGTTACTTGACTAGCGTAATCATCTGTTTTGTCAAACCTTTCACACTCTCTACCCTTATTTTGTCTTTTCTGATTTCCCTAGCTTTTGTCTTTTGGGGTGGCAAGTTTTGCGTGTAAGATAAGAGTATTAAGGCCAACCAAGGCCAGGTAAAGTCACCAGTGCCTCTTTGCAACCTTAACATAAGAATGAATCTCCAAACAAACACTTGAAAGTGCTGCATATCGATCAGAGACAAAACAGCGGCACGAGCTGGTCGATGCTTTTATCAGTTTCAGCTTTGCGAGACGGTTCCATAAATCCCAATTGCAAGTACCATCAAACTTTACAGAGGGAAAGCGGTCGATTCATTGCTGTCATCTTCGTGGTTAATCTAACAGAGAAGCTATAGAGAAGAAGATTGCGGCTTGTGAACTTAAGGATTTAAGTGAAGTCAATGTTTGACACAAACATGTTTGATTCTCACCCTCACTTGCTTGATATGTCACCACCCCACAAGACTACTTGCTCTGAGAGTGATTTGGCAAAGCCCTGCAGAGATGATGAGTACGAGACCAAATCTATCACTGACACCATGGACGCTCCTTCTGGCGACGACCAAGATCCCAACCCGCGACCCAAAAAGAAGGGTTACCGCCGCCACACACAGCGCCAAATTGAAGAAATGGAAGCCTTCTTCAAGCAGTGTCCTCACCCGGATGACAAGCAAAGAAAAGAGCTGAGCCGTGAGCTGGGGTTAGAGCCTTTGCAAGTCAAGTTTTGGTTCCAAAACAAGCGCACCCAGATGAAGACTCAACATGAACGAAATGAAAATGCTATTTTGAAGGCAGAGAATGAAAAGCTTCGCGCTGAGAACAGCAGGTACAAGGAGGCCCTAACCAATGCTACATGCCCCAACTGTGGAGGCCCAGCTGCTCTTGGCGAAATGTCCTTCGACGAGCAACACTTGAGGATTGAGAATGCTCGGTTAAGAGAAGAGATCGATAGGATTTCAGGAATTGCTGCCAAATATGTTGGAAAGCCAGTGACTTCTTCGTACTCCAACCTCTCATCTCTGAATAACAACCACGTGCCTGTCGGTAACTATGGATCACAATCAGGCACGGTAGGAGAAATGTATGGAGGCAGTGACCTTTTTAGGCCACTCCCAGCTCCTGCTGATGCTGACAAACCCATGATTGTGGAGCTTGCTGTTGCAGCTATGGAGGAACTCACAAGACTAGCTCAGGCTGGAGAGCCTTTGTGGGTCCCAAGCAACCACCATTCTGAGATTCTAAATGAAGATGAATACTTGAGGACTTTCCCTACTAGAGGTTTAGGACCCAAACCCTTGGGCTTGAGATCAGAAGCTTCAAGGGAATCCGTGGTGGTCATCATGAATCACATTAACCTTATTGATATCCTTATGGATGTGAATCAATGGTCAACTGTGTTTTGCGGTATTGTCTCGAGAGCATTGACCCTTGAAGTCCTTTCAACTGGAATAGCAGGAAACTACAACGGAGCCTTGCAAGTGATGTCATCTGAGTTCCAAGTCGCTTCACCACTTGTTCCTACTCGTGAGAACTATTTCGTAAGGTACTGTAAGCAGCAACCAGATGGGATATGGGCAGTGGTGGATGTTTCCTTGGATAATCTGCGACCCAGTACAATCTCAAGAAGCCGAAGAAGGCCCTCTGGTTGTTTAATTCAAGAATTGCCAAACGGTTACTCCAAGGTTACATGGATTGAACATGTGGAAGTGGATGATAGAGCAGTGCATAGCATATATAGAACTCTGGTTAATTCGGGCCTGGCCTTTGGAGCTAAACGCTGGGTAGCTACATTAGAAAGACAATGCGAACGTCTTGCCAGTTCAATGGCCAACAACATACCAGCAGGGGACCTCTGTGTGATAACGAGTGCTGAGGGAAGGAAAAGTATGATGAAGCTGGCGGAGAGAATGGTAATGAGCTATTGCACTGGTGTTGGTGCTTCTACCGCGCATGCTTGGACAACGCTCTCCGCAACTGGATGTGATGATGTAAGGGTAATGACAAGAAAGAGCACCGACGAACCTGGCAGACCCCCCGGTATAGTGCTCAGTGCTGCCACTTCTTTTTGGCTTCCTGTTCCTCCAAAGAGGGTTTTTCATTTCCTACGTGATCAAAACTCAAGAAATGAGTGGGACATTCTCTCCAACGGGGGTCTAGTTCAAGAATTGGCACATATAGCAAATGGTCGTGATCCCGGCAACTGTGTCTCTTTACTTCGAGTCAATAGTGCAAATTCAAGCCAAAGCAACATGCTGATACTTCAAGAGAGTTGCACAGATTCAACTGGCTCATATGTAGTTTATGCTCCTGTGGATATTGTTGCTATGAATGTTGTCTTGAGTGGAGGGGATCCAGACTATGTTGCCCTGCTCCCCTCGGGCTTTGCTATTCTACCTGATGGGCCTCCTGCATTAAACGGTGGGCCCATACATGATGTTGGGTCTGGAGGTTCTCTACTCACAGTTGCATTCCAGATCTTAGTTGATTCAGCCCCAACTGCAAAGCTATCTCTGGGTTCAGTCGCCACTGTTAACAGTTTAATTAAGTGCACAGTTGAAAGGATCAAAGTTGCAGTCATACGTGACAACACCACCTGATTTCAGAACCTTCCATATATATTATATGTTAGAACAAGTTAAGAAAGTAACGAGCTTGGAGTGGTTCCTATTTCGTTTTCAAAACAAGGGCAAGAAGTCAATGAACGCACCTCGGAGTATCACTTCAACAACGTTAGAACTTCGAAGAATCTTAGGTTCGGGTATTGACTTTCACTCATATGAAGACTAAAGTGGTTCCATCCAGCTGTAATATTTTAACTTAGAAAAACTGCAAATTTCAGTCTCGCTATTTTACCGTAGAATTAATTTTGGCGTTGTATTTGTAGGCTTCGCTTAATCAAACTTCCTCAATTGTTGTTATGTTGACTTTTCCTATTGTATTGTAAACTGAAGCAAATTTTCATTTTTTTTTTGTCTAGTGTAGACGCAGATGTTAGAGTCAGTGTCACAAAGTCTTTTTTCTTTATCATGATTTTTTTTTACATTTTAGCTTTTTTATATTATCCTAACACTCTTCTATACATATCATTCCTGCAGTTAAAAAAAATTATATCATTATT
CDS Sequence
- >Glyma.01G240100.1
ATGTTTGACACAAACATGTTTGATTCTCACCCTCACTTGCTTGATATGTCACCACCCCACAAGACTACTTGCTCTGAGAGTGATTTGGCAAAGCCCTGCAGAGATGATGAGTACGAGACCAAATCTATCACTGACACCATGGACGCTCCTTCTGGCGACGACCAAGATCCCAACCCGCGACCCAAAAAGAAGGGTTACCGCCGCCACACACAGCGCCAAATTGAAGAAATGGAAGCCTTCTTCAAGCAGTGTCCTCACCCGGATGACAAGCAAAGAAAAGAGCTGAGCCGTGAGCTGGGGTTAGAGCCTTTGCAAGTCAAGTTTTGGTTCCAAAACAAGCGCACCCAGATGAAGACTCAACATGAACGAAATGAAAATGCTATTTTGAAGGCAGAGAATGAAAAGCTTCGCGCTGAGAACAGCAGGTACAAGGAGGCCCTAACCAATGCTACATGCCCCAACTGTGGAGGCCCAGCTGCTCTTGGCGAAATGTCCTTCGACGAGCAACACTTGAGGATTGAGAATGCTCGGTTAAGAGAAGAGATCGATAGGATTTCAGGAATTGCTGCCAAATATGTTGGAAAGCCAGTGACTTCTTCGTACTCCAACCTCTCATCTCTGAATAACAACCACGTGCCTGTCGGTAACTATGGATCACAATCAGGCACGGTAGGAGAAATGTATGGAGGCAGTGACCTTTTTAGGCCACTCCCAGCTCCTGCTGATGCTGACAAACCCATGATTGTGGAGCTTGCTGTTGCAGCTATGGAGGAACTCACAAGACTAGCTCAGGCTGGAGAGCCTTTGTGGGTCCCAAGCAACCACCATTCTGAGATTCTAAATGAAGATGAATACTTGAGGACTTTCCCTACTAGAGGTTTAGGACCCAAACCCTTGGGCTTGAGATCAGAAGCTTCAAGGGAATCCGTGGTGGTCATCATGAATCACATTAACCTTATTGATATCCTTATGGATGTGAATCAATGGTCAACTGTGTTTTGCGGTATTGTCTCGAGAGCATTGACCCTTGAAGTCCTTTCAACTGGAATAGCAGGAAACTACAACGGAGCCTTGCAAGTGATGTCATCTGAGTTCCAAGTCGCTTCACCACTTGTTCCTACTCGTGAGAACTATTTCGTAAGGTACTGTAAGCAGCAACCAGATGGGATATGGGCAGTGGTGGATGTTTCCTTGGATAATCTGCGACCCAGTACAATCTCAAGAAGCCGAAGAAGGCCCTCTGGTTGTTTAATTCAAGAATTGCCAAACGGTTACTCCAAGGTTACATGGATTGAACATGTGGAAGTGGATGATAGAGCAGTGCATAGCATATATAGAACTCTGGTTAATTCGGGCCTGGCCTTTGGAGCTAAACGCTGGGTAGCTACATTAGAAAGACAATGCGAACGTCTTGCCAGTTCAATGGCCAACAACATACCAGCAGGGGACCTCTGTGTGATAACGAGTGCTGAGGGAAGGAAAAGTATGATGAAGCTGGCGGAGAGAATGGTAATGAGCTATTGCACTGGTGTTGGTGCTTCTACCGCGCATGCTTGGACAACGCTCTCCGCAACTGGATGTGATGATGTAAGGGTAATGACAAGAAAGAGCACCGACGAACCTGGCAGACCCCCCGGTATAGTGCTCAGTGCTGCCACTTCTTTTTGGCTTCCTGTTCCTCCAAAGAGGGTTTTTCATTTCCTACGTGATCAAAACTCAAGAAATGAGTGGGACATTCTCTCCAACGGGGGTCTAGTTCAAGAATTGGCACATATAGCAAATGGTCGTGATCCCGGCAACTGTGTCTCTTTACTTCGAGTCAATAGTGCAAATTCAAGCCAAAGCAACATGCTGATACTTCAAGAGAGTTGCACAGATTCAACTGGCTCATATGTAGTTTATGCTCCTGTGGATATTGTTGCTATGAATGTTGTCTTGAGTGGAGGGGATCCAGACTATGTTGCCCTGCTCCCCTCGGGCTTTGCTATTCTACCTGATGGGCCTCCTGCATTAAACGGTGGGCCCATACATGATGTTGGGTCTGGAGGTTCTCTACTCACAGTTGCATTCCAGATCTTAGTTGATTCAGCCCCAACTGCAAAGCTATCTCTGGGTTCAGTCGCCACTGTTAACAGTTTAATTAAGTGCACAGTTGAAAGGATCAAAGTTGCAGTCATACGTGACAACACCACCTGA
Protein Sequence
- >Glyma.01G240100.1
MFDTNMFDSHPHLLDMSPPHKTTCSESDLAKPCRDDEYETKSITDTMDAPSGDDQDPNPRPKKKGYRRHTQRQIEEMEAFFKQCPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERNENAILKAENEKLRAENSRYKEALTNATCPNCGGPAALGEMSFDEQHLRIENARLREEIDRISGIAAKYVGKPVTSSYSNLSSLNNNHVPVGNYGSQSGTVGEMYGGSDLFRPLPAPADADKPMIVELAVAAMEELTRLAQAGEPLWVPSNHHSEILNEDEYLRTFPTRGLGPKPLGLRSEASRESVVVIMNHINLIDILMDVNQWSTVFCGIVSRALTLEVLSTGIAGNYNGALQVMSSEFQVASPLVPTRENYFVRYCKQQPDGIWAVVDVSLDNLRPSTISRSRRRPSGCLIQELPNGYSKVTWIEHVEVDDRAVHSIYRTLVNSGLAFGAKRWVATLERQCERLASSMANNIPAGDLCVITSAEGRKSMMKLAERMVMSYCTGVGASTAHAWTTLSATGCDDVRVMTRKSTDEPGRPPGIVLSAATSFWLPVPPKRVFHFLRDQNSRNEWDILSNGGLVQELAHIANGRDPGNCVSLLRVNSANSSQSNMLILQESCTDSTGSYVVYAPVDIVAMNVVLSGGDPDYVALLPSGFAILPDGPPALNGGPIHDVGSGGSLLTVAFQILVDSAPTAKLSLGSVATVNSLIKCTVERIKVAVIRDNTT*