Information report for Pd1
Gene Details
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Functional Descriptions
- A Pd1–Ps–P1 Feedback Loop Controls Pubescence Density in Soybean.
- The dense-pubescence phenotype of Pd1 was attributed to a T-C transition in the last exon of an HD-Zip transcription factor gene, and the glabrous phenotype of P1 was caused by a G–A transition in the first exon of a lipid transfer protein gene.
- Genetic and biochemical analyses revealed that Pd1 functions as a transcriptional activator that can bind the promoters of the P1 and Ps genes to induce their expression.
- Pd1 can also bind its own promoter and inhibit its gene transcription.
- Pd1, Ps, and P1 form a complex feedback loop to regulate pubescence formation in soybean.
- Our results demonstrate that Pd1, Ps, and P1 form a complex feedback loop to regulate pubescence formation in soybean.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: 100815499
- UniProt accessions: I1JAV7
- EMBL: CM000834
- EnsemblPlants: KRH77881
- Gramene: KRH77881
- KEGG: gmx:100815499
- GO: GO:0000981 , GO:0003677 , GO:0005634 , GO:0008289
- OMA: QCPHPDD
- InterPro: IPR001356 , IPR002913 , IPR009057 , IPR017970 , IPR023393 , IPR042160
- PANTHER: PTHR45654 , PTHR45654:SF77
- SUPFAM: SSF46689 , SSF55961
- PROSITE: PS00027 , PS50071 , PS50848
- Gene3D: 1.10.10.60 , 3.30.530.20
- OrthoDB: I1JAV7
- SMR: I1JAV7
- CDD: cd00086 , cd08875
Sequences
cDNA Sequence
- >Glyma.01G240100.1
ATTTTGCTTTGGCCCAAACTAAAACTCCATCAACTACTCCTTCACTTCCCTAATTCCCCCCACACCCATTCTTGTTTCTACCGTTCCAGTCATCATCAACATAACTAATTAAGGTTTACACCACTATCAAACGCTTAAGGTCCCCTCTCGCATATACGCGTGTTTAATTTTAGCTTTGACTTGCTTTGCTTTGCTTAGCTTAGTTAATTTCTGAGTGAGAGAAAGGGGTAACGGCTACGTCCCCCGCATTGAAATTGGTTACTTGACTAGCGTAATCATCTGTTTTGTCAAACCTTTCACACTCTCTACCCTTATTTTGTCTTTTCTGATTTCCCTAGCTTTTGTCTTTTGGGGTGGCAAGTTTTGCGTGTAAGATAAGAGTATTAAGGCCAACCAAGGCCAGGTAAAGTCACCAGTGCCTCTTTGCAACCTTAACATAAGAATGAATCTCCAAACAAACACTTGAAAGTGCTGCATATCGATCAGAGACAAAACAGCGGCACGAGCTGGTCGATGCTTTTATCAGTTTCAGCTTTGCGAGACGGTTCCATAAATCCCAATTGCAAGTACCATCAAACTTTACAGAGGGAAAGCGGTCGATTCATTGCTGTCATCTTCGTGGTTAATCTAACAGAGAAGCTATAGAGAAGAAGATTGCGGCTTGTGAACTTAAGGATTTAAGTGAAGTCAATGTTTGACACAAACATGTTTGATTCTCACCCTCACTTGCTTGATATGTCACCACCCCACAAGACTACTTGCTCTGAGAGTGATTTGGCAAAGCCCTGCAGAGATGATGAGTACGAGACCAAATCTATCACTGACACCATGGACGCTCCTTCTGGCGACGACCAAGATCCCAACCCGCGACCCAAAAAGAAGGGTTACCGCCGCCACACACAGCGCCAAATTGAAGAAATGGAAGCCTTCTTCAAGCAGTGTCCTCACCCGGATGACAAGCAAAGAAAAGAGCTGAGCCGTGAGCTGGGGTTAGAGCCTTTGCAAGTCAAGTTTTGGTTCCAAAACAAGCGCACCCAGATGAAGACTCAACATGAACGAAATGAAAATGCTATTTTGAAGGCAGAGAATGAAAAGCTTCGCGCTGAGAACAGCAGGTACAAGGAGGCCCTAACCAATGCTACATGCCCCAACTGTGGAGGCCCAGCTGCTCTTGGCGAAATGTCCTTCGACGAGCAACACTTGAGGATTGAGAATGCTCGGTTAAGAGAAGAGATCGATAGGATTTCAGGAATTGCTGCCAAATATGTTGGAAAGCCAGTGACTTCTTCGTACTCCAACCTCTCATCTCTGAATAACAACCACGTGCCTGTCGGTAACTATGGATCACAATCAGGCACGGTAGGAGAAATGTATGGAGGCAGTGACCTTTTTAGGCCACTCCCAGCTCCTGCTGATGCTGACAAACCCATGATTGTGGAGCTTGCTGTTGCAGCTATGGAGGAACTCACAAGACTAGCTCAGGCTGGAGAGCCTTTGTGGGTCCCAAGCAACCACCATTCTGAGATTCTAAATGAAGATGAATACTTGAGGACTTTCCCTACTAGAGGTTTAGGACCCAAACCCTTGGGCTTGAGATCAGAAGCTTCAAGGGAATCCGTGGTGGTCATCATGAATCACATTAACCTTATTGATATCCTTATGGATGTGAATCAATGGTCAACTGTGTTTTGCGGTATTGTCTCGAGAGCATTGACCCTTGAAGTCCTTTCAACTGGAATAGCAGGAAACTACAACGGAGCCTTGCAAGTGATGTCATCTGAGTTCCAAGTCGCTTCACCACTTGTTCCTACTCGTGAGAACTATTTCGTAAGGTACTGTAAGCAGCAACCAGATGGGATATGGGCAGTGGTGGATGTTTCCTTGGATAATCTGCGACCCAGTACAATCTCAAGAAGCCGAAGAAGGCCCTCTGGTTGTTTAATTCAAGAATTGCCAAACGGTTACTCCAAGGTTACATGGATTGAACATGTGGAAGTGGATGATAGAGCAGTGCATAGCATATATAGAACTCTGGTTAATTCGGGCCTGGCCTTTGGAGCTAAACGCTGGGTAGCTACATTAGAAAGACAATGCGAACGTCTTGCCAGTTCAATGGCCAACAACATACCAGCAGGGGACCTCTGTGTGATAACGAGTGCTGAGGGAAGGAAAAGTATGATGAAGCTGGCGGAGAGAATGGTAATGAGCTATTGCACTGGTGTTGGTGCTTCTACCGCGCATGCTTGGACAACGCTCTCCGCAACTGGATGTGATGATGTAAGGGTAATGACAAGAAAGAGCACCGACGAACCTGGCAGACCCCCCGGTATAGTGCTCAGTGCTGCCACTTCTTTTTGGCTTCCTGTTCCTCCAAAGAGGGTTTTTCATTTCCTACGTGATCAAAACTCAAGAAATGAGTGGGACATTCTCTCCAACGGGGGTCTAGTTCAAGAATTGGCACATATAGCAAATGGTCGTGATCCCGGCAACTGTGTCTCTTTACTTCGAGTCAATAGTGCAAATTCAAGCCAAAGCAACATGCTGATACTTCAAGAGAGTTGCACAGATTCAACTGGCTCATATGTAGTTTATGCTCCTGTGGATATTGTTGCTATGAATGTTGTCTTGAGTGGAGGGGATCCAGACTATGTTGCCCTGCTCCCCTCGGGCTTTGCTATTCTACCTGATGGGCCTCCTGCATTAAACGGTGGGCCCATACATGATGTTGGGTCTGGAGGTTCTCTACTCACAGTTGCATTCCAGATCTTAGTTGATTCAGCCCCAACTGCAAAGCTATCTCTGGGTTCAGTCGCCACTGTTAACAGTTTAATTAAGTGCACAGTTGAAAGGATCAAAGTTGCAGTCATACGTGACAACACCACCTGATTTCAGAACCTTCCATATATATTATATGTTAGAACAAGTTAAGAAAGTAACGAGCTTGGAGTGGTTCCTATTTCGTTTTCAAAACAAGGGCAAGAAGTCAATGAACGCACCTCGGAGTATCACTTCAACAACGTTAGAACTTCGAAGAATCTTAGGTTCGGGTATTGACTTTCACTCATATGAAGACTAAAGTGGTTCCATCCAGCTGTAATATTTTAACTTAGAAAAACTGCAAATTTCAGTCTCGCTATTTTACCGTAGAATTAATTTTGGCGTTGTATTTGTAGGCTTCGCTTAATCAAACTTCCTCAATTGTTGTTATGTTGACTTTTCCTATTGTATTGTAAACTGAAGCAAATTTTCATTTTTTTTTTGTCTAGTGTAGACGCAGATGTTAGAGTCAGTGTCACAAAGTCTTTTTTCTTTATCATGATTTTTTTTTACATTTTAGCTTTTTTATATTATCCTAACACTCTTCTATACATATCATTCCTGCAGTTAAAAAAAATTATATCATTATT
CDS Sequence
- >Glyma.01G240100.1
ATGTTTGACACAAACATGTTTGATTCTCACCCTCACTTGCTTGATATGTCACCACCCCACAAGACTACTTGCTCTGAGAGTGATTTGGCAAAGCCCTGCAGAGATGATGAGTACGAGACCAAATCTATCACTGACACCATGGACGCTCCTTCTGGCGACGACCAAGATCCCAACCCGCGACCCAAAAAGAAGGGTTACCGCCGCCACACACAGCGCCAAATTGAAGAAATGGAAGCCTTCTTCAAGCAGTGTCCTCACCCGGATGACAAGCAAAGAAAAGAGCTGAGCCGTGAGCTGGGGTTAGAGCCTTTGCAAGTCAAGTTTTGGTTCCAAAACAAGCGCACCCAGATGAAGACTCAACATGAACGAAATGAAAATGCTATTTTGAAGGCAGAGAATGAAAAGCTTCGCGCTGAGAACAGCAGGTACAAGGAGGCCCTAACCAATGCTACATGCCCCAACTGTGGAGGCCCAGCTGCTCTTGGCGAAATGTCCTTCGACGAGCAACACTTGAGGATTGAGAATGCTCGGTTAAGAGAAGAGATCGATAGGATTTCAGGAATTGCTGCCAAATATGTTGGAAAGCCAGTGACTTCTTCGTACTCCAACCTCTCATCTCTGAATAACAACCACGTGCCTGTCGGTAACTATGGATCACAATCAGGCACGGTAGGAGAAATGTATGGAGGCAGTGACCTTTTTAGGCCACTCCCAGCTCCTGCTGATGCTGACAAACCCATGATTGTGGAGCTTGCTGTTGCAGCTATGGAGGAACTCACAAGACTAGCTCAGGCTGGAGAGCCTTTGTGGGTCCCAAGCAACCACCATTCTGAGATTCTAAATGAAGATGAATACTTGAGGACTTTCCCTACTAGAGGTTTAGGACCCAAACCCTTGGGCTTGAGATCAGAAGCTTCAAGGGAATCCGTGGTGGTCATCATGAATCACATTAACCTTATTGATATCCTTATGGATGTGAATCAATGGTCAACTGTGTTTTGCGGTATTGTCTCGAGAGCATTGACCCTTGAAGTCCTTTCAACTGGAATAGCAGGAAACTACAACGGAGCCTTGCAAGTGATGTCATCTGAGTTCCAAGTCGCTTCACCACTTGTTCCTACTCGTGAGAACTATTTCGTAAGGTACTGTAAGCAGCAACCAGATGGGATATGGGCAGTGGTGGATGTTTCCTTGGATAATCTGCGACCCAGTACAATCTCAAGAAGCCGAAGAAGGCCCTCTGGTTGTTTAATTCAAGAATTGCCAAACGGTTACTCCAAGGTTACATGGATTGAACATGTGGAAGTGGATGATAGAGCAGTGCATAGCATATATAGAACTCTGGTTAATTCGGGCCTGGCCTTTGGAGCTAAACGCTGGGTAGCTACATTAGAAAGACAATGCGAACGTCTTGCCAGTTCAATGGCCAACAACATACCAGCAGGGGACCTCTGTGTGATAACGAGTGCTGAGGGAAGGAAAAGTATGATGAAGCTGGCGGAGAGAATGGTAATGAGCTATTGCACTGGTGTTGGTGCTTCTACCGCGCATGCTTGGACAACGCTCTCCGCAACTGGATGTGATGATGTAAGGGTAATGACAAGAAAGAGCACCGACGAACCTGGCAGACCCCCCGGTATAGTGCTCAGTGCTGCCACTTCTTTTTGGCTTCCTGTTCCTCCAAAGAGGGTTTTTCATTTCCTACGTGATCAAAACTCAAGAAATGAGTGGGACATTCTCTCCAACGGGGGTCTAGTTCAAGAATTGGCACATATAGCAAATGGTCGTGATCCCGGCAACTGTGTCTCTTTACTTCGAGTCAATAGTGCAAATTCAAGCCAAAGCAACATGCTGATACTTCAAGAGAGTTGCACAGATTCAACTGGCTCATATGTAGTTTATGCTCCTGTGGATATTGTTGCTATGAATGTTGTCTTGAGTGGAGGGGATCCAGACTATGTTGCCCTGCTCCCCTCGGGCTTTGCTATTCTACCTGATGGGCCTCCTGCATTAAACGGTGGGCCCATACATGATGTTGGGTCTGGAGGTTCTCTACTCACAGTTGCATTCCAGATCTTAGTTGATTCAGCCCCAACTGCAAAGCTATCTCTGGGTTCAGTCGCCACTGTTAACAGTTTAATTAAGTGCACAGTTGAAAGGATCAAAGTTGCAGTCATACGTGACAACACCACCTGA
Protein Sequence
- >Glyma.01G240100.1
MFDTNMFDSHPHLLDMSPPHKTTCSESDLAKPCRDDEYETKSITDTMDAPSGDDQDPNPRPKKKGYRRHTQRQIEEMEAFFKQCPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERNENAILKAENEKLRAENSRYKEALTNATCPNCGGPAALGEMSFDEQHLRIENARLREEIDRISGIAAKYVGKPVTSSYSNLSSLNNNHVPVGNYGSQSGTVGEMYGGSDLFRPLPAPADADKPMIVELAVAAMEELTRLAQAGEPLWVPSNHHSEILNEDEYLRTFPTRGLGPKPLGLRSEASRESVVVIMNHINLIDILMDVNQWSTVFCGIVSRALTLEVLSTGIAGNYNGALQVMSSEFQVASPLVPTRENYFVRYCKQQPDGIWAVVDVSLDNLRPSTISRSRRRPSGCLIQELPNGYSKVTWIEHVEVDDRAVHSIYRTLVNSGLAFGAKRWVATLERQCERLASSMANNIPAGDLCVITSAEGRKSMMKLAERMVMSYCTGVGASTAHAWTTLSATGCDDVRVMTRKSTDEPGRPPGIVLSAATSFWLPVPPKRVFHFLRDQNSRNEWDILSNGGLVQELAHIANGRDPGNCVSLLRVNSANSSQSNMLILQESCTDSTGSYVVYAPVDIVAMNVVLSGGDPDYVALLPSGFAILPDGPPALNGGPIHDVGSGGSLLTVAFQILVDSAPTAKLSLGSVATVNSLIKCTVERIKVAVIRDNTT*