Information report for GmFATA1
Gene Details
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Functional Descriptions
- The acyl–acyl carrier protein thioesterases GmFATA1 and GmFATA2 are essential for fatty acid accumulation and growth in soybean.
- Using CRISPR/Cas9 gene editing mutation of GmFATA1 or 2 led to reduced leaf FA content and growth defect at the early seedling stage.
- Combined transcriptomic and lipidomic analysis revealed a large number of genes involved in FA synthesis and FA chain elongation are expressed at reduced level in the GmFATA1 mutant, accompanied by a lower triacylglycerol abundance at the early seedling stage.
- Overexpression of GmFATA in soybean led to significant increases in leaf FA content by 5.7%, vegetative growth, and seed yield by 26.9%, and seed FA content by 23.2%. Thus, overexpression of GmFATA is an effective strategy to enhance soybean oil content and yield.
Functional Keywords
- leaf , growth , seedling , seed , yield , vegetative , seed-growth , seedling-growth , triacylglycerol , oil-content , fatty-acid , protein
Literature and News
Gene Resources
- NCBI ID: 100795986
- UniProt accessions: I1N272
- EMBL: CM000851
- EnsemblPlants: KRG99733
- Gramene: KRG99733
- KEGG: gmx:100795986
- GO: GO:0000036 , GO:0009507 , GO:0016297
- OMA: LVFCPQE
- InterPro: IPR002864 , IPR029069 , IPR045023 , IPR049427
- PANTHER: PTHR31727 , PTHR31727:SF6
- SUPFAM: SSF54637
- Gene3D: 3.10.129.10
- OrthoDB: I1N272
- SMR: I1N272
- CDD: cd00586
Sequences
cDNA Sequence
- >Glyma.18G167300.1
ATTCTCATACGCACCCAGTCACCCAGCTTTCCCTTTTTCCTATTTTTTTTCTCTTTTTTTATTAAAAAAATAAAAATGTTGAAGCTTTCGTGCAATGGCTTGGACCGGGCTCACTCCCTGGCCCAATGCGGCTTCGCGGGCCGGCCCGCCTGCGCCGTCCCTCGCCGGAGGAGGAGCGGCGTCTCCGGATTCCGGTTGCCGGAAGGCAGGTCGATCCGGGTGTCCGCGGCGGTGTCGGCAAAGGACGGCGCGGTGGCGACCCGGGTAGAGGCGGATCCCGGTACGCTGGCGGACCGGCTGAGGGTGGGGAGCTTGACGGAGGATGGGTTGTCTTATAAGGAGAAGTTCATTGTGAGGAGCTACGAAGTTGGGATCAATAAGACTGCCACTGTTGAAACCATTGCCAATCTCTTGCAGGAGGTTGGATGTAATCATGCTCAGAGTGTTGGATATTCTACTGATGGTTTTGCAACCACCCCTACGATGAGAAAATTGCGTCTCATATGGGTTACTGCTCGCATGCACATTGAAATCTACAAATACCCTGCTTGGAGTGACATTGTTGAGATAGAGACATGGTGCCAAGGGGAAGGAAGGGTTGGGACAAGGCGTGATTTTATACTGAAAGACTATGCAACTGATGAAGTTATTGGAAGGGCAACAAGCAAATGGGTAATGATGAATCAGGACACCAGACGACTCCAGAAGGTTTCTGATGATGTTAAAGAAGAGTATTTGGTTTTCTGTCCTCGAGAGCCCAGGTTAGCTATTCCAGAGGCAGATAGTAATAGCTTGAAGAAAATACCAAAATTGGAAGACCCTGCTCAGTATTCCAGACTTGGACTTGTGCCAAGAAGAGCGGATCTGGACATGAATCAGCATGTTAACAATGTCACCTATATTGGATGGGTGCTTGAGAGCATGCCTCAAGAAATCATTGATAGCCATGAGTTGCAGAGTATTACCTTGGATTACAGACGAGAGTGCGGACAACATGACATAGTCGATTCCCTCACTAGTGTGGAAGCGATACAGGGTGGTGCCGAGGCAGTTCCAGAACTGAAAGGTACAAATGGATCTGCCACGGCAAGGGAAGACAAACATGAACACCAGCAGTTTCTGCATCTACTTAGGTTGTCTACTGAAGGACTTGAGATAAACCGGGGACGAACAGAATGGAGAAAGAAAGCTCCAAGATGAGAACCATTATGTGTGCTTCCACCCGAATCCATGATTCTGTTTTTGTCTTGTGTTGTTTCATGTTACCAGGGTTGTCTTATCAATTTTCCCTTGATATTTTGCTTAGAGTTTGTGCGCTTAATAGGGATTGAAGAGTTAAAATATTGCTTCTGTTTTCTTGTCATGCTCAAAAATTTAAGTTGTCCAAATCCCGTAGTTAGGCTATATAGGTTGACATCAATCTCTGATCCATTAGTATCAGATTCCATGAATGTCATTGTACCTTAAGGGAGCATAGAAATCCAGGAAGTTGGTATGGATCTGCCATCTACTGCATGACTTGAACAATGTGTGTTAAAATAATCATTTTGAAATAATTCAATTAGCTAATTATTAATGTTCTTACTAATCTTGTTGTCTCCATTTATCAAAAGTAACTTTTGCTTATTATCATTACGTACTGCAGTGCATGTTTATCCGAAGAATGTGGCATTTGAGATAGTGGCTATGCTTGCCATTGCAATAGGCTATTAAAAAGTACAAATTTTTATTTAAATATTTTAGAATCTTTAATTACAAACTGTGTTGTTCTAAAGTGTTACTTTTATGAAATAAACTGTAAGGTGTGTCATTATTTCACTGTATTTTCCGGTGGTGGTAGCACTTTGTTCTATGCATATATGTGGCCGTGTACTGTAGTATATACCCTGAGCAGAATAGTACAATACAAATAGCCAAGTCATAATGTATATTTTTTTGTTTGTTATGGTAGTAGATGCATTATGCAAGCAGTTTT
CDS Sequence
- >Glyma.18G167300.1
ATGTTGAAGCTTTCGTGCAATGGCTTGGACCGGGCTCACTCCCTGGCCCAATGCGGCTTCGCGGGCCGGCCCGCCTGCGCCGTCCCTCGCCGGAGGAGGAGCGGCGTCTCCGGATTCCGGTTGCCGGAAGGCAGGTCGATCCGGGTGTCCGCGGCGGTGTCGGCAAAGGACGGCGCGGTGGCGACCCGGGTAGAGGCGGATCCCGGTACGCTGGCGGACCGGCTGAGGGTGGGGAGCTTGACGGAGGATGGGTTGTCTTATAAGGAGAAGTTCATTGTGAGGAGCTACGAAGTTGGGATCAATAAGACTGCCACTGTTGAAACCATTGCCAATCTCTTGCAGGAGGTTGGATGTAATCATGCTCAGAGTGTTGGATATTCTACTGATGGTTTTGCAACCACCCCTACGATGAGAAAATTGCGTCTCATATGGGTTACTGCTCGCATGCACATTGAAATCTACAAATACCCTGCTTGGAGTGACATTGTTGAGATAGAGACATGGTGCCAAGGGGAAGGAAGGGTTGGGACAAGGCGTGATTTTATACTGAAAGACTATGCAACTGATGAAGTTATTGGAAGGGCAACAAGCAAATGGGTAATGATGAATCAGGACACCAGACGACTCCAGAAGGTTTCTGATGATGTTAAAGAAGAGTATTTGGTTTTCTGTCCTCGAGAGCCCAGGTTAGCTATTCCAGAGGCAGATAGTAATAGCTTGAAGAAAATACCAAAATTGGAAGACCCTGCTCAGTATTCCAGACTTGGACTTGTGCCAAGAAGAGCGGATCTGGACATGAATCAGCATGTTAACAATGTCACCTATATTGGATGGGTGCTTGAGAGCATGCCTCAAGAAATCATTGATAGCCATGAGTTGCAGAGTATTACCTTGGATTACAGACGAGAGTGCGGACAACATGACATAGTCGATTCCCTCACTAGTGTGGAAGCGATACAGGGTGGTGCCGAGGCAGTTCCAGAACTGAAAGGTACAAATGGATCTGCCACGGCAAGGGAAGACAAACATGAACACCAGCAGTTTCTGCATCTACTTAGGTTGTCTACTGAAGGACTTGAGATAAACCGGGGACGAACAGAATGGAGAAAGAAAGCTCCAAGATGA
Protein Sequence
- >Glyma.18G167300.1
MLKLSCNGLDRAHSLAQCGFAGRPACAVPRRRRSGVSGFRLPEGRSIRVSAAVSAKDGAVATRVEADPGTLADRLRVGSLTEDGLSYKEKFIVRSYEVGINKTATVETIANLLQEVGCNHAQSVGYSTDGFATTPTMRKLRLIWVTARMHIEIYKYPAWSDIVEIETWCQGEGRVGTRRDFILKDYATDEVIGRATSKWVMMNQDTRRLQKVSDDVKEEYLVFCPREPRLAIPEADSNSLKKIPKLEDPAQYSRLGLVPRRADLDMNQHVNNVTYIGWVLESMPQEIIDSHELQSITLDYRRECGQHDIVDSLTSVEAIQGGAEAVPELKGTNGSATAREDKHEHQQFLHLLRLSTEGLEINRGRTEWRKKAPR*