Information report for GmZF392
Gene Details
|
|
Functional Descriptions
- GmZF392, a tandem CCCH zinc finger (TZF) protein which was identified in our previous RNA-seq analysis of seed-preferred transcription factors, was found to function as a positive regulator of lipid production.
- GmZF392 physically interacts with GmZF351, our previously identified transcriptional regulator of lipid biosynthesis, to synergistically promote downstream gene expression.
- GmZF392 promoter may have been selected at the origin of the Glycine genus and further mildly selected during domestication from wild soybeans to cultivated soybeans.
- GmZF392 promotes seed oil accumulation in both transgenic Arabidopsis and stable transgenic soybean plants by binding to a bipartite cis-element, containing TG- and TA-rich sequences, in promoter regions, activating the expression of genes in the lipid biosynthesis pathway.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: 100787049
- UniProt accessions: I1LUH8
- EMBL: CM000845 , KT031155
- EnsemblPlants: KRH26966
- Gramene: KRH26966
- KEGG: gmx:100787049
- GO: GO:0003677 , GO:0008270
- OMA: HNWNSKV
- InterPro: IPR000571 , IPR041367 , IPR045234
- PANTHER: PTHR14493 , PTHR14493:SF90
- PROSITE: PS50103
- Gene3D: 3.30.1370.210
- OrthoDB: I1LUH8
- SMR: I1LUH8
Sequences
cDNA Sequence
- >Glyma.12G205700.2
GGAGCCCTCTTGGGCACACCCTAACGTGATCTAGAATTTTCATGTTAGCTGTGATGCCCCAAAATGTAATCCAAACCCTTCAGAGATATTTGTAAACAGAGAGCTTGTAAGAGAATTACACATAGCCAAAATTCCTGCTCCCAATGAATTATCAAACTGCCACATACCCTCTTTTGCATGCTGATCCCAAATGCTACGCAGCCACGCCATCTCCTTCAATGTCCCCACACCCCATCCTTGACACCCTTTCTCTCTCATCTCACTTTCTCTCTCCTCAACCACCCTATATAACTCACCCCTTTGTTTCCCTCCACATTAACACATCATACACTCACCATTGTGTTGAGACACACTCTCTTTCTTTCTTGTTATTCTCTTTCTCTTTCATCATTTGGCTTAAAACACACACACAAAAGGTGGCCAAAATGAGCAGTGTCTGTGCCAAGCAGCACAAGTTTTACCCCTCTCACCAACTCCTTTCTCCAAAGAAAACCCTCAGAGAAATTGACATCCCTCCAAGGAAGCTCCTCACTCGCCGTGCCGCCGCATGCGTCGGCGGCACCGACGTGTACTCCTCCGAGGAGACCATGCTGCAAAAGTTCCTCCCTTCCAACGATTCTGACGAGGACGACCCTTACTCCTCAGACCACTTCCGGATGTTCGAGTTCAAGGTCCGCCGGTGCACCCGAAGCCGGAGCCACGACTGGACCGACTGCCCCTTCGCCCATCCGGGTGAAAAGGCACGCCGCCGTGACCCACGGCGGTATCACTACTCAGGAACAGTCTGTCCTGAGTATCCCCGCGGAGGGTGCAGCCGTGGCGATGCATGCGAATACGCCCATGGCGTGTTCGAATGCTGGCTGCACCCTTCCAGGTACAGAACGGAGGCCTGTAAGGATGGCAGGAACTGCAAGAGAAAGGTGTGTTTTTTCGCACACACCCCTCGCCAGCTGAGAATTTTGCCGGTAACAACATCTTCACCCTCTTCAAATGACATGCCATGCAAGAAGAACCTTAACAAACTCTTAAACCATGCTTCAAAATCAAACAACAACAACAACAACAACTGTTGTTTGTTTTGCCATTGTGGTGCTTCCTCTTCAGTTTCTCCAACCTCCACACTCTTCGGCATGTCGCATTTCTCGCCACCAGTATCACCATCCTCGTCCTCTTCACCACCTCCTTCTCCATTGAAACCCCGAAGCGTGGTTTCTCCTATTTCTCCAATTTCCCGTTACAGTGCTGTGAATATGAACCCTCATCACGGGGTGGTGAGTTACAAAGACATGTTCGCTGAGTTGGTGAATTCTTTGGAGGGTTTGAGTTTCAACGAGGGTTCTCCTGTTTCTGGTGCTAAAGCACCGAACTTTCCTTGGCTTGATGTTTCTCTTGAGGAACAGCAACAACAACAAAATCCTTTCATTGTTTCTTCTTTTGGCTGCGAAGATAAACAGAACCAGTTTATTTTTTCACCACCGTCCATTCAGACACCGACAAATGGGAAGTTCTGTCGCAACAGATTCATGGGCAACGACAACAAGGTTGTCGGTGGTGCTGACGTTAATGGCCCAGATCTCGCGTGGGTGAACGAGTTGCTGATGTAATAGGTGAAAGATGGTGACGACGAAAATTAATGGTAGTGATCGATGACTCATATCAGTGAATGAAAGTGTAAATACAGCAGAGAAACATTAAAAAAAAAAAAAAACGTCTCTGGCGTATCTATTGTCATTGTTAATTACTATTGCTTAATTAAGGTTTCATTGCTTTCTGAATTTGTTGTTAAGTTTGAGACAATTTATGTAATTTGGATTTCATCTTGTTTTTAATGTATAAGGGAATATTTTGACTC
CDS Sequence
- >Glyma.12G205700.2
ATGAATTATCAAACTGCCACATACCCTCTTTTGCATGCTGATCCCAAATGCTACGCAGCCACGCCATCTCCTTCAATGTCCCCACACCCCATCCTTGACACCCTTTCTCTCTCATCTCACTTTCTCTCTCCTCAACCACCCTATATAACTCACCCCTTTGTTTCCCTCCACATTAACACATCATACACTCACCATTGTGTTGAGACACACTCTCTTTCTTTCTTGTTATTCTCTTTCTCTTTCATCATTTGGCTTAAAACACACACACAAAAGGTGGCCAAAATGAGCAGTGTCTGTGCCAAGCAGCACAAGTTTTACCCCTCTCACCAACTCCTTTCTCCAAAGAAAACCCTCAGAGAAATTGACATCCCTCCAAGGAAGCTCCTCACTCGCCGTGCCGCCGCATGCGTCGGCGGCACCGACGTGTACTCCTCCGAGGAGACCATGCTGCAAAAGTTCCTCCCTTCCAACGATTCTGACGAGGACGACCCTTACTCCTCAGACCACTTCCGGATGTTCGAGTTCAAGGTCCGCCGGTGCACCCGAAGCCGGAGCCACGACTGGACCGACTGCCCCTTCGCCCATCCGGGTGAAAAGGCACGCCGCCGTGACCCACGGCGGTATCACTACTCAGGAACAGTCTGTCCTGAGTATCCCCGCGGAGGGTGCAGCCGTGGCGATGCATGCGAATACGCCCATGGCGTGTTCGAATGCTGGCTGCACCCTTCCAGGTACAGAACGGAGGCCTGTAAGGATGGCAGGAACTGCAAGAGAAAGGTGTGTTTTTTCGCACACACCCCTCGCCAGCTGAGAATTTTGCCGGTAACAACATCTTCACCCTCTTCAAATGACATGCCATGCAAGAAGAACCTTAACAAACTCTTAAACCATGCTTCAAAATCAAACAACAACAACAACAACAACTGTTGTTTGTTTTGCCATTGTGGTGCTTCCTCTTCAGTTTCTCCAACCTCCACACTCTTCGGCATGTCGCATTTCTCGCCACCAGTATCACCATCCTCGTCCTCTTCACCACCTCCTTCTCCATTGAAACCCCGAAGCGTGGTTTCTCCTATTTCTCCAATTTCCCGTTACAGTGCTGTGAATATGAACCCTCATCACGGGGTGGTGAGTTACAAAGACATGTTCGCTGAGTTGGTGAATTCTTTGGAGGGTTTGAGTTTCAACGAGGGTTCTCCTGTTTCTGGTGCTAAAGCACCGAACTTTCCTTGGCTTGATGTTTCTCTTGAGGAACAGCAACAACAACAAAATCCTTTCATTGTTTCTTCTTTTGGCTGCGAAGATAAACAGAACCAGTTTATTTTTTCACCACCGTCCATTCAGACACCGACAAATGGGAAGTTCTGTCGCAACAGATTCATGGGCAACGACAACAAGGTTGTCGGTGGTGCTGACGTTAATGGCCCAGATCTCGCGTGGGTGAACGAGTTGCTGATGTAA
Protein Sequence
- >Glyma.12G205700.2
MNYQTATYPLLHADPKCYAATPSPSMSPHPILDTLSLSSHFLSPQPPYITHPFVSLHINTSYTHHCVETHSLSFLLFSFSFIIWLKTHTQKVAKMSSVCAKQHKFYPSHQLLSPKKTLREIDIPPRKLLTRRAAACVGGTDVYSSEETMLQKFLPSNDSDEDDPYSSDHFRMFEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRYHYSGTVCPEYPRGGCSRGDACEYAHGVFECWLHPSRYRTEACKDGRNCKRKVCFFAHTPRQLRILPVTTSSPSSNDMPCKKNLNKLLNHASKSNNNNNNNCCLFCHCGASSSVSPTSTLFGMSHFSPPVSPSSSSSPPPSPLKPRSVVSPISPISRYSAVNMNPHHGVVSYKDMFAELVNSLEGLSFNEGSPVSGAKAPNFPWLDVSLEEQQQQQNPFIVSSFGCEDKQNQFIFSPPSIQTPTNGKFCRNRFMGNDNKVVGGADVNGPDLAWVNELLM*