Gene Details:
- Gene ID: Glyma.02G152800
- Gene Symbol: GmTIR1A
- Gene Name: TRANSPORT INHIBITOR RESPONSE 1A
- Genome: Wm82.a4.v1
- Species: Glycine max
Functional Descriptions:
- GmTIR1/GmAFB3-based auxin perception regulated by miR393 modulates soybean nodulation.
- GmTIR1A and GmTIR1C play major roles in soybean nodulation.
- The GmTIR1A, GmTIR1C and GmAFB3A genes are the direct targets of soybean miR393.
Function-related keywords:
Literature:
- GmTIR1/GmAFB3-based auxin perception regulated by miR393 modulates soybean nodulation. DOI: 10.1111/nph.14632 ; PMID: 28598036
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >Glyma.02G152800.2
CGGTACAACACAAACTCCTTATCCTTCTCTCTCTCTCTGGCAACTTCACACATCAACAACTAGTTCACAATAACACAATCTCTTCGCTCTTCCGATGGTGTCTTCTCAGATCTAACTCTCTAAGCGCTGCTGCTTTACTGCGAGGTTTCACTACTGATTCATTTGGAAAACGACAGCGTTTTGGGTAGGGTTGTACTTGTATTTCATTGAACATGCGGCCGAGAGTAGCGTACTCGTTCCCTGAGGAGGTGCTGGAGCACGTGTTCTCCTTCATTGAGTGCGACAAGGACCGCGGCTCGATCTCCCTCGTCTGCAAGTCCTGGTACGAGATCGAGCGCTGGTGTCGCCGGAGAGTCTTCGTCGGAAACTGCTACGCGGTCTCTCCGGCCACCGTCGTCAACCGCTTCCCCAAGGTTAGATCCATCGCCATCAAGGGGAAGCCGCACTTCGCCGACTTCAATTTGGTCCCCGAGGGTTGGGGCGCTTACGTGGGCCCCTGGATCAAGGCCATGGCCGCTGCCTACCCCTGGCTTCAGGAGATCAGGCTCAAGAGGATGGTCATCGCCGACGAATGCTTGGAACTCATCGCCAAATCGTTTAAGAACTTCCAAGTCTTGGTCCTCACCTCTTGCGAGGGCTTCACCACTGATGGACTTGCAGCCATTGCTGCCAATTGCAGGAATTTGAGGGAGTTGGAGTTGCGGGAGAGTGAGGTGGACGACATCTGTGGGCATTGGCTGAGCCATTTTCCTGATTCGTACACATCACTGGTTTCCCTTAACATTTCTTGCTTAGGCAATGAGGTGAATTTGTCTGCCCTAGAGCGCCTGGTTAGTAGGTGTCCCAATCTCCAGACGCTCCGCCTCAACCGTGCTGTGCCACTAGACAGGCTTGCCACTCTTCTTCGCGGTGCTCCTCAGTTGGTTGAGTTGGGCACCGGAGCTTACACGACAGAGATGCGACCGGAGGTCTTCACAAACCTTGCGGAGGCATTTTCTGGGTGCAAGCAATTGAAGGGCTTATCTGGATTTTGGGACGTGCTCCCTTCCTACCTTCCAGCTGTCTATCCTATTTGCTCCAACCTGACTTCACTGAACTTGAGTTATGCAACTATTCAAAGCCCTGATCTTATCAAGCTTGTTGGTCAATGTGAGAGTTTGCAGCGGTTATGGGTGCTGGATTACATAGAAGATGCTGGCCTTGAAGTGATTGCTGCATCCTGTAAGGATCTAAGGGAGTTGAGGGTGTTTCCGTCCGACCCGTTTGGGTTAGAACCAAATGTAGCATTGACAGAGCAGGGCCTCGTTTCGGTGTCTGAAGGCTGCACCAAGCTCCAGTCAGTTCTATATTTTTGTCGGCAAATGTCTAATGCTGCCTTAGATACAATTGCCAGGAGCAGGCCTAATATGACACGTTTTAGACTATGTATTATTGAGCCTCGAGCTCCTGACTATCTCACCCATCAACCTCTGGATGCTGGTTTTGGAGCTATTGTAGAGCATTGCAAGGATCTTCAGCGACTTTCCCTTTCTGGGCTTCTAACTGACCGTGTTTTTGAGTATATTGGGACTTATGGTAAGAAGCTTGAGATGCTTTCTGTGGCTTTTGCTGGAGATAGCGATTTGGGACTCCATCATGTGCTGTCTGGGTGTGACAACCTTAGGAAGCTGGAGATCAGGGACTGCCCCTTTGGTGACAAAGCCCTTTTGGCCAATGCTGCAAAGCTGGAGACAATGCGATCCCTTTGGATGTCCTCTTGCTTGGTGAGTTATGGAGCATGTAAATTGCTGGGTCAGAAAATGCCAAGACTTAATGTTGAAGTCATTGATGAAAGAGGACCTCCAGATTCAAGGCCGGAGAGTAGTCCTGTTGAGAAGTTATACATATACAGGACTGTTTCTGGGCCAAGATTGGACATGCCAGGCTATGTATGGAGAATGCAAGATGATTCTGCATTAAGGATTTCTTGAGTGATTGTGCTGTGGAATGAGCCGTGGAATTTATGAAGCATTTGATGTGAGAATTGTTAGTGCAGAGTCGATTGGTGCTGTGGAATAAACATTCGGAATGACTAAAATGAGACAACCAAGTTTTCCTGTCGCATGTGAAGCGTGGAATGGCTCTACTGGTGGAAAGGTTTTTGCATTTTAACAGAGCGGCTTAAGATTGCATCCGAGTCAATTTTTGGTTGCCTACGATGGCCTTAATAGGGAAATTTGCATAAGAAGTAACATTAAATATGTAACCTGGTTACAAGTGAGGAACCTGTAATGATGTCATTAATCTCCATTATTAAAATGAACTTATCTTTTTTC - >Glyma.02G152800.3
CGGTACAACACAAACTCCTTATCCTTCTCTCTCTCTCTGGCAACTTCACACATCAACAACTAGTTCACAATAACACAATCTCTTCGCTCTTCCGATGGTGTCTTCTCAGATCTAACTCTCTAAGCGCTGCTGCTTTACTGCGAGGTTTCACTACTGATTCATTTGGAAAACGACAGCGTTTTGGGTAGGGTTGTACTTGTATTTCATTGAACATGCGGCCGAGAGTAGCGTACTCGTTCCCTGAGGAGGTGCTGGAGCACGTGTTCTCCTTCATTGAGTGCGACAAGGACCGCGGCTCGATCTCCCTCGTCTGCAAGTCCTGGTACGAGATCGAGCGCTGGTGTCGCCGGAGAGTCTTCGTCGGAAACTGCTACGCGGTCTCTCCGGCCACCGTCGTCAACCGCTTCCCCAAGGTTAGATCCATCGCCATCAAGGGGAAGCCGCACTTCGCCGACTTCAATTTGGTCCCCGAGGGTTGGGGCGCTTACGTGGGCCCCTGGATCAAGGCCATGGCCGCTGCCTACCCCTGGCTTCAGGAGATCAGGCTCAAGAGGATGGTCATCGCCGACGAATGCTTGGAACTCATCGCCAAATCGTTTAAGAACTTCCAAGTCTTGGTCCTCACCTCTTGCGAGGGCTTCACCACTGATGGACTTGCAGCCATTGCTGCCAATTGCAGGAATTTGAGGGAGTTGGAGTTGCGGGAGAGTGAGGTGGACGACATCTGTGGGCATTGGCTGAGCCATTTTCCTGATTCGTACACATCACTGGTTTCCCTTAACATTTCTTGCTTAGGCAATGAGGTGAATTTGTCTGCCCTAGAGCGCCTGGTTAGTAGGTGTCCCAATCTCCAGACGCTCCGCCTCAACCGTGCTGTGCCACTAGACAGGCTTGCCACTCTTCTTCGCGGTGCTCCTCAGTTGGTTGAGTTGGGCACCGGAGCTTACACGACAGAGATGCGACCGGAGGTCTTCACAAACCTTGCGGAGGCATTTTCTGGGTGCAAGCAATTGAAGGGCTTATCTGGATTTTGGGACGTGCTCCCTTCCTACCTTCCAGCTGTCTATCCTATTTGCTCCAACCTGACTTCACTGAACTTGAGTTATGCAACTATTCAAAGCCCTGATCTTATCAAGCTTGTTGGTCAATGTGAGAGTTTGCAGCGGTTATGGGTGCTGGATTACATAGAAGATGCTGGCCTTGAAGTGATTGCTGCATCCTGTAAGGATCTAAGGGAGTTGAGGGTGTTTCCGTCCGACCCGTTTGGGTTAGAACCAAATGTAGCATTGACAGAGCAGGGCCTCGTTTCGGTGTCTGAAGGCTGCACCAAGCTCCAGTCAGTTCTATATTTTTGTCGGCAAATGTCTAATGCTGCCTTAGATACAATTGCCAGGAGCAGGCCTAATATGACACGTTTTAGACTATGTATTATTGAGCCTCGAGCTCCTGACTATCTCACCCATCAACCTCTGGATGCTGGTTTTGGAGCTATTGTAGAGCATTGCAAGGATCTTCAGCGACTTTCCCTTTCTGGGCTTCTAACTGACCGTGTTTTTGAGTATATTGGGACTTATGGTAAGAAGCTTGAGATGCTTTCTGTGGCTTTTGCTGGAGATAGCGATTTGGGACTCCATCATGTGCTGTCTGGGTGTGACAACCTTAGGAAGCTGGAGATCAGGGACTGCCCCTTTGGTGACAAAGCCCTTTTGGCCAATGCTGCAAAGCTGGAGACAATGCGATCCCTTTGGATGTCCTCTTGCTTGGTGAGTTATGGAGCATGTAAATTGCTGGGTCAGAAAATGCCAAGACTTAATGTTGAAGTCATTGATGAAAGAGGACCTCCAGATTCAAGGCCGGAGAGTAGTCCTGTTGAGAAGTTATACATATACAGGACTGTTTCTGGGCCAAGATTGGACATGCCAGGCTATGTATGGAGAATGCAAGATGATTCTGCATTAAGGATTTCTTGAGTGATTGTGCTGTGGAATGAGCCGTGGAATTTATGAAGCATTTGATGTGAGAATTGTTAGTGCAGAGTCGATTGGTGCTGTGGAATAAACATTCGGAATGACTAAAATGAGACAACCAAGTTTTCCTGTCGCATGTGAAGCGTGGAATGGCTCTACTGGTGGAAAGGTTTTTGCATTTTAACAGAGCGGCTTAAGATTGCATCCGAGTCAATTTTTGGTTGCCTACGATGGCCTTAATAGGGAAATTTGCATAAGAAGTAACATTAAATATGTAACCTGGTTACAAGTGAGGAACCTGTAATGATGTCATTAATCTCCATTATTAAAATGAACTTATCTTTTTTC
CDS Sequence
- >Glyma.02G152800.2
ATGCGGCCGAGAGTAGCGTACTCGTTCCCTGAGGAGGTGCTGGAGCACGTGTTCTCCTTCATTGAGTGCGACAAGGACCGCGGCTCGATCTCCCTCGTCTGCAAGTCCTGGTACGAGATCGAGCGCTGGTGTCGCCGGAGAGTCTTCGTCGGAAACTGCTACGCGGTCTCTCCGGCCACCGTCGTCAACCGCTTCCCCAAGGTTAGATCCATCGCCATCAAGGGGAAGCCGCACTTCGCCGACTTCAATTTGGTCCCCGAGGGTTGGGGCGCTTACGTGGGCCCCTGGATCAAGGCCATGGCCGCTGCCTACCCCTGGCTTCAGGAGATCAGGCTCAAGAGGATGGTCATCGCCGACGAATGCTTGGAACTCATCGCCAAATCGTTTAAGAACTTCCAAGTCTTGGTCCTCACCTCTTGCGAGGGCTTCACCACTGATGGACTTGCAGCCATTGCTGCCAATTGCAGGAATTTGAGGGAGTTGGAGTTGCGGGAGAGTGAGGTGGACGACATCTGTGGGCATTGGCTGAGCCATTTTCCTGATTCGTACACATCACTGGTTTCCCTTAACATTTCTTGCTTAGGCAATGAGGTGAATTTGTCTGCCCTAGAGCGCCTGGTTAGTAGGTGTCCCAATCTCCAGACGCTCCGCCTCAACCGTGCTGTGCCACTAGACAGGCTTGCCACTCTTCTTCGCGGTGCTCCTCAGTTGGTTGAGTTGGGCACCGGAGCTTACACGACAGAGATGCGACCGGAGGTCTTCACAAACCTTGCGGAGGCATTTTCTGGGTGCAAGCAATTGAAGGGCTTATCTGGATTTTGGGACGTGCTCCCTTCCTACCTTCCAGCTGTCTATCCTATTTGCTCCAACCTGACTTCACTGAACTTGAGTTATGCAACTATTCAAAGCCCTGATCTTATCAAGCTTGTTGGTCAATGTGAGAGTTTGCAGCGGTTATGGGTGCTGGATTACATAGAAGATGCTGGCCTTGAAGTGATTGCTGCATCCTGTAAGGATCTAAGGGAGTTGAGGGTGTTTCCGTCCGACCCGTTTGGGTTAGAACCAAATGTAGCATTGACAGAGCAGGGCCTCGTTTCGGTGTCTGAAGGCTGCACCAAGCTCCAGTCAGTTCTATATTTTTGTCGGCAAATGTCTAATGCTGCCTTAGATACAATTGCCAGGAGCAGGCCTAATATGACACGTTTTAGACTATGTATTATTGAGCCTCGAGCTCCTGACTATCTCACCCATCAACCTCTGGATGCTGGTTTTGGAGCTATTGTAGAGCATTGCAAGGATCTTCAGCGACTTTCCCTTTCTGGGCTTCTAACTGACCGTGTTTTTGAGTATATTGGGACTTATGGTAAGAAGCTTGAGATGCTTTCTGTGGCTTTTGCTGGAGATAGCGATTTGGGACTCCATCATGTGCTGTCTGGGTGTGACAACCTTAGGAAGCTGGAGATCAGGGACTGCCCCTTTGGTGACAAAGCCCTTTTGGCCAATGCTGCAAAGCTGGAGACAATGCGATCCCTTTGGATGTCCTCTTGCTTGGTGAGTTATGGAGCATGTAAATTGCTGGGTCAGAAAATGCCAAGACTTAATGTTGAAGTCATTGATGAAAGAGGACCTCCAGATTCAAGGCCGGAGAGTAGTCCTGTTGAGAAGTTATACATATACAGGACTGTTTCTGGGCCAAGATTGGACATGCCAGGCTATGTATGGAGAATGCAAGATGATTCTGCATTAAGGATTTCTTGA - >Glyma.02G152800.3
ATGCGGCCGAGAGTAGCGTACTCGTTCCCTGAGGAGGTGCTGGAGCACGTGTTCTCCTTCATTGAGTGCGACAAGGACCGCGGCTCGATCTCCCTCGTCTGCAAGTCCTGGTACGAGATCGAGCGCTGGTGTCGCCGGAGAGTCTTCGTCGGAAACTGCTACGCGGTCTCTCCGGCCACCGTCGTCAACCGCTTCCCCAAGGTTAGATCCATCGCCATCAAGGGGAAGCCGCACTTCGCCGACTTCAATTTGGTCCCCGAGGGTTGGGGCGCTTACGTGGGCCCCTGGATCAAGGCCATGGCCGCTGCCTACCCCTGGCTTCAGGAGATCAGGCTCAAGAGGATGGTCATCGCCGACGAATGCTTGGAACTCATCGCCAAATCGTTTAAGAACTTCCAAGTCTTGGTCCTCACCTCTTGCGAGGGCTTCACCACTGATGGACTTGCAGCCATTGCTGCCAATTGCAGGAATTTGAGGGAGTTGGAGTTGCGGGAGAGTGAGGTGGACGACATCTGTGGGCATTGGCTGAGCCATTTTCCTGATTCGTACACATCACTGGTTTCCCTTAACATTTCTTGCTTAGGCAATGAGGTGAATTTGTCTGCCCTAGAGCGCCTGGTTAGTAGGTGTCCCAATCTCCAGACGCTCCGCCTCAACCGTGCTGTGCCACTAGACAGGCTTGCCACTCTTCTTCGCGGTGCTCCTCAGTTGGTTGAGTTGGGCACCGGAGCTTACACGACAGAGATGCGACCGGAGGTCTTCACAAACCTTGCGGAGGCATTTTCTGGGTGCAAGCAATTGAAGGGCTTATCTGGATTTTGGGACGTGCTCCCTTCCTACCTTCCAGCTGTCTATCCTATTTGCTCCAACCTGACTTCACTGAACTTGAGTTATGCAACTATTCAAAGCCCTGATCTTATCAAGCTTGTTGGTCAATGTGAGAGTTTGCAGCGGTTATGGGTGCTGGATTACATAGAAGATGCTGGCCTTGAAGTGATTGCTGCATCCTGTAAGGATCTAAGGGAGTTGAGGGTGTTTCCGTCCGACCCGTTTGGGTTAGAACCAAATGTAGCATTGACAGAGCAGGGCCTCGTTTCGGTGTCTGAAGGCTGCACCAAGCTCCAGTCAGTTCTATATTTTTGTCGGCAAATGTCTAATGCTGCCTTAGATACAATTGCCAGGAGCAGGCCTAATATGACACGTTTTAGACTATGTATTATTGAGCCTCGAGCTCCTGACTATCTCACCCATCAACCTCTGGATGCTGGTTTTGGAGCTATTGTAGAGCATTGCAAGGATCTTCAGCGACTTTCCCTTTCTGGGCTTCTAACTGACCGTGTTTTTGAGTATATTGGGACTTATGGTAAGAAGCTTGAGATGCTTTCTGTGGCTTTTGCTGGAGATAGCGATTTGGGACTCCATCATGTGCTGTCTGGGTGTGACAACCTTAGGAAGCTGGAGATCAGGGACTGCCCCTTTGGTGACAAAGCCCTTTTGGCCAATGCTGCAAAGCTGGAGACAATGCGATCCCTTTGGATGTCCTCTTGCTTGGTGAGTTATGGAGCATGTAAATTGCTGGGTCAGAAAATGCCAAGACTTAATGTTGAAGTCATTGATGAAAGAGGACCTCCAGATTCAAGGCCGGAGAGTAGTCCTGTTGAGAAGTTATACATATACAGGACTGTTTCTGGGCCAAGATTGGACATGCCAGGCTATGTATGGAGAATGCAAGATGATTCTGCATTAAGGATTTCTTGA
Protein Sequence
- >Glyma.02G152800.2
MRPRVAYSFPEEVLEHVFSFIECDKDRGSISLVCKSWYEIERWCRRRVFVGNCYAVSPATVVNRFPKVRSIAIKGKPHFADFNLVPEGWGAYVGPWIKAMAAAYPWLQEIRLKRMVIADECLELIAKSFKNFQVLVLTSCEGFTTDGLAAIAANCRNLRELELRESEVDDICGHWLSHFPDSYTSLVSLNISCLGNEVNLSALERLVSRCPNLQTLRLNRAVPLDRLATLLRGAPQLVELGTGAYTTEMRPEVFTNLAEAFSGCKQLKGLSGFWDVLPSYLPAVYPICSNLTSLNLSYATIQSPDLIKLVGQCESLQRLWVLDYIEDAGLEVIAASCKDLRELRVFPSDPFGLEPNVALTEQGLVSVSEGCTKLQSVLYFCRQMSNAALDTIARSRPNMTRFRLCIIEPRAPDYLTHQPLDAGFGAIVEHCKDLQRLSLSGLLTDRVFEYIGTYGKKLEMLSVAFAGDSDLGLHHVLSGCDNLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCLVSYGACKLLGQKMPRLNVEVIDERGPPDSRPESSPVEKLYIYRTVSGPRLDMPGYVWRMQDDSALRIS* - >Glyma.02G152800.3
MRPRVAYSFPEEVLEHVFSFIECDKDRGSISLVCKSWYEIERWCRRRVFVGNCYAVSPATVVNRFPKVRSIAIKGKPHFADFNLVPEGWGAYVGPWIKAMAAAYPWLQEIRLKRMVIADECLELIAKSFKNFQVLVLTSCEGFTTDGLAAIAANCRNLRELELRESEVDDICGHWLSHFPDSYTSLVSLNISCLGNEVNLSALERLVSRCPNLQTLRLNRAVPLDRLATLLRGAPQLVELGTGAYTTEMRPEVFTNLAEAFSGCKQLKGLSGFWDVLPSYLPAVYPICSNLTSLNLSYATIQSPDLIKLVGQCESLQRLWVLDYIEDAGLEVIAASCKDLRELRVFPSDPFGLEPNVALTEQGLVSVSEGCTKLQSVLYFCRQMSNAALDTIARSRPNMTRFRLCIIEPRAPDYLTHQPLDAGFGAIVEHCKDLQRLSLSGLLTDRVFEYIGTYGKKLEMLSVAFAGDSDLGLHHVLSGCDNLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCLVSYGACKLLGQKMPRLNVEVIDERGPPDSRPESSPVEKLYIYRTVSGPRLDMPGYVWRMQDDSALRIS*