Information report for GmTIR1A
Gene Details
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Functional Descriptions
- GmTIR1/GmAFB3-based auxin perception regulated by miR393 modulates soybean nodulation.
- GmTIR1A and GmTIR1C play major roles in soybean nodulation.
- The GmTIR1A, GmTIR1C and GmAFB3A genes are the direct targets of soybean miR393.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: 100809794
- UniProt accessions: I1JFG2
- EMBL: CM000835
- AlphaFoldDB: I1JFG2
- EnsemblPlants: KRH71533 , KRH71534
- Gramene: KRH71533 , KRH71534
- GO: GO:0009734 , GO:0019005 , GO:0031146
- OMA: TDDCLEM
- InterPro: IPR001611 , IPR001810 , IPR006553 , IPR032675 , IPR036047 , IPR041101 , IPR041567
- PANTHER: PTHR16134 , PTHR16134:SF66
- SUPFAM: SSF52047 , SSF81383
- Gene3D: 1.20.1280.50 , 3.80.10.10
- OrthoDB: I1JFG2
- SMR: I1JFG2
- CDD: cd22159
Sequences
cDNA Sequence
- >Glyma.02G152800.2
CGGTACAACACAAACTCCTTATCCTTCTCTCTCTCTCTGGCAACTTCACACATCAACAACTAGTTCACAATAACACAATCTCTTCGCTCTTCCGATGGTGTCTTCTCAGATCTAACTCTCTAAGCGCTGCTGCTTTACTGCGAGGTTTCACTACTGATTCATTTGGAAAACGACAGCGTTTTGGGTAGGGTTGTACTTGTATTTCATTGAACATGCGGCCGAGAGTAGCGTACTCGTTCCCTGAGGAGGTGCTGGAGCACGTGTTCTCCTTCATTGAGTGCGACAAGGACCGCGGCTCGATCTCCCTCGTCTGCAAGTCCTGGTACGAGATCGAGCGCTGGTGTCGCCGGAGAGTCTTCGTCGGAAACTGCTACGCGGTCTCTCCGGCCACCGTCGTCAACCGCTTCCCCAAGGTTAGATCCATCGCCATCAAGGGGAAGCCGCACTTCGCCGACTTCAATTTGGTCCCCGAGGGTTGGGGCGCTTACGTGGGCCCCTGGATCAAGGCCATGGCCGCTGCCTACCCCTGGCTTCAGGAGATCAGGCTCAAGAGGATGGTCATCGCCGACGAATGCTTGGAACTCATCGCCAAATCGTTTAAGAACTTCCAAGTCTTGGTCCTCACCTCTTGCGAGGGCTTCACCACTGATGGACTTGCAGCCATTGCTGCCAATTGCAGGAATTTGAGGGAGTTGGAGTTGCGGGAGAGTGAGGTGGACGACATCTGTGGGCATTGGCTGAGCCATTTTCCTGATTCGTACACATCACTGGTTTCCCTTAACATTTCTTGCTTAGGCAATGAGGTGAATTTGTCTGCCCTAGAGCGCCTGGTTAGTAGGTGTCCCAATCTCCAGACGCTCCGCCTCAACCGTGCTGTGCCACTAGACAGGCTTGCCACTCTTCTTCGCGGTGCTCCTCAGTTGGTTGAGTTGGGCACCGGAGCTTACACGACAGAGATGCGACCGGAGGTCTTCACAAACCTTGCGGAGGCATTTTCTGGGTGCAAGCAATTGAAGGGCTTATCTGGATTTTGGGACGTGCTCCCTTCCTACCTTCCAGCTGTCTATCCTATTTGCTCCAACCTGACTTCACTGAACTTGAGTTATGCAACTATTCAAAGCCCTGATCTTATCAAGCTTGTTGGTCAATGTGAGAGTTTGCAGCGGTTATGGGTGCTGGATTACATAGAAGATGCTGGCCTTGAAGTGATTGCTGCATCCTGTAAGGATCTAAGGGAGTTGAGGGTGTTTCCGTCCGACCCGTTTGGGTTAGAACCAAATGTAGCATTGACAGAGCAGGGCCTCGTTTCGGTGTCTGAAGGCTGCACCAAGCTCCAGTCAGTTCTATATTTTTGTCGGCAAATGTCTAATGCTGCCTTAGATACAATTGCCAGGAGCAGGCCTAATATGACACGTTTTAGACTATGTATTATTGAGCCTCGAGCTCCTGACTATCTCACCCATCAACCTCTGGATGCTGGTTTTGGAGCTATTGTAGAGCATTGCAAGGATCTTCAGCGACTTTCCCTTTCTGGGCTTCTAACTGACCGTGTTTTTGAGTATATTGGGACTTATGGTAAGAAGCTTGAGATGCTTTCTGTGGCTTTTGCTGGAGATAGCGATTTGGGACTCCATCATGTGCTGTCTGGGTGTGACAACCTTAGGAAGCTGGAGATCAGGGACTGCCCCTTTGGTGACAAAGCCCTTTTGGCCAATGCTGCAAAGCTGGAGACAATGCGATCCCTTTGGATGTCCTCTTGCTTGGTGAGTTATGGAGCATGTAAATTGCTGGGTCAGAAAATGCCAAGACTTAATGTTGAAGTCATTGATGAAAGAGGACCTCCAGATTCAAGGCCGGAGAGTAGTCCTGTTGAGAAGTTATACATATACAGGACTGTTTCTGGGCCAAGATTGGACATGCCAGGCTATGTATGGAGAATGCAAGATGATTCTGCATTAAGGATTTCTTGAGTGATTGTGCTGTGGAATGAGCCGTGGAATTTATGAAGCATTTGATGTGAGAATTGTTAGTGCAGAGTCGATTGGTGCTGTGGAATAAACATTCGGAATGACTAAAATGAGACAACCAAGTTTTCCTGTCGCATGTGAAGCGTGGAATGGCTCTACTGGTGGAAAGGTTTTTGCATTTTAACAGAGCGGCTTAAGATTGCATCCGAGTCAATTTTTGGTTGCCTACGATGGCCTTAATAGGGAAATTTGCATAAGAAGTAACATTAAATATGTAACCTGGTTACAAGTGAGGAACCTGTAATGATGTCATTAATCTCCATTATTAAAATGAACTTATCTTTTTTC - >Glyma.02G152800.3
CGGTACAACACAAACTCCTTATCCTTCTCTCTCTCTCTGGCAACTTCACACATCAACAACTAGTTCACAATAACACAATCTCTTCGCTCTTCCGATGGTGTCTTCTCAGATCTAACTCTCTAAGCGCTGCTGCTTTACTGCGAGGTTTCACTACTGATTCATTTGGAAAACGACAGCGTTTTGGGTAGGGTTGTACTTGTATTTCATTGAACATGCGGCCGAGAGTAGCGTACTCGTTCCCTGAGGAGGTGCTGGAGCACGTGTTCTCCTTCATTGAGTGCGACAAGGACCGCGGCTCGATCTCCCTCGTCTGCAAGTCCTGGTACGAGATCGAGCGCTGGTGTCGCCGGAGAGTCTTCGTCGGAAACTGCTACGCGGTCTCTCCGGCCACCGTCGTCAACCGCTTCCCCAAGGTTAGATCCATCGCCATCAAGGGGAAGCCGCACTTCGCCGACTTCAATTTGGTCCCCGAGGGTTGGGGCGCTTACGTGGGCCCCTGGATCAAGGCCATGGCCGCTGCCTACCCCTGGCTTCAGGAGATCAGGCTCAAGAGGATGGTCATCGCCGACGAATGCTTGGAACTCATCGCCAAATCGTTTAAGAACTTCCAAGTCTTGGTCCTCACCTCTTGCGAGGGCTTCACCACTGATGGACTTGCAGCCATTGCTGCCAATTGCAGGAATTTGAGGGAGTTGGAGTTGCGGGAGAGTGAGGTGGACGACATCTGTGGGCATTGGCTGAGCCATTTTCCTGATTCGTACACATCACTGGTTTCCCTTAACATTTCTTGCTTAGGCAATGAGGTGAATTTGTCTGCCCTAGAGCGCCTGGTTAGTAGGTGTCCCAATCTCCAGACGCTCCGCCTCAACCGTGCTGTGCCACTAGACAGGCTTGCCACTCTTCTTCGCGGTGCTCCTCAGTTGGTTGAGTTGGGCACCGGAGCTTACACGACAGAGATGCGACCGGAGGTCTTCACAAACCTTGCGGAGGCATTTTCTGGGTGCAAGCAATTGAAGGGCTTATCTGGATTTTGGGACGTGCTCCCTTCCTACCTTCCAGCTGTCTATCCTATTTGCTCCAACCTGACTTCACTGAACTTGAGTTATGCAACTATTCAAAGCCCTGATCTTATCAAGCTTGTTGGTCAATGTGAGAGTTTGCAGCGGTTATGGGTGCTGGATTACATAGAAGATGCTGGCCTTGAAGTGATTGCTGCATCCTGTAAGGATCTAAGGGAGTTGAGGGTGTTTCCGTCCGACCCGTTTGGGTTAGAACCAAATGTAGCATTGACAGAGCAGGGCCTCGTTTCGGTGTCTGAAGGCTGCACCAAGCTCCAGTCAGTTCTATATTTTTGTCGGCAAATGTCTAATGCTGCCTTAGATACAATTGCCAGGAGCAGGCCTAATATGACACGTTTTAGACTATGTATTATTGAGCCTCGAGCTCCTGACTATCTCACCCATCAACCTCTGGATGCTGGTTTTGGAGCTATTGTAGAGCATTGCAAGGATCTTCAGCGACTTTCCCTTTCTGGGCTTCTAACTGACCGTGTTTTTGAGTATATTGGGACTTATGGTAAGAAGCTTGAGATGCTTTCTGTGGCTTTTGCTGGAGATAGCGATTTGGGACTCCATCATGTGCTGTCTGGGTGTGACAACCTTAGGAAGCTGGAGATCAGGGACTGCCCCTTTGGTGACAAAGCCCTTTTGGCCAATGCTGCAAAGCTGGAGACAATGCGATCCCTTTGGATGTCCTCTTGCTTGGTGAGTTATGGAGCATGTAAATTGCTGGGTCAGAAAATGCCAAGACTTAATGTTGAAGTCATTGATGAAAGAGGACCTCCAGATTCAAGGCCGGAGAGTAGTCCTGTTGAGAAGTTATACATATACAGGACTGTTTCTGGGCCAAGATTGGACATGCCAGGCTATGTATGGAGAATGCAAGATGATTCTGCATTAAGGATTTCTTGAGTGATTGTGCTGTGGAATGAGCCGTGGAATTTATGAAGCATTTGATGTGAGAATTGTTAGTGCAGAGTCGATTGGTGCTGTGGAATAAACATTCGGAATGACTAAAATGAGACAACCAAGTTTTCCTGTCGCATGTGAAGCGTGGAATGGCTCTACTGGTGGAAAGGTTTTTGCATTTTAACAGAGCGGCTTAAGATTGCATCCGAGTCAATTTTTGGTTGCCTACGATGGCCTTAATAGGGAAATTTGCATAAGAAGTAACATTAAATATGTAACCTGGTTACAAGTGAGGAACCTGTAATGATGTCATTAATCTCCATTATTAAAATGAACTTATCTTTTTTC
CDS Sequence
- >Glyma.02G152800.2
ATGCGGCCGAGAGTAGCGTACTCGTTCCCTGAGGAGGTGCTGGAGCACGTGTTCTCCTTCATTGAGTGCGACAAGGACCGCGGCTCGATCTCCCTCGTCTGCAAGTCCTGGTACGAGATCGAGCGCTGGTGTCGCCGGAGAGTCTTCGTCGGAAACTGCTACGCGGTCTCTCCGGCCACCGTCGTCAACCGCTTCCCCAAGGTTAGATCCATCGCCATCAAGGGGAAGCCGCACTTCGCCGACTTCAATTTGGTCCCCGAGGGTTGGGGCGCTTACGTGGGCCCCTGGATCAAGGCCATGGCCGCTGCCTACCCCTGGCTTCAGGAGATCAGGCTCAAGAGGATGGTCATCGCCGACGAATGCTTGGAACTCATCGCCAAATCGTTTAAGAACTTCCAAGTCTTGGTCCTCACCTCTTGCGAGGGCTTCACCACTGATGGACTTGCAGCCATTGCTGCCAATTGCAGGAATTTGAGGGAGTTGGAGTTGCGGGAGAGTGAGGTGGACGACATCTGTGGGCATTGGCTGAGCCATTTTCCTGATTCGTACACATCACTGGTTTCCCTTAACATTTCTTGCTTAGGCAATGAGGTGAATTTGTCTGCCCTAGAGCGCCTGGTTAGTAGGTGTCCCAATCTCCAGACGCTCCGCCTCAACCGTGCTGTGCCACTAGACAGGCTTGCCACTCTTCTTCGCGGTGCTCCTCAGTTGGTTGAGTTGGGCACCGGAGCTTACACGACAGAGATGCGACCGGAGGTCTTCACAAACCTTGCGGAGGCATTTTCTGGGTGCAAGCAATTGAAGGGCTTATCTGGATTTTGGGACGTGCTCCCTTCCTACCTTCCAGCTGTCTATCCTATTTGCTCCAACCTGACTTCACTGAACTTGAGTTATGCAACTATTCAAAGCCCTGATCTTATCAAGCTTGTTGGTCAATGTGAGAGTTTGCAGCGGTTATGGGTGCTGGATTACATAGAAGATGCTGGCCTTGAAGTGATTGCTGCATCCTGTAAGGATCTAAGGGAGTTGAGGGTGTTTCCGTCCGACCCGTTTGGGTTAGAACCAAATGTAGCATTGACAGAGCAGGGCCTCGTTTCGGTGTCTGAAGGCTGCACCAAGCTCCAGTCAGTTCTATATTTTTGTCGGCAAATGTCTAATGCTGCCTTAGATACAATTGCCAGGAGCAGGCCTAATATGACACGTTTTAGACTATGTATTATTGAGCCTCGAGCTCCTGACTATCTCACCCATCAACCTCTGGATGCTGGTTTTGGAGCTATTGTAGAGCATTGCAAGGATCTTCAGCGACTTTCCCTTTCTGGGCTTCTAACTGACCGTGTTTTTGAGTATATTGGGACTTATGGTAAGAAGCTTGAGATGCTTTCTGTGGCTTTTGCTGGAGATAGCGATTTGGGACTCCATCATGTGCTGTCTGGGTGTGACAACCTTAGGAAGCTGGAGATCAGGGACTGCCCCTTTGGTGACAAAGCCCTTTTGGCCAATGCTGCAAAGCTGGAGACAATGCGATCCCTTTGGATGTCCTCTTGCTTGGTGAGTTATGGAGCATGTAAATTGCTGGGTCAGAAAATGCCAAGACTTAATGTTGAAGTCATTGATGAAAGAGGACCTCCAGATTCAAGGCCGGAGAGTAGTCCTGTTGAGAAGTTATACATATACAGGACTGTTTCTGGGCCAAGATTGGACATGCCAGGCTATGTATGGAGAATGCAAGATGATTCTGCATTAAGGATTTCTTGA - >Glyma.02G152800.3
ATGCGGCCGAGAGTAGCGTACTCGTTCCCTGAGGAGGTGCTGGAGCACGTGTTCTCCTTCATTGAGTGCGACAAGGACCGCGGCTCGATCTCCCTCGTCTGCAAGTCCTGGTACGAGATCGAGCGCTGGTGTCGCCGGAGAGTCTTCGTCGGAAACTGCTACGCGGTCTCTCCGGCCACCGTCGTCAACCGCTTCCCCAAGGTTAGATCCATCGCCATCAAGGGGAAGCCGCACTTCGCCGACTTCAATTTGGTCCCCGAGGGTTGGGGCGCTTACGTGGGCCCCTGGATCAAGGCCATGGCCGCTGCCTACCCCTGGCTTCAGGAGATCAGGCTCAAGAGGATGGTCATCGCCGACGAATGCTTGGAACTCATCGCCAAATCGTTTAAGAACTTCCAAGTCTTGGTCCTCACCTCTTGCGAGGGCTTCACCACTGATGGACTTGCAGCCATTGCTGCCAATTGCAGGAATTTGAGGGAGTTGGAGTTGCGGGAGAGTGAGGTGGACGACATCTGTGGGCATTGGCTGAGCCATTTTCCTGATTCGTACACATCACTGGTTTCCCTTAACATTTCTTGCTTAGGCAATGAGGTGAATTTGTCTGCCCTAGAGCGCCTGGTTAGTAGGTGTCCCAATCTCCAGACGCTCCGCCTCAACCGTGCTGTGCCACTAGACAGGCTTGCCACTCTTCTTCGCGGTGCTCCTCAGTTGGTTGAGTTGGGCACCGGAGCTTACACGACAGAGATGCGACCGGAGGTCTTCACAAACCTTGCGGAGGCATTTTCTGGGTGCAAGCAATTGAAGGGCTTATCTGGATTTTGGGACGTGCTCCCTTCCTACCTTCCAGCTGTCTATCCTATTTGCTCCAACCTGACTTCACTGAACTTGAGTTATGCAACTATTCAAAGCCCTGATCTTATCAAGCTTGTTGGTCAATGTGAGAGTTTGCAGCGGTTATGGGTGCTGGATTACATAGAAGATGCTGGCCTTGAAGTGATTGCTGCATCCTGTAAGGATCTAAGGGAGTTGAGGGTGTTTCCGTCCGACCCGTTTGGGTTAGAACCAAATGTAGCATTGACAGAGCAGGGCCTCGTTTCGGTGTCTGAAGGCTGCACCAAGCTCCAGTCAGTTCTATATTTTTGTCGGCAAATGTCTAATGCTGCCTTAGATACAATTGCCAGGAGCAGGCCTAATATGACACGTTTTAGACTATGTATTATTGAGCCTCGAGCTCCTGACTATCTCACCCATCAACCTCTGGATGCTGGTTTTGGAGCTATTGTAGAGCATTGCAAGGATCTTCAGCGACTTTCCCTTTCTGGGCTTCTAACTGACCGTGTTTTTGAGTATATTGGGACTTATGGTAAGAAGCTTGAGATGCTTTCTGTGGCTTTTGCTGGAGATAGCGATTTGGGACTCCATCATGTGCTGTCTGGGTGTGACAACCTTAGGAAGCTGGAGATCAGGGACTGCCCCTTTGGTGACAAAGCCCTTTTGGCCAATGCTGCAAAGCTGGAGACAATGCGATCCCTTTGGATGTCCTCTTGCTTGGTGAGTTATGGAGCATGTAAATTGCTGGGTCAGAAAATGCCAAGACTTAATGTTGAAGTCATTGATGAAAGAGGACCTCCAGATTCAAGGCCGGAGAGTAGTCCTGTTGAGAAGTTATACATATACAGGACTGTTTCTGGGCCAAGATTGGACATGCCAGGCTATGTATGGAGAATGCAAGATGATTCTGCATTAAGGATTTCTTGA
Protein Sequence
- >Glyma.02G152800.2
MRPRVAYSFPEEVLEHVFSFIECDKDRGSISLVCKSWYEIERWCRRRVFVGNCYAVSPATVVNRFPKVRSIAIKGKPHFADFNLVPEGWGAYVGPWIKAMAAAYPWLQEIRLKRMVIADECLELIAKSFKNFQVLVLTSCEGFTTDGLAAIAANCRNLRELELRESEVDDICGHWLSHFPDSYTSLVSLNISCLGNEVNLSALERLVSRCPNLQTLRLNRAVPLDRLATLLRGAPQLVELGTGAYTTEMRPEVFTNLAEAFSGCKQLKGLSGFWDVLPSYLPAVYPICSNLTSLNLSYATIQSPDLIKLVGQCESLQRLWVLDYIEDAGLEVIAASCKDLRELRVFPSDPFGLEPNVALTEQGLVSVSEGCTKLQSVLYFCRQMSNAALDTIARSRPNMTRFRLCIIEPRAPDYLTHQPLDAGFGAIVEHCKDLQRLSLSGLLTDRVFEYIGTYGKKLEMLSVAFAGDSDLGLHHVLSGCDNLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCLVSYGACKLLGQKMPRLNVEVIDERGPPDSRPESSPVEKLYIYRTVSGPRLDMPGYVWRMQDDSALRIS* - >Glyma.02G152800.3
MRPRVAYSFPEEVLEHVFSFIECDKDRGSISLVCKSWYEIERWCRRRVFVGNCYAVSPATVVNRFPKVRSIAIKGKPHFADFNLVPEGWGAYVGPWIKAMAAAYPWLQEIRLKRMVIADECLELIAKSFKNFQVLVLTSCEGFTTDGLAAIAANCRNLRELELRESEVDDICGHWLSHFPDSYTSLVSLNISCLGNEVNLSALERLVSRCPNLQTLRLNRAVPLDRLATLLRGAPQLVELGTGAYTTEMRPEVFTNLAEAFSGCKQLKGLSGFWDVLPSYLPAVYPICSNLTSLNLSYATIQSPDLIKLVGQCESLQRLWVLDYIEDAGLEVIAASCKDLRELRVFPSDPFGLEPNVALTEQGLVSVSEGCTKLQSVLYFCRQMSNAALDTIARSRPNMTRFRLCIIEPRAPDYLTHQPLDAGFGAIVEHCKDLQRLSLSGLLTDRVFEYIGTYGKKLEMLSVAFAGDSDLGLHHVLSGCDNLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCLVSYGACKLLGQKMPRLNVEVIDERGPPDSRPESSPVEKLYIYRTVSGPRLDMPGYVWRMQDDSALRIS*