Information report for GmSWN
Gene Details
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Functional Descriptions
- Suggests that floral promotion by GmSWN via downregulation of GmFLC-like may be conserved in soybean.
- GmSWN photoperiodic flowering time regulation.
- Latitudinal distribution of GmSWN alleles among 187 resequenced ELs with the maturity genotype e1-as/E2. Latitude of origination was used a proxy for relative flowering time.
- GmSWN on chromosome 03 (Glyma.03G224300) was identified as a putative ortholog of the Arabidopsis SWN gene.
Functional Keywords
Literature and News
- Candidate Genes Modulating Reproductive Timing in Elite US Soybean Lines Identified in Soybean Alleles of Arabidopsis Flowering Orthologs With Divergent Latitude Distribution. DOI: 10.3389/fpls.2022.889066 ; PMID: 35574141
- Transcriptome-Enabled Network Inference Revealed the GmCOL1 Feed-Forward Loop and Its Roles in Photoperiodic Flowering of Soybean. DOI: 10.3389/fpls.2019.01221 ; PMID: 31787988
Gene Resources
- NCBI ID: 106798111
- UniProt accessions: K7KGG9
- EMBL: CM000836
- AlphaFoldDB: K7KGG9
- EnsemblPlants: KRH68336
- Gramene: KRH68336
- GO: GO:0003682 , GO:0005634 , GO:0031507 , GO:0031519 , GO:0032259 , GO:0046976 , GO:0140951
- InterPro: IPR001214 , IPR009057 , IPR025778 , IPR026489 , IPR033467 , IPR041355 , IPR045318 , IPR046341
- PANTHER: PTHR45747 , PTHR45747:SF14
- SUPFAM: SSF46689 , SSF82199
- PROSITE: PS50280 , PS51576 , PS51633
- Gene3D: 2.170.270.10
- OrthoDB: K7KGG9
- CDD: cd10519
Sequences
cDNA Sequence
- >Glyma.03G224300.1
ACGCATTGTTGGTCATATGACAACTTAGTTCTAAAGAACAGTATTCTTGTTTTCTTAGTCGTGTTCTTTTTCTTTATCATTTCTACCATTTAATCTTCTCGTCTTGTTCTCCTTTGAACAATCGTTGGGTACATCCATGGTGAACAAAACTAGTAACTCTACCTCCAAACACCAAAAACAACATGGAGAAGCAGAAAAAGATACTGTTGGAAGAACCTTGAAGATCAAGATTAAACAGTTGACAGATCAAGTCAATGTCAAGAGAGGAAAATCGGTTAAAGAAAAAGTTGAAAGACATTGGAATAATCTCAAGTCTTTGTTTTCAATGGTCGAGTTAGAAATATCAAGGAGGGAGTCTTTGCAGACTAAGGAAAAAGTCAATATGCTTTCTTCAAGAATTGGCAAGCCTTTATCTAAGTTTAATGGTTTTCCTAAAGATATGATAGAGAAGGACCGCATCAACAATGCGGACTTATCATTGACAAAAACCATTAGGATTCCAAAAAAGGAAAAAATACCACCATATACATCTTGGGTATATGTGGTCAGAAATGAAAGAATGGCCAAAGATCAAACAGTTCTTGGAAAATACCAAATGTATTATGATAAAAATAGAGGTGAAATGATGATATGTAGTGATAGTGAAGAAGAGATGGTAAATCCCAAGGATGTTAAACACGACTTCACCGAGGCTGAAGACCAAATTCTATGGACCACACTTGCGGAATATGGATCTACTGAGGAGATATTTAGTATTGTTAAAGAGATTGTTAAGACAACTGATTCACAAATTCAGGAGAGGTATGAAATACTCAACAAAAAAAATATGAGGAGTCCAAGTCAGAATTTTGAAGATTGTCATTGTAGAGGATGTCAAAATCATCTTGGGATATGTTTGGAAGAAAACTTGAATGTTATTTTAGAACCTTTTGATAATTTTTTTTGTCGCCGATGTTTGATCTTTGATTGTTCTGTGCATGGCATTTATCAACCTTTAATATATCATAGTGAAAAACAATCAATTTGGTCTGAACTTGAAGGTGACAAGAAACCATGCAGCAAGCAGTGTTACATTATGTTAAAAGATGTTAATATTTTGTCAAAAAATACATCTCAAAGGTATTTTCGAGATAAAATAATTACACCAATGGAAGAGGACCCTACATTACCTCATGACGAGCCTCAAGATTCTTCTAAAAGGTTGAGAACCCCAAATGATATAATCACTGAAATTGACCTTCGTTACATGGAACTCAATTTGGATGCTAATGATGAAGAAAACCACACAACATATGGTGCATCTTTGAAAAGTCTTAACGAACATTCTTCAGGGAAATCAACAGTTTTTTATAACTATAGCCACGATGAGCAAGGCAAAGGAGTTATGGATGGAGAAAAAGATCTCACAAATGAGATAGAATTTAACCAATTGTCCATTTCAAGGGAAGTGCAAGCTTATGAGATGACAAATGAGTCAAATTGGAGACCTCTAGAGAGAGATTTGTATTTGAAGGGGGTAGAAATGTTTGGAAAAAATAGTTGCCTTATAGCCTTTAACTTACTTCATGGTTTGAAGACTTGCATAGAAGTAACTAAATACATGTCTGCTTGTGACGAGACAATAACCCATGGATCCATACCAAGTTCAACCGTGGACAAAAAGGAAAAGATCAATGCAGAGTTCACAGACCAAGAAATGGCTTCAAGATCACGGTCGCAACGAAAAAAGGGCAAACCAAGAAAGTTTAATTATTCTCGAAAATCTGCTGGCCTTCCACCTAGATGGAGAAAAATTGCTTATGGGCAAAATCAATATAATAAGCAATATACTCCTTGTGGGTGTCAGGGAATGTGTGGAAAGGAATGTCCTTGTCTTCTTCATGGAACTTGCTGTGAAAAATATTGTGGGTGTTCAAAGCTTTGCAACAACCGATTTAGAGGATGTCGTTGTGCTAAGAGTCAATGCAGAAGCCGACAATGCCCATGTTTTGCAGCCAACCGCGAATGTGACCCAGATGTTTGTCGAAATTGTTGGGTTAGTTGTGGCGATGGTTCATTAGGGGAGCCACCTCGATGTGGAGATGGAAAATGTGGAAATATGAATCTTCTTCTAGGGCTAAAAGAGAGGATTCTTTTGGCAAAGTCAGATGTTATAGGATGGGGAACTTTCGCAAAGAACCCGATTAACAAGAATGTGTGCCTAGGAGAATACACGGGTGAACTGATCACTCCTAAAGAAGCAGAAAAACGTGGAAAATTATATGATCGCATAAACACTTCATTCCTTTTCAACCTTAATGATCGGTGGGTTATTGATTCTTGTCGCTTGGGAGACAAGTTAAAATTTGCAAACCATTCATCAAAACCCAACTGCTATGCAAAGGTGATGCTTGTTGGAGGAGAACATCGAGTTGGCATATTTTCCAAGGAAAACATTGAAGCAGGTGAAGAGATTTTCTATGATTATTGGTATGATCTAGATTGTGCTCCACAATGGGCTCTTCCACCTGATGAGGTTTCTAAGAAAGATGAATCGATTGTTTCTCAAGGCAGGGCAAAGAAAAACCAATCTCATTGTTGAGTCTTAGCTAAGGAACTAAGGTTTATGATTGATGGTATCTTTTCTCAAAAAATGAAAATTTGACATCCTATGGAGAATAGCCAAAAGCATATGCCATAAGAATGCATTTAGCCTAAAAATTGTGAACCAAAGTATGAGTTTGTTGTCGTTGTTGTAATCATGTTTATTTTTCTATTTACTTAATGCTAATTTTGGCAATTTTCATTAATGTCATTAATCAAATTGTAAGAAATGTACAAAAAAATCATGTTGAAAGAAGAAATGTGTAATTTCAATCTCCTAATGTGAAACATTATAACTTTTTTTTA
CDS Sequence
- >Glyma.03G224300.1
ATGGTGAACAAAACTAGTAACTCTACCTCCAAACACCAAAAACAACATGGAGAAGCAGAAAAAGATACTGTTGGAAGAACCTTGAAGATCAAGATTAAACAGTTGACAGATCAAGTCAATGTCAAGAGAGGAAAATCGGTTAAAGAAAAAGTTGAAAGACATTGGAATAATCTCAAGTCTTTGTTTTCAATGGTCGAGTTAGAAATATCAAGGAGGGAGTCTTTGCAGACTAAGGAAAAAGTCAATATGCTTTCTTCAAGAATTGGCAAGCCTTTATCTAAGTTTAATGGTTTTCCTAAAGATATGATAGAGAAGGACCGCATCAACAATGCGGACTTATCATTGACAAAAACCATTAGGATTCCAAAAAAGGAAAAAATACCACCATATACATCTTGGGTATATGTGGTCAGAAATGAAAGAATGGCCAAAGATCAAACAGTTCTTGGAAAATACCAAATGTATTATGATAAAAATAGAGGTGAAATGATGATATGTAGTGATAGTGAAGAAGAGATGGTAAATCCCAAGGATGTTAAACACGACTTCACCGAGGCTGAAGACCAAATTCTATGGACCACACTTGCGGAATATGGATCTACTGAGGAGATATTTAGTATTGTTAAAGAGATTGTTAAGACAACTGATTCACAAATTCAGGAGAGGTATGAAATACTCAACAAAAAAAATATGAGGAGTCCAAGTCAGAATTTTGAAGATTGTCATTGTAGAGGATGTCAAAATCATCTTGGGATATGTTTGGAAGAAAACTTGAATGTTATTTTAGAACCTTTTGATAATTTTTTTTGTCGCCGATGTTTGATCTTTGATTGTTCTGTGCATGGCATTTATCAACCTTTAATATATCATAGTGAAAAACAATCAATTTGGTCTGAACTTGAAGGTGACAAGAAACCATGCAGCAAGCAGTGTTACATTATGTTAAAAGATGTTAATATTTTGTCAAAAAATACATCTCAAAGGTATTTTCGAGATAAAATAATTACACCAATGGAAGAGGACCCTACATTACCTCATGACGAGCCTCAAGATTCTTCTAAAAGGTTGAGAACCCCAAATGATATAATCACTGAAATTGACCTTCGTTACATGGAACTCAATTTGGATGCTAATGATGAAGAAAACCACACAACATATGGTGCATCTTTGAAAAGTCTTAACGAACATTCTTCAGGGAAATCAACAGTTTTTTATAACTATAGCCACGATGAGCAAGGCAAAGGAGTTATGGATGGAGAAAAAGATCTCACAAATGAGATAGAATTTAACCAATTGTCCATTTCAAGGGAAGTGCAAGCTTATGAGATGACAAATGAGTCAAATTGGAGACCTCTAGAGAGAGATTTGTATTTGAAGGGGGTAGAAATGTTTGGAAAAAATAGTTGCCTTATAGCCTTTAACTTACTTCATGGTTTGAAGACTTGCATAGAAGTAACTAAATACATGTCTGCTTGTGACGAGACAATAACCCATGGATCCATACCAAGTTCAACCGTGGACAAAAAGGAAAAGATCAATGCAGAGTTCACAGACCAAGAAATGGCTTCAAGATCACGGTCGCAACGAAAAAAGGGCAAACCAAGAAAGTTTAATTATTCTCGAAAATCTGCTGGCCTTCCACCTAGATGGAGAAAAATTGCTTATGGGCAAAATCAATATAATAAGCAATATACTCCTTGTGGGTGTCAGGGAATGTGTGGAAAGGAATGTCCTTGTCTTCTTCATGGAACTTGCTGTGAAAAATATTGTGGGTGTTCAAAGCTTTGCAACAACCGATTTAGAGGATGTCGTTGTGCTAAGAGTCAATGCAGAAGCCGACAATGCCCATGTTTTGCAGCCAACCGCGAATGTGACCCAGATGTTTGTCGAAATTGTTGGGTTAGTTGTGGCGATGGTTCATTAGGGGAGCCACCTCGATGTGGAGATGGAAAATGTGGAAATATGAATCTTCTTCTAGGGCTAAAAGAGAGGATTCTTTTGGCAAAGTCAGATGTTATAGGATGGGGAACTTTCGCAAAGAACCCGATTAACAAGAATGTGTGCCTAGGAGAATACACGGGTGAACTGATCACTCCTAAAGAAGCAGAAAAACGTGGAAAATTATATGATCGCATAAACACTTCATTCCTTTTCAACCTTAATGATCGGTGGGTTATTGATTCTTGTCGCTTGGGAGACAAGTTAAAATTTGCAAACCATTCATCAAAACCCAACTGCTATGCAAAGGTGATGCTTGTTGGAGGAGAACATCGAGTTGGCATATTTTCCAAGGAAAACATTGAAGCAGGTGAAGAGATTTTCTATGATTATTGGTATGATCTAGATTGTGCTCCACAATGGGCTCTTCCACCTGATGAGGTTTCTAAGAAAGATGAATCGATTGTTTCTCAAGGCAGGGCAAAGAAAAACCAATCTCATTGTTGA
Protein Sequence
- >Glyma.03G224300.1
MVNKTSNSTSKHQKQHGEAEKDTVGRTLKIKIKQLTDQVNVKRGKSVKEKVERHWNNLKSLFSMVELEISRRESLQTKEKVNMLSSRIGKPLSKFNGFPKDMIEKDRINNADLSLTKTIRIPKKEKIPPYTSWVYVVRNERMAKDQTVLGKYQMYYDKNRGEMMICSDSEEEMVNPKDVKHDFTEAEDQILWTTLAEYGSTEEIFSIVKEIVKTTDSQIQERYEILNKKNMRSPSQNFEDCHCRGCQNHLGICLEENLNVILEPFDNFFCRRCLIFDCSVHGIYQPLIYHSEKQSIWSELEGDKKPCSKQCYIMLKDVNILSKNTSQRYFRDKIITPMEEDPTLPHDEPQDSSKRLRTPNDIITEIDLRYMELNLDANDEENHTTYGASLKSLNEHSSGKSTVFYNYSHDEQGKGVMDGEKDLTNEIEFNQLSISREVQAYEMTNESNWRPLERDLYLKGVEMFGKNSCLIAFNLLHGLKTCIEVTKYMSACDETITHGSIPSSTVDKKEKINAEFTDQEMASRSRSQRKKGKPRKFNYSRKSAGLPPRWRKIAYGQNQYNKQYTPCGCQGMCGKECPCLLHGTCCEKYCGCSKLCNNRFRGCRCAKSQCRSRQCPCFAANRECDPDVCRNCWVSCGDGSLGEPPRCGDGKCGNMNLLLGLKERILLAKSDVIGWGTFAKNPINKNVCLGEYTGELITPKEAEKRGKLYDRINTSFLFNLNDRWVIDSCRLGDKLKFANHSSKPNCYAKVMLVGGEHRVGIFSKENIEAGEEIFYDYWYDLDCAPQWALPPDEVSKKDESIVSQGRAKKNQSHC*