Gene Details:

  • Gene ID: Glyma.13g292300
  • Gene Symbol: GmRIC1GmCLE1
  • Gene Name: Rhizobia-Induced CLE1
  • Genome: Wm82.a4.v1
  • Species: Glycine max

Functional Descriptions:

  • Here, we report that microRNA172c (miR172c) activates soybean (Glycine max) Rhizobia-Induced CLE1 (GmRIC1) and GmRIC2 by removing the transcriptional repression of these genes by Nodule Number Control 1 (NNC1), leading to the activation of the AON pathway.
  • These results suggest that both GmRIC1 and GmRIC2 act downstream of NNC1 and that the miR172c/NNC1 module regulates nodule number in soybean via GmRIC1 and GmRIC2.
  • NNC1 knockdown resulted in dramatically higher expression levels of GmRIC1 and GmRIC2 at 5 DAI, suggesting an NNC1 inhibits the expression of both genes during nodulation.
  • Given this result, we speculated that GmNINa and NNC1 antagonistically regulate GmRIC1 and GmRIC2 expression by competing for cis-element binding during nodulation.
  • The soybean (Glycine max) nodulation-suppressive CLE peptide, GmRIC1, functions interspecifically in common white bean (Phaseolus vulgaris), but not in a supernodulating line mutated in the receptor PvNARK.
  • Homeologous over-expression of the nodulation-suppressive CLE peptide-encoding soybean gene, GmRIC1, abolished nodulation in wild-type bean, but had no discernible effect on PvNARK-mutant plants. This demonstrates that soybean GmRIC1 can function interspecifically in bean, acting in a PvNARK-dependent manner.
  • The GmRIC1 and GmRIC2 genes initiated expression solely in the roots at approximately 3 days after inoculation (DAI) with Nod factor-producing rhizobia, corresponding to the time point of AON, and the expression was up-regulated by cytokinins.
  • The results of this study suggest that GmRIC1 and GmRIC2 are good candidates for root-derived signal Q in AON signal transduction.

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • >Glyma.13G292300.1
    CATCCAACCTCAAGTAGACCTTGTTCAATATTGATTCAGACTTTACATTTCACCGCATGGCAAATGCAACAATGGCTACTCGAGTGTCTATACTAATTGCACTAATCATCCTCTCCACCTTCTTCATGACTTTGCAGGCTAGTAATCTCCATGGCCATCCCTTCATTCGTGAAAATAATATTGCAGATAGCCATCACTTTCTTCACAAATATTTAGACGACCTATCAAAGCATATACATGTTCAAGATGCTGATGATGCCCCTCACAAAGATGGAAATACGCATAGGCTCGCACCAGAGGGACCAGATCCTCATCATAATTTTGCAACACCACCAAGAAACTAAAGTAGCTTTGTTTGGAGTAGATTTCGATTGTGCATGCCTCATATAGTTGTGTGAGTTAATTATGAGATCGATGCACGGTTTATTTTTAGTACCTTTTCTTCCCTTATTTAAACTTCGTGGTATTTTCAAATAAACCTACTTGTTGCTTTCGAAACCCAGTGTTCTAGAGCATATATATGTAGGTGAAGTACGCATCATTTTTGTTTGTTATTTGTCGGCAGTAGTAGTTGTATGGTATCTCTGTTTCTCTCTTTTCTACGTTCTTTTTCCTCCTTTTCTGCTGTATTTTTGCCCTTTCTACTGTTAGAGGAAGTACAAGTTCAGTGAGGAGGCTAAGTGTCAGGATTTGTCATGTATGGCAATAATATATATGTCACTTTTCTTACTCATATATGGAATCTGCTTATTTTATTTTTAATAGTAAAGTTTTTAATATGTT
CDS Sequence
  • >Glyma.13G292300.1
    ATGGCAAATGCAACAATGGCTACTCGAGTGTCTATACTAATTGCACTAATCATCCTCTCCACCTTCTTCATGACTTTGCAGGCTAGTAATCTCCATGGCCATCCCTTCATTCGTGAAAATAATATTGCAGATAGCCATCACTTTCTTCACAAATATTTAGACGACCTATCAAAGCATATACATGTTCAAGATGCTGATGATGCCCCTCACAAAGATGGAAATACGCATAGGCTCGCACCAGAGGGACCAGATCCTCATCATAATTTTGCAACACCACCAAGAAACTAA
Protein Sequence
  • >Glyma.13G292300.1
    MANATMATRVSILIALIILSTFFMTLQASNLHGHPFIRENNIADSHHFLHKYLDDLSKHIHVQDADDAPHKDGNTHRLAPEGPDPHHNFATPPRN*