Information report for GmRAV
Gene Details
|
|
Functional Descriptions
- We identified six polymorphisms in the GmRAV promoter that showed significant association with flowering time and maturity of soybean in one or multiple environments.
- GmRAV acting downstream of E3/E4 delayed soybean growth period by repressing GmFT5a transcriptional activity.
- GT1CONSENSUS motif regulated the levels of GmRAV expression by photoperiod response.
- GmRAV confers ecological adaptation through photoperiod control of flowering time and maturity in soybean.
- GmRAV inhibited the expression of the GmFT5a by binding to a CAACA motif in GmFT5a promoter thereby delaying flowering in soybean.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: 732601
- UniProt accessions: Q45EZ4
- EMBL: CM000843 , DQ147914
- EnsemblPlants: KRH34761
- Gramene: KRH34761
- KEGG: gmx:732601
- GO: GO:0003677 , GO:0003700 , GO:0005634
- OMA: KYNAGFG
- InterPro: IPR001471 , IPR003340 , IPR015300 , IPR016177 , IPR036955 , IPR044800
- PANTHER: PTHR31140 , PTHR31140:SF67
- SUPFAM: SSF101936 , SSF54171
- PROSITE: PS50863 , PS51032
- Gene3D: 2.40.330.10 , 3.30.730.10
- OrthoDB: Q45EZ4
- SMR: Q45EZ4
- CDD: cd00018 , cd10017
Sequences
cDNA Sequence
- >Glyma.10G204400.1
AAACCAAACCATACCTATTCTCAAGTTTCTCTCTGTTTCTTCCTACTTCATGCTATAGCACTTACAATACTCAACAATAACCTAACCAAACCAAACCAAACCAAAACCCTTATCTGCACTCACTTCACACAAACCAAAGTTAATTAATTACCAACACAAAATGGATGGAGGCTGTGTCACAGACGAAACCACCACATCCAGCGACTCTCTTTCCGTTCCGCCGCCCAGCCGCGTCGGCAGCGTTGCAAGCGCCGTCGTCGACCCCGACGGTTGTTGCGTTTCCGGCGAGGCCGAATCCCGGAAACTCCCTTCGTCGAAATACAAAGGCGTGGTGCCGCAACCGAACGGTCGCTGGGGAGCTCAGATTTACGAGAAGCACCAGCGCGTGTGGCTCGGCACTTTCAACGAGGAAGACGAAGCCGCCAGAGCCTACGACATCGCCGCGCTGCGCTTCCGCGGCCCCGACGCCGTCACCAACTTCAAGCCTCCCGCCGCCTCCGACGACGCCGAGTCCGAGTTCCTCAACTCGCATTCCAAGTTCGAGATCGTCGACATGCTCCGCAAGCACACCTACGACGACGAGCTCCAGCAGAGCACGCGCGGTGGTAGGCGCCGCCTCGACGCTGACACCGCGTCGAGCGGTGTGTTCGACGCGAAAGCGCGTGAGCAGCTGTTCGAGAAAACGGTTACGCCGAGCGACGTCGGGAAGCTGAATCGATTAGTGATACCGAAGCAGCACGCGGAGAAGCACTTTCCGTTAAGCGGATCCGGCGACGAAAGCTCGCCGTGCGTGGCGGGGGCTTCGGCGGCGAAGGGAATGTTGTTGAACTTTGAGGACGTTGGAGGGAAAGTGTGGCGGTTTCGTTACTCTTATTGGAACAGTAGCCAGAGCTACGTGCTTACCAAAGGATGGAGCCGGTTCGTTAAGGAGAAGAATCTTCGAGCCGGTGACGCGGTTCAGTTCTTCAAGTCGACCGGACCGGACCGGCAGCTATATATAGACTGCAAGGCGAGGAGTGGTGAGGTTAACAATAATGCTGGCGGTTTGTTTGTTCCGATTGGACCGGTCGTTGAGCCGGTTCAGATGGTTCGGCTTTTCGGGGTCAACCTTTTGAAACTACCCGTACCCGGTTCGGATGGTGTAGGGAAGAGAAAAGAGATGGAACTGTTTGCATTTGAATGTTGCAAGAAGTTAAAAGTAATTGGAGCTTTGTAACATTACATAGTTTTTGAGTTTCTTTTGTGAATTTTGTAACTGTTGAATTCATGAGGTAGAGATGGTGATGGTGTTGTTGCAAGTTGCCACTCACAAAAGGTGTATAGTCTCAGACAAAAAGAAAAAGGAAAAATTAGGGCAAGAAAAATTGTTGAACAGAAATTTTCTTAACAAAAAAAAAAAAGGAACGAGCTAGGAATACGACTGTTTATTTTGTTATTCTTTTTTCTTATTATAAATGTTTTCTATGAGAAGTAATTTTTTTAGACACAGGACATTAACTCTGAACAGCTATCTCCGACAAAAAAACAAAAATGAATTGAAATTTATCGCCTTATAATAAATCAATTCCTTGTATGAGATTTACTTTTAAGTTTGTTTTGTAACTTTGTTCATGTATATCACATGTGCGGTGCTTTCCATTTTCATGATTTCAGCTTGCATTATCATATGGATATGACCAACCCATATAAAGATATTATAGTTTAACTAATAGTAGTAATACTGAGTTATGTTAAATATAATTTTTTGTAAAGCATGATTACTTTATATACAGAATATATGTGATTTTGCGAAAAAATTATTTTAGGTTGCTTAATTTTAATATTTCTTTAGTGTATAATCATGATTTTTTGAAATAATTTGTTTTTTCTAAAATAAATCTTAAAAAGTATAATAAAAAATAATTATTTTCTTAAAGTTAACTGAATTAAATATACACTTCTTTTTTGTGGTGTAAGAGCATGACTCTTGAAATATATCGTTTTGGATGACAAATTATAGCGTTTTTTTCTCTCTATCTTAATCGTTTACTTTTCTACATTTATTAGCTTTATTTATCTTATAATTTATTTTTTTCTAAAAAAAATCTTATTATTTATATTTTCTACACTTGTAGTTTTTTTCTTCGTAGTACTTTTGCTGATAGTAAAGTTAATACATGTATATATTTGGGGGGTCCATTGCATGGCCTATGAAAGTGTGAACAAGTTGATAATTAGACATTTGTGCAATTAAGAAAGAAACTAAGAACGAGCTACTTGGCAAGTGGGTATGGCGTACAGTTCATGCCCATAGTTTTTTCTAACATTCTTAAAATTATTATAGACCTTACTACCGGTACCTTGTTTTTCGAATGGTCAACTTTCCACGAAGCTACCATTGTTTGCATCGTTCTCTACCACCAAAGAATTCTCAATTCGTTCCCTGAAAAAGAGGGAGGAAATATGCAACTAGGATTTTGTTCATGATCAAAACATGTTGAAGCTACATAGGTTCATTCCTTGTTCTATATACATCAACTTACACCAGCTTGTATATATTTGTTTTTGAAAGCTGATATTATGACATATGTAGTGGGTTTGCGGGTAGAGTTGAGTCGATTTTGAGCATTTAAAATTTTTTTTCTTAGATATATAATCGGTTTTATAAAATTAAATTCCATATAATTTGTTTTGGTTTGAATTTAATTGATTTTTCAAAAGAGTATGTAAATATTAAAATAAATCATAAAATATATAAATTAATTCAATATCGAATATTATATTTCATATATAACTTATAATGTAATTCAAAATACAAATTTAAATTAGATATAATATCGCAATATAATTATGCATAAATTAGTAAATACATTTTAGAATTAGTCTATTCTTTCTTTTCTAATATCTGGGTCACATTCACGCTCATCTTTTAAAAAAAGAAAAGTAAGGAGAGAAGACTTGTTTTAAAATTTAAATTAAAGAAACATTATATTTCATATATAACTTATAATATTTCAAAATACAAATTCAAGTTGCAAGTTGTACACACTATCGCAATATAACATAAACCAATATAATTTAGAATTAGTCTATTCTTCATCAGTAATATCTTAGTCACATTCAAGCTCGTCCT
CDS Sequence
- >Glyma.10G204400.1
ATGGATGGAGGCTGTGTCACAGACGAAACCACCACATCCAGCGACTCTCTTTCCGTTCCGCCGCCCAGCCGCGTCGGCAGCGTTGCAAGCGCCGTCGTCGACCCCGACGGTTGTTGCGTTTCCGGCGAGGCCGAATCCCGGAAACTCCCTTCGTCGAAATACAAAGGCGTGGTGCCGCAACCGAACGGTCGCTGGGGAGCTCAGATTTACGAGAAGCACCAGCGCGTGTGGCTCGGCACTTTCAACGAGGAAGACGAAGCCGCCAGAGCCTACGACATCGCCGCGCTGCGCTTCCGCGGCCCCGACGCCGTCACCAACTTCAAGCCTCCCGCCGCCTCCGACGACGCCGAGTCCGAGTTCCTCAACTCGCATTCCAAGTTCGAGATCGTCGACATGCTCCGCAAGCACACCTACGACGACGAGCTCCAGCAGAGCACGCGCGGTGGTAGGCGCCGCCTCGACGCTGACACCGCGTCGAGCGGTGTGTTCGACGCGAAAGCGCGTGAGCAGCTGTTCGAGAAAACGGTTACGCCGAGCGACGTCGGGAAGCTGAATCGATTAGTGATACCGAAGCAGCACGCGGAGAAGCACTTTCCGTTAAGCGGATCCGGCGACGAAAGCTCGCCGTGCGTGGCGGGGGCTTCGGCGGCGAAGGGAATGTTGTTGAACTTTGAGGACGTTGGAGGGAAAGTGTGGCGGTTTCGTTACTCTTATTGGAACAGTAGCCAGAGCTACGTGCTTACCAAAGGATGGAGCCGGTTCGTTAAGGAGAAGAATCTTCGAGCCGGTGACGCGGTTCAGTTCTTCAAGTCGACCGGACCGGACCGGCAGCTATATATAGACTGCAAGGCGAGGAGTGGTGAGGTTAACAATAATGCTGGCGGTTTGTTTGTTCCGATTGGACCGGTCGTTGAGCCGGTTCAGATGGTTCGGCTTTTCGGGGTCAACCTTTTGAAACTACCCGTACCCGGTTCGGATGGTGTAGGGAAGAGAAAAGAGATGGAACTGTTTGCATTTGAATGTTGCAAGAAGTTAAAAGTAATTGGAGCTTTGTAA
Protein Sequence
- >Glyma.10G204400.1
MDGGCVTDETTTSSDSLSVPPPSRVGSVASAVVDPDGCCVSGEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDIAALRFRGPDAVTNFKPPAASDDAESEFLNSHSKFEIVDMLRKHTYDDELQQSTRGGRRRLDADTASSGVFDAKAREQLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLSGSGDESSPCVAGASAAKGMLLNFEDVGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDAVQFFKSTGPDRQLYIDCKARSGEVNNNAGGLFVPIGPVVEPVQMVRLFGVNLLKLPVPGSDGVGKRKEMELFAFECCKKLKVIGAL*