Gene Details:

  • Gene ID: Glyma.19G143900
  • Gene Symbol: GmPTF1a
  • Gene Name: novel pectate lyase enzyme
  • Genome: Wm82.a4.v1
  • Species: Glycine max

Functional Descriptions:

  • Molecular module GmPTF1a/b-GmNPLa regulates rhizobia infection and nodule formation in soybean.
  • GmPTF1a/b acts as a key early regulator of nodulation in soybean.
  • Expression pattern of GmPTF1a/b during root nodule symbiosis.
  • Manipulating GmPTF1a/b significantly impacts rhizobial infection.
  • GmPTF1a/b coordinately regulates lateral root and nodule formation.
  • GmPTF1a is a direct transcriptional activator of GmNPLa.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions: I1N944

Sequences:

cDNA Sequence
  • >Glyma.19G143900.1
    AGAATCACAGAACCGGAGAGAAAGAGAAAGAAAAAGAAAGAGAGAGAGAATTTCATTGACCGCCATTGAAGCTTTGCTTCTTCTATCTCTCACTCCACTCGTAACGAAATTCCCCACACACATTCTTCATTTCCTCATTTTCTCCAATTTCAACACTGTCACGGTTCAGAATTCGTCCAAGTAAAGACAAAATTCGAGGTGTGTACGGTTCAATTGGACCTTCTACGCTGCGTTTTGTTCGCTCAATGGACCAAGCTCCGGGAGGATTGCGCGGATCCGTTCACCACGGCGCCACGCTCGAGTCAATTCAATTCAACGAAGAAATTCAGGGACTCATGGCGCCGGCGCCGGAAAACGCGAGCTCGTTCACCGCGCTGCTTGAACTCCCGCCGACGCAGGCGGTGGAGCTCCTTCACTCGCCGGAATCTGACAGCGCTCGGAAACCGCCTAATTGCCATGTCAGCGCGAACCAGAAACCCTACCTGCTCAATTCTTTCGGCAGCAATTTGACCTTCCCTTCCAACGCCGCCTTAATCGAACGCGCCGCGAAGTTCTCCGTGTTCGCCGGCGAGAACTCGCCGCCTCCGCCGGGGGAGGCGCGCCTGATTCCAGCAGGAACCGGTTCGACTTTGGACAGAGTGAAGAACGAGCCGCAAGAGACCGATTCGAACCCGTGCTCGAGCTCGAGGCTGGGTTGCATTTCGGATCCCGCGGTTGAAAACAACATTCAGAGGACCGCCAAGAGAAAGGAGCGAGAGAAGAAGGCTAAAGGATCGTCGAAGAAGCGTAAGAGCGCCGCCGATGAGACATCCGGTGACGGCGAGAAGCTTCCCTACGTCCATGTTCGAGTTCGTCGAGGTCAAGCCACTGATAGCCATAGCTTGGCAGAAAGGGCTAGGAGAGAGAAGATCAATGCTCGCATGAAGCTTTTGCAAGAGCTGGTCCCAGGCTGCGACAAGATATCAGGAACGGCAATGGTTCTGGATGAAATCATCAACCATGTGCAATCTCTACAGCGTCAAGTGGAGATCTTATCAATGAAACTGGCAGCAGTTAACCCAAGAATGGATTTCAGCCTCGACAGTTTATTGGCTACTGATGGGGCATCTCTAGTGGATAGTAACTTACCTAGCATGGTGACACCTCTCATGTGGCCAGAAATCCCACTCAATGGCAACCGGCAGCATTATCAACAGCAGTGGCAATTGGATGCATTCCACCAACCGCTATGGGAGAGGGAAGAAGTCAACCATAATTTCATGACTCCGGAAAACTCACTTTTGAGTTATGACTCATCGGCAAACTCAGCGTCTCTGCACTTAAATCAATTGAAGATGGAGCTCTGAAAGCGTACAGAAGTCGTACCAGTAGCTATTAGCCTAGTAGTGTATATATCAAATATAGTATTCGCAGTTAGCAGTGATTTGAGCGGTCTCAACATTTAGCAGGGTTTCTATGTCTTCTATTTGTCAGAGACGGTTGGAAACCTGGATTTTCTTTGGCCAGAAAGTAAGATGAATTGGCATGCTATTCTTATAGTATGATATTATTATTACTATGTATACTAACTATAGGGGTTATTCAATCCATGAGGTGATTGATTCAAGATTGTAAAATCATAGAACGGACTGTTACTACTGAACTATCATGGGAGTGGGTTGCTTTGTTCATTAAATACTACTTAGATGATTGGCTCTTTATGAGGATTTTCCTAAAAAAAGATATTTTAATTCTGAATTACTTGCAG
CDS Sequence
  • >Glyma.19G143900.1
    ATGGACCAAGCTCCGGGAGGATTGCGCGGATCCGTTCACCACGGCGCCACGCTCGAGTCAATTCAATTCAACGAAGAAATTCAGGGACTCATGGCGCCGGCGCCGGAAAACGCGAGCTCGTTCACCGCGCTGCTTGAACTCCCGCCGACGCAGGCGGTGGAGCTCCTTCACTCGCCGGAATCTGACAGCGCTCGGAAACCGCCTAATTGCCATGTCAGCGCGAACCAGAAACCCTACCTGCTCAATTCTTTCGGCAGCAATTTGACCTTCCCTTCCAACGCCGCCTTAATCGAACGCGCCGCGAAGTTCTCCGTGTTCGCCGGCGAGAACTCGCCGCCTCCGCCGGGGGAGGCGCGCCTGATTCCAGCAGGAACCGGTTCGACTTTGGACAGAGTGAAGAACGAGCCGCAAGAGACCGATTCGAACCCGTGCTCGAGCTCGAGGCTGGGTTGCATTTCGGATCCCGCGGTTGAAAACAACATTCAGAGGACCGCCAAGAGAAAGGAGCGAGAGAAGAAGGCTAAAGGATCGTCGAAGAAGCGTAAGAGCGCCGCCGATGAGACATCCGGTGACGGCGAGAAGCTTCCCTACGTCCATGTTCGAGTTCGTCGAGGTCAAGCCACTGATAGCCATAGCTTGGCAGAAAGGGCTAGGAGAGAGAAGATCAATGCTCGCATGAAGCTTTTGCAAGAGCTGGTCCCAGGCTGCGACAAGATATCAGGAACGGCAATGGTTCTGGATGAAATCATCAACCATGTGCAATCTCTACAGCGTCAAGTGGAGATCTTATCAATGAAACTGGCAGCAGTTAACCCAAGAATGGATTTCAGCCTCGACAGTTTATTGGCTACTGATGGGGCATCTCTAGTGGATAGTAACTTACCTAGCATGGTGACACCTCTCATGTGGCCAGAAATCCCACTCAATGGCAACCGGCAGCATTATCAACAGCAGTGGCAATTGGATGCATTCCACCAACCGCTATGGGAGAGGGAAGAAGTCAACCATAATTTCATGACTCCGGAAAACTCACTTTTGAGTTATGACTCATCGGCAAACTCAGCGTCTCTGCACTTAAATCAATTGAAGATGGAGCTCTGA
Protein Sequence
  • >Glyma.19G143900.1
    MDQAPGGLRGSVHHGATLESIQFNEEIQGLMAPAPENASSFTALLELPPTQAVELLHSPESDSARKPPNCHVSANQKPYLLNSFGSNLTFPSNAALIERAAKFSVFAGENSPPPPGEARLIPAGTGSTLDRVKNEPQETDSNPCSSSRLGCISDPAVENNIQRTAKRKEREKKAKGSSKKRKSAADETSGDGEKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSLQRQVEILSMKLAAVNPRMDFSLDSLLATDGASLVDSNLPSMVTPLMWPEIPLNGNRQHYQQQWQLDAFHQPLWEREEVNHNFMTPENSLLSYDSSANSASLHLNQLKMEL*