Information report for GmNIN2a
Gene Details
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Functional Descriptions
- Our results show that GmNIN1a, GmNIN2a, and GmNIN2b function redundantly to mediate rhizobia infection and nodule initiation.
- Overexpression of GmNIN1a, GmNIN1b, GmNIN2a, and GmNIN2b reduced nodule numbers after rhizobia inoculation, with GmNIN1b overexpression having the weakest effect.
- GmNIN1a, GmNIN2a, and GmNIN2b play functionally redundant yet complicated roles in soybean nodulation.
- GmNINs CRISPR–Cas9 mutants were deficient in rhizobia infection and nodule organogenesis.
Literature and News
Gene Resources
- NCBI ID: 100792100
- UniProt accessions: I1JJW0
- EMBL: CM000835
- EnsemblPlants: KRH74096
- Gramene: KRH74096
- KEGG: gmx:100792100
- GO: GO:0003700
- OMA: YESRTIR
- InterPro: IPR000270 , IPR003035 , IPR034891 , IPR045012 , IPR053793 , IPR055081
- PANTHER: PTHR32002 , PTHR32002:SF46
- SUPFAM: SSF54277
- PROSITE: PS51519 , PS51745
- Gene3D: 3.10.20.90
- OrthoDB: I1JJW0
- SMR: I1JJW0
- CDD: cd06407
Homologs
- Cajanus cajan: C.cajan_37712, C.cajan_33924
- Cicer arietinum: XP_004491641.1
- Lotus japonicus: Lj2g3v3373110.1, Lj2g3v3373100.1, Lj0g3v0358669.1, Lj0g3v0358659.1
- Medicago truncatula: Medtr5g099060.1
- Prunus mume: XP_008235979.1
- Prunus persica: Prupe.8G178400.1.p
- Vitis vinifera: GSVIVT01023886001
Sequences
cDNA Sequence
- >Glyma.02G311000.1
ATGTTCAAGTAATCATTCTCTCAAGCAAGCAATGTTAACGTAGTAGTACGGCCCATAAAAGAAAAGAAACTTTACTTGAGTTGAGTGAGCTGAGATCGATCAACAATAGCTACAGCACAGTCCATATTGATATATGTTCGATCGAGAGTAATTAAGGTTAAGGATCGATCAGAGGGATCGTGAGAGGATATTAAAGGAACAGGTAGCATGGAGTATGGTGCGTTTGGGAGCTTGTCGGAGTGTGAAGAAGATTTGATCGAGGAGTTGCTGGAAAAAGGTTGCTGGGTGGAAACGAATGGGAGCAGCGAGGCACAGTACGACATAGAGCAAGAATTAGCCATGCCCATGGGGAAGACCACATGGTGGATTGGACCCAAGGGGCCTGTGTCTGGGTCATCTTCATCCGTGAAAGAGAGATTGGTGGTTGCGGTGGGCTACTTGAGAGAATACACAAAGAACAACAACGCCGCCAACGTGCTCATTCAGATATGGGTTCCCATACGGAGGATGACAGGCCTTCTTGCCATTGGCCTTGGGCCCGATGAGTCGGTTTCGGTTGCTTTTCCTTTTCCGACCAACATGAACATGAACATGAAGTCGAACGTAAACATTCGGTTCTTTAGAAGCCATGAGTACCCGCGAATTCCTTATGAATATGGATCCTTGGCACTTCCTGTCTTCGAAAGAGGCAGTGGCACATGCCTGGGTGTCCTCCAGATTGTAATGCCAGCAGCTCGCTGGGACACAATCAACTATCTCCCTCAACTTGACAACAATAATAATAATAATGCTTTCCAGGGCATGATTCCAGGTGGTGTTGTAAAGGTATTTGACGAGGATGAGGTGTACGAAGCATCAGTGAACGAGATGATGGAGGTGGTGAGGTGTGTGTGCAAGACGCAGAATGTGCCTTTGGCTCTGACATGGGCTCCTTGCGTCCAACAACTATGTGTGGATTGTGGGCATTCAAGGGATGAGAACAACTATGTGTCGATTGTGGACAGAGCGTGTTTTGTGGGGGATGGTCAGCCCCAGCTATTGGGGTTCCAGGAGGCCTGCTCTCAGCACCACCTTTTCCGCGGACAAGGAATTGTCGGTACGGCCTTCACAACTGCCAAGCCCTGTTTTGCTATGGACATAACCGCCTTCACCAAGGCCGAATATCCTCTCTCTCACCACGCCAACATCTTTGACTTGCATTCTGCCGTCGCTATTCCTCTAAGGACTTCTTCTTATCCCCATTTTGATTTTGTCTTGGAGTTCTTCCTTCCCAAACACTGCCCTGACCACAACCTCTTCCTCAACTCCTTATCTATTCTCCTTCAACAAGCTTGCCCCACCTTCCATCTTTCTGCTCCCATCCATGATGATGTATTTACCTCCTTGCCCTCTGAATCCCAGTCCCAGCAGGCTTCCTGGATCGCACATATGATTGATGCCCAATCCCAACACAAGGACAATGGGAAAGGTGTGTGCTTGTCCTTGGATTTCCTGGAAGAAGAACCCAAAGAGGAGTTCAAAGTCACAACAACTCACTGTAACTGGGACACCACTGCCACTAGTACTTATCATTCACACGACCATGTCGTGTTTTCAGATTTTGGAGAAGAATCTCAATCTCAATCTCAATCTCAAACTCACACATTTGGTGTGAAGCGTGGCAGAAAACCAGGAGAGAAGAGACGAACCAAGGCCGAGAAGACTATCAGCTTGCCAGTTCTAAGGCAATACTTTGCAGGAAGCCTAAAAGATGCGGCTAAGAGCATTGGCGTGTGTCCCACAACTCTGAAAAGGATATGCAGACAACATGGCATAACGCGATGGCCTTCAAGGAAAATAAAGAAGGTGGGGCACTCTTTGAAGAAACTACAACTTGTAATTGATTCGGTACAGGGTGCCGAGGGTGCCATACAGATCGGATCCTTCTATAACAGTTTTCCGGAGTTGAGCTCTAGAGCTTCTCAATCATCCTCTCCTGCAGCACAAAGCCCTCCTCATGTTCCTCAACAACCCTTGAGAGTGAAGGCTACTTTTGCGGATGAAAAAATCCGTTTTAGCTTGCAACCACTTTGGGGGTTCACAGAATTGCAGTTGGAAATTTCAAGGCGCTTCAACCTAAGCGATGTTAGCAACGCCAACAACGTGGTTCTAAAGTATTTGGATGATGACGGAGAGTGGGTTGTTTTAGCCTGCGATGGCGATCTTGAGGAGTGTAAAGACTTGCATACAACGTCTCAGAGCCGCACAATTAGACTCGCCCTATTTCAAGCTTCTCCTCTTAATAATCAACCAAATTCATATACTTTCGCCAACACCACCAGCACTCCTTCTTCTTCTTAATTAACACCTTCGTTTCCATCCTAGGCGTCTCTCTATCTGTACCGTCACATTTGTATTGCTGTTGTTTTGCTTTTACTTGTTAGACCCCATCCAGCTTATGAGATGAGACGAGAACCATTTTATTTATATTTGTTACTTCTCTTAATTTCTTATTAAAATGCTAACTTTGCCTTACCTACACTTTATTCACAAGCTCCATATCAGTTGCTCCACCAACTATCCACCCAGCTATATATAACGAAAATTCATATATAGTTGCATAGAAAGGAAATGGTGTGGGGTTGGAAGGGATTTAAGTCAGCTCTTGAAACTGCTTGCTGCTCGATTTCTTAAAGAATAATGATTCAATAAACTTGAAATTTTGGAAAGGAATTCAATTGAATTTT
CDS Sequence
- >Glyma.02G311000.1
ATGGAGTATGGTGCGTTTGGGAGCTTGTCGGAGTGTGAAGAAGATTTGATCGAGGAGTTGCTGGAAAAAGGTTGCTGGGTGGAAACGAATGGGAGCAGCGAGGCACAGTACGACATAGAGCAAGAATTAGCCATGCCCATGGGGAAGACCACATGGTGGATTGGACCCAAGGGGCCTGTGTCTGGGTCATCTTCATCCGTGAAAGAGAGATTGGTGGTTGCGGTGGGCTACTTGAGAGAATACACAAAGAACAACAACGCCGCCAACGTGCTCATTCAGATATGGGTTCCCATACGGAGGATGACAGGCCTTCTTGCCATTGGCCTTGGGCCCGATGAGTCGGTTTCGGTTGCTTTTCCTTTTCCGACCAACATGAACATGAACATGAAGTCGAACGTAAACATTCGGTTCTTTAGAAGCCATGAGTACCCGCGAATTCCTTATGAATATGGATCCTTGGCACTTCCTGTCTTCGAAAGAGGCAGTGGCACATGCCTGGGTGTCCTCCAGATTGTAATGCCAGCAGCTCGCTGGGACACAATCAACTATCTCCCTCAACTTGACAACAATAATAATAATAATGCTTTCCAGGGCATGATTCCAGGTGGTGTTGTAAAGGTATTTGACGAGGATGAGGTGTACGAAGCATCAGTGAACGAGATGATGGAGGTGGTGAGGTGTGTGTGCAAGACGCAGAATGTGCCTTTGGCTCTGACATGGGCTCCTTGCGTCCAACAACTATGTGTGGATTGTGGGCATTCAAGGGATGAGAACAACTATGTGTCGATTGTGGACAGAGCGTGTTTTGTGGGGGATGGTCAGCCCCAGCTATTGGGGTTCCAGGAGGCCTGCTCTCAGCACCACCTTTTCCGCGGACAAGGAATTGTCGGTACGGCCTTCACAACTGCCAAGCCCTGTTTTGCTATGGACATAACCGCCTTCACCAAGGCCGAATATCCTCTCTCTCACCACGCCAACATCTTTGACTTGCATTCTGCCGTCGCTATTCCTCTAAGGACTTCTTCTTATCCCCATTTTGATTTTGTCTTGGAGTTCTTCCTTCCCAAACACTGCCCTGACCACAACCTCTTCCTCAACTCCTTATCTATTCTCCTTCAACAAGCTTGCCCCACCTTCCATCTTTCTGCTCCCATCCATGATGATGTATTTACCTCCTTGCCCTCTGAATCCCAGTCCCAGCAGGCTTCCTGGATCGCACATATGATTGATGCCCAATCCCAACACAAGGACAATGGGAAAGGTGTGTGCTTGTCCTTGGATTTCCTGGAAGAAGAACCCAAAGAGGAGTTCAAAGTCACAACAACTCACTGTAACTGGGACACCACTGCCACTAGTACTTATCATTCACACGACCATGTCGTGTTTTCAGATTTTGGAGAAGAATCTCAATCTCAATCTCAATCTCAAACTCACACATTTGGTGTGAAGCGTGGCAGAAAACCAGGAGAGAAGAGACGAACCAAGGCCGAGAAGACTATCAGCTTGCCAGTTCTAAGGCAATACTTTGCAGGAAGCCTAAAAGATGCGGCTAAGAGCATTGGCGTGTGTCCCACAACTCTGAAAAGGATATGCAGACAACATGGCATAACGCGATGGCCTTCAAGGAAAATAAAGAAGGTGGGGCACTCTTTGAAGAAACTACAACTTGTAATTGATTCGGTACAGGGTGCCGAGGGTGCCATACAGATCGGATCCTTCTATAACAGTTTTCCGGAGTTGAGCTCTAGAGCTTCTCAATCATCCTCTCCTGCAGCACAAAGCCCTCCTCATGTTCCTCAACAACCCTTGAGAGTGAAGGCTACTTTTGCGGATGAAAAAATCCGTTTTAGCTTGCAACCACTTTGGGGGTTCACAGAATTGCAGTTGGAAATTTCAAGGCGCTTCAACCTAAGCGATGTTAGCAACGCCAACAACGTGGTTCTAAAGTATTTGGATGATGACGGAGAGTGGGTTGTTTTAGCCTGCGATGGCGATCTTGAGGAGTGTAAAGACTTGCATACAACGTCTCAGAGCCGCACAATTAGACTCGCCCTATTTCAAGCTTCTCCTCTTAATAATCAACCAAATTCATATACTTTCGCCAACACCACCAGCACTCCTTCTTCTTCTTAA
Protein Sequence
- >Glyma.02G311000.1
MEYGAFGSLSECEEDLIEELLEKGCWVETNGSSEAQYDIEQELAMPMGKTTWWIGPKGPVSGSSSSVKERLVVAVGYLREYTKNNNAANVLIQIWVPIRRMTGLLAIGLGPDESVSVAFPFPTNMNMNMKSNVNIRFFRSHEYPRIPYEYGSLALPVFERGSGTCLGVLQIVMPAARWDTINYLPQLDNNNNNNAFQGMIPGGVVKVFDEDEVYEASVNEMMEVVRCVCKTQNVPLALTWAPCVQQLCVDCGHSRDENNYVSIVDRACFVGDGQPQLLGFQEACSQHHLFRGQGIVGTAFTTAKPCFAMDITAFTKAEYPLSHHANIFDLHSAVAIPLRTSSYPHFDFVLEFFLPKHCPDHNLFLNSLSILLQQACPTFHLSAPIHDDVFTSLPSESQSQQASWIAHMIDAQSQHKDNGKGVCLSLDFLEEEPKEEFKVTTTHCNWDTTATSTYHSHDHVVFSDFGEESQSQSQSQTHTFGVKRGRKPGEKRRTKAEKTISLPVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKVGHSLKKLQLVIDSVQGAEGAIQIGSFYNSFPELSSRASQSSSPAAQSPPHVPQQPLRVKATFADEKIRFSLQPLWGFTELQLEISRRFNLSDVSNANNVVLKYLDDDGEWVVLACDGDLEECKDLHTTSQSRTIRLALFQASPLNNQPNSYTFANTTSTPSSS*