Information report for GmIAA9;qSW2
Gene Details
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Functional Descriptions
- GmIAA9, a candidate gene for an SW QTL identified in a cultivar with SW and high yield, may find application in soybean breeding.
- Given the function of the Aux/IAA gene families, it is implied that Glyma.02 g218100 (GmIAA9) is a candidate gene for SW in soybean, which however needs further functional validation.
- Identification and fine mapping of qSW2 for leaf slow wilting in soybean.
Literature and News
Gene Resources
- NCBI ID: 100818881
- UniProt accessions: I1JH42
- EMBL: CM000835
- EnsemblPlants: KRH72523 , KRH72524 , KRH72525
- Gramene: KRH72523 , KRH72524 , KRH72525
- KEGG: gmx:100818881
- GO: GO:0005634 , GO:0006355 , GO:0009734
- InterPro: IPR003311 , IPR033389 , IPR053793
- PANTHER: PTHR31734 , PTHR31734:SF104
- SUPFAM: SSF54277
- PROSITE: PS51745
- Gene3D: 3.10.20.90
- OrthoDB: I1JH42
- SMR: I1JH42
Homologs
- Actinidia chinensis: CEY00_Acc22763, CEY00_Acc13467, CEY00_Acc25589, CEY00_Acc04212
- Capsicum annuum: T459_07906
- Daucus carota: DCAR_030713
- Gossypium hirsutum: Gohir.D11G132700, Gohir.A07G209000
- Hordeum vulgare: HORVU5Hr1G014300
- Lactuca sativa: gene-LSAT_5X66981
- Manihot esculenta: MANES_03G169700
- Prunus avium: Pav_sc0000983.1_g260.1.mk
- Prunus persica: PRUPE_1G027600
- Rosa chinensis: RchiOBHm_Chr6g0289571
- Sesamum indicum: SIN_1002570
- Solanum lycopersicum: Solyc06g053830.3
- Vitis vinifera: VIT_14s0081g00010, VIT_05s0020g04690
Sequences
cDNA Sequence
- >Glyma.02G218100.3
AATGAATGCACTCGTGATTTGGTAGTTGATAAATTTGAGCCACAAAATAGTAAGAAAAAAATGTGAAAGAATTGTGCTGTTCATCACTGTTCATATTACAGTTTCTTGTAGATATTCTGAATTTTGACTTGCTTCACTTCACCTCAACCTCTTCCTTGAGTAAAAATGGAAATTGCATAAAGGGCAGTGTTTTTCTTGAGACGCTTTCTTTATATTAAAGTCGTATATTTTAATGCATGCTGTCGAGCTTTTGTTACTTTGTGACAAATGGAGGGTCCTTAGTTCTGTTTCTCTTTCTTCTCTCTGTGCTTTCAACCAAGTTCTCAAATCACTCTTCTTCTTCACCCTTCTGATCTGCTAATTCTCAAGGTATTCAAAATTGGGTGGTTTTCGATTGAACTGTGATGTCCAAGCCACTGCTAGGCATAGCGGAAGAGGAAGGTCAAAGCAATGTCACTTTGTTGGTTTCTTCCTCAGCCACCATGGAAAGTGTGTGCCTGAATAGCTCAAAACTGAAAGAGCGCAACTACATGGGGTTATCTGATTGTTCATCTGTGGACAGCTCCGCGCCGTCCTTCTCAGATGAGACTAAGAGCAATCTGAACCTCAAGGCTACTGAGCTCAGACTGGGGCTTCCGGGGTCGCAATCTCCCGAACGAGATTCAGATCTTTGCTTGAGAAGTTCGATTCAGTTTGATGAAAAGCCACTGTTTCCTTTGCATCCTGCAACTGATGAACACCATTCCTCATCAAAGCCTGCTGTTTTGGGAAACAAAAGAGGGTTCTCAGATGTCATGAGTGGATTCGCCGAGGAGAAATTGCTTGTTAGTTCCGAGGTCAACACAATATTGCCACCAAGGCCTTCTTCTAATGTGGGGTTGAAACCAAGCTCTATGCTTGAGAACGTCGGGGCTCAGCAGCAAGCCAAAGAACTCGCAACGGTGAAGGTTGGTCACGAGAGGTCTCATGCTGTCAACGAAAGCAGACCAAATCTTAATGATTCTACTAATAACAATAGCAGTGCACCAGCTACCAAGGCACAGGTTGTTGGTTGGCCTCCTATAAGGTCATTTAGGAAGAATTCATTGGTCACTACTTCAAAGAATGTTGAAGAAGTAGATGGAAAAGTGGGGCCTGGTGCACTGTTTGTAAAGGTCAGTATGGATGGTGCACCTTACTTAAGAAAAGTAGACTTGAAGAATTACAATGCGTATGCCGACCTATCTTCTGCGCTGGAGAATATGTTCAGTTGTTTTACCATAGGTTCTTGTGGATCTCATGGAAATCTGGGAGGGGAGGTGCTGAATGAAACCAAGCTGAAGGATCTGCTTCATGGATCAGAATATGTTCTTACTTACGAGGATAAAGATGGAGACTGGATGCTAGTGGGTGATGTTCCCTGGGAGATGTTTACTGAGACGTGCAAGAGGCTAAGGATTATGAAGAGCTCTGAAGCCATTGGTCTAGCACCAAGAGCTGTTGAAAAAAGTAAGAGCAGGAACTAGGCAGAATTAAGCATCTCATCACACCCTTCTATCCATCTAACTGCTTGTGGGGTTAAAATGTTTTCTTGGCTGTGTGAGGGAGCAACACAAGGCCATAATGGCTTGGAAGCACAACTTAAGGCATGTTTGGACTGGATAGAATTTGGTACTAAAGCTGCCTTGTTGATCATGATATTATTTACTATCGGTGTGTTCTGTTGTCATGATGTTTATATTCAGTAAGCTTTTTTCATGATTGTCACAACTTATAAAACCCCAAAAACCTGTCTGTGGGAGGTTCTTATATTTTTTATGTGCTCTCATGTTCCTGTTGTGGTGAAGGATTTGTAGTTTGTAAATTGGATCATCTCTTCTATGTTTGCAACTTGGTGTGATAAAAAACAAGAAGTTAT - >Glyma.02G218100.1
AATGAATGCACTCGTGATTTGGTAGTTGATAAATTTGAGCCACAAAATAGTAAGAAAAAAATGTGAAAGAATTGTGCTGTTCATCACTGTTCATATTACAGTTTCTTGTAGATATTCTGAATTTTGACTTGCTTCACTTCACCTCAACCTCTTCCTTGAGTAAAAATGGAAATTGCATAAAGGGCAGTGTTTTTCTTGAGACGCTTTCTTTATATTAAAGTCGTATATTTTAATGCATGCTGTCGAGCTTTTGTTACTTTGTGACAAATGGAGGGTCCTTAGTTCTGTTTCTCTTTCTTCTCTCTGTGCTTTCAACCAAGTTCTCAAATCACTCTTCTTCTTCACCCTTCTGATCTGCTAATTCTCAAGGTATTCAAAATTGGGTGGTTTTCGATTGAACTGTGATGTCCAAGCCACTGCTAGGCATAGCGGAAGAGGAAGGTCAAAGCAATGTCACTTTGTTGGTTTCTTCCTCAGCCACCATGGAAAGTGTGTGCCTGAATAGCTCAAAACTGAAAGAGCGCAACTACATGGGGTTATCTGATTGTTCATCTGTGGACAGCTCCGCGCCGTCCTTCTCAGATGAGACTAAGAGCAATCTGAACCTCAAGGCTACTGAGCTCAGACTGGGGCTTCCGGGGTCGCAATCTCCCGAACGAGATTCAGATCTTTGCTTGAGAAGTTCGATTCAGTTTGATGAAAAGCCACTGTTTCCTTTGCATCCTGCAACTGATGAACACCATTCCTCATCAAAGCCTGCTGTTTTGGGAAACAAAAGAGGGTTCTCAGATGTCATGAGTGGATTCGCCGAGGAGAAATTGCTTGTTAGTTCCGAGGTCAACACAATATTGCCACCAAGGCCTTCTTCTAATGTGGGGTTGAAACCAAGCTCTATGCTTGAGAACGTCGGGGCTCAGCAGCAAGCCAAAGAACTCGCAACGGTGAAGGTTGGTCACGAGAGGTCTCATGCTGTCAACGAAAGCAGACCAAATCTTAATGATTCTACTAATAACAATAGCAGTGCACCAGCTACCAAGGCACAGGTTGTTGGTTGGCCTCCTATAAGGTCATTTAGGAAGAATTCATTGGTCACTACTTCAAAGAATGTTGAAGAAGTAGATGGAAAAGTGGGGCCTGGTGCACTGTTTGTAAAGGTCAGTATGGATGGTGCACCTTACTTAAGAAAAGTAGACTTGAAGAATTACAATGCGTATGCCGACCTATCTTCTGCGCTGGAGAATATGTTCAGTTGTTTTACCATAGGTTCTTGTGGATCTCATGGAAATCTGGGAGGGGAGGTGCTGAATGAAACCAAGCTGAAGGATCTGCTTCATGGATCAGAATATGTTCTTACTTACGAGGATAAAGATGGAGACTGGATGCTAGTGGGTGATGTTCCCTGGGAGATGTTTACTGAGACGTGCAAGAGGCTAAGGATTATGAAGAGCTCTGAAGCCATTGGTCTAGCACCAAGAGCTGTTGAAAAAAGTAAGAGCAGGAACTAGGCAGAATTAAGCATCTCATCACACCCTTCTATCCATCTAACTGCTTGTGGGGTTAAAATGTTTTCTTGGCTGTGTGAGGGAGCAACACAAGGCCATAATGGCTTGGAAGCACAACTTAAGGCATGTTTGGACTGGATAGAATTTGGTACTAAAGCTGCCTTGTTGATCATGATATTATTTACTATCGGTGTGTTCTGTTGTCATGATGTTTATATTCAGTAAGCTTTTTTCATGATTGTCACAACTTATAAAACCCCAAAAACCTGTCTGTGGGAGGTTCTTATATTTTTTATGTGCTCTCATGTTCCTGTTGTGGTGAAGGATTTGTAGTTTGTAAATTGGATCATCTCTTCTATGTTTGCAACTTGGTGTGATAAAAAACAAGAAGTTAT
CDS Sequence
- >Glyma.02G218100.3
ATGTCCAAGCCACTGCTAGGCATAGCGGAAGAGGAAGGTCAAAGCAATGTCACTTTGTTGGTTTCTTCCTCAGCCACCATGGAAAGTGTGTGCCTGAATAGCTCAAAACTGAAAGAGCGCAACTACATGGGGTTATCTGATTGTTCATCTGTGGACAGCTCCGCGCCGTCCTTCTCAGATGAGACTAAGAGCAATCTGAACCTCAAGGCTACTGAGCTCAGACTGGGGCTTCCGGGGTCGCAATCTCCCGAACGAGATTCAGATCTTTGCTTGAGAAGTTCGATTCAGTTTGATGAAAAGCCACTGTTTCCTTTGCATCCTGCAACTGATGAACACCATTCCTCATCAAAGCCTGCTGTTTTGGGAAACAAAAGAGGGTTCTCAGATGTCATGAGTGGATTCGCCGAGGAGAAATTGCTTGTTAGTTCCGAGGTCAACACAATATTGCCACCAAGGCCTTCTTCTAATGTGGGGTTGAAACCAAGCTCTATGCTTGAGAACGTCGGGGCTCAGCAGCAAGCCAAAGAACTCGCAACGGTGAAGGTTGGTCACGAGAGGTCTCATGCTGTCAACGAAAGCAGACCAAATCTTAATGATTCTACTAATAACAATAGCAGTGCACCAGCTACCAAGGCACAGGTTGTTGGTTGGCCTCCTATAAGGTCATTTAGGAAGAATTCATTGGTCACTACTTCAAAGAATGTTGAAGAAGTAGATGGAAAAGTGGGGCCTGGTGCACTGTTTGTAAAGGTCAGTATGGATGGTGCACCTTACTTAAGAAAAGTAGACTTGAAGAATTACAATGCGTATGCCGACCTATCTTCTGCGCTGGAGAATATGTTCAGTTGTTTTACCATAGGTTCTTGTGGATCTCATGGAAATCTGGGAGGGGAGGTGCTGAATGAAACCAAGCTGAAGGATCTGCTTCATGGATCAGAATATGTTCTTACTTACGAGGATAAAGATGGAGACTGGATGCTAGTGGGTGATGTTCCCTGGGAGATGTTTACTGAGACGTGCAAGAGGCTAAGGATTATGAAGAGCTCTGAAGCCATTGGTCTAGCACCAAGAGCTGTTGAAAAAAGTAAGAGCAGGAACTAG - >Glyma.02G218100.1
ATGTCCAAGCCACTGCTAGGCATAGCGGAAGAGGAAGGTCAAAGCAATGTCACTTTGTTGGTTTCTTCCTCAGCCACCATGGAAAGTGTGTGCCTGAATAGCTCAAAACTGAAAGAGCGCAACTACATGGGGTTATCTGATTGTTCATCTGTGGACAGCTCCGCGCCGTCCTTCTCAGATGAGACTAAGAGCAATCTGAACCTCAAGGCTACTGAGCTCAGACTGGGGCTTCCGGGGTCGCAATCTCCCGAACGAGATTCAGATCTTTGCTTGAGAAGTTCGATTCAGTTTGATGAAAAGCCACTGTTTCCTTTGCATCCTGCAACTGATGAACACCATTCCTCATCAAAGCCTGCTGTTTTGGGAAACAAAAGAGGGTTCTCAGATGTCATGAGTGGATTCGCCGAGGAGAAATTGCTTGTTAGTTCCGAGGTCAACACAATATTGCCACCAAGGCCTTCTTCTAATGTGGGGTTGAAACCAAGCTCTATGCTTGAGAACGTCGGGGCTCAGCAGCAAGCCAAAGAACTCGCAACGGTGAAGGTTGGTCACGAGAGGTCTCATGCTGTCAACGAAAGCAGACCAAATCTTAATGATTCTACTAATAACAATAGCAGTGCACCAGCTACCAAGGCACAGGTTGTTGGTTGGCCTCCTATAAGGTCATTTAGGAAGAATTCATTGGTCACTACTTCAAAGAATGTTGAAGAAGTAGATGGAAAAGTGGGGCCTGGTGCACTGTTTGTAAAGGTCAGTATGGATGGTGCACCTTACTTAAGAAAAGTAGACTTGAAGAATTACAATGCGTATGCCGACCTATCTTCTGCGCTGGAGAATATGTTCAGTTGTTTTACCATAGGTTCTTGTGGATCTCATGGAAATCTGGGAGGGGAGGTGCTGAATGAAACCAAGCTGAAGGATCTGCTTCATGGATCAGAATATGTTCTTACTTACGAGGATAAAGATGGAGACTGGATGCTAGTGGGTGATGTTCCCTGGGAGATGTTTACTGAGACGTGCAAGAGGCTAAGGATTATGAAGAGCTCTGAAGCCATTGGTCTAGCACCAAGAGCTGTTGAAAAAAGTAAGAGCAGGAACTAG
Protein Sequence
- >Glyma.02G218100.3
MSKPLLGIAEEEGQSNVTLLVSSSATMESVCLNSSKLKERNYMGLSDCSSVDSSAPSFSDETKSNLNLKATELRLGLPGSQSPERDSDLCLRSSIQFDEKPLFPLHPATDEHHSSSKPAVLGNKRGFSDVMSGFAEEKLLVSSEVNTILPPRPSSNVGLKPSSMLENVGAQQQAKELATVKVGHERSHAVNESRPNLNDSTNNNSSAPATKAQVVGWPPIRSFRKNSLVTTSKNVEEVDGKVGPGALFVKVSMDGAPYLRKVDLKNYNAYADLSSALENMFSCFTIGSCGSHGNLGGEVLNETKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTETCKRLRIMKSSEAIGLAPRAVEKSKSRN* - >Glyma.02G218100.1
MSKPLLGIAEEEGQSNVTLLVSSSATMESVCLNSSKLKERNYMGLSDCSSVDSSAPSFSDETKSNLNLKATELRLGLPGSQSPERDSDLCLRSSIQFDEKPLFPLHPATDEHHSSSKPAVLGNKRGFSDVMSGFAEEKLLVSSEVNTILPPRPSSNVGLKPSSMLENVGAQQQAKELATVKVGHERSHAVNESRPNLNDSTNNNSSAPATKAQVVGWPPIRSFRKNSLVTTSKNVEEVDGKVGPGALFVKVSMDGAPYLRKVDLKNYNAYADLSSALENMFSCFTIGSCGSHGNLGGEVLNETKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTETCKRLRIMKSSEAIGLAPRAVEKSKSRN*