Information report for GmFATA1B
Gene Details
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Functional Descriptions
- Natural variation of GmFATA1B regulates seed oil content and composition in soybean.
- Identified GmFATA1B as the gene underlying a QTL that regulates seed oil content and composition, as well as seed size in soybean.
- Nine extra amino acids in the conserved region of GmFATA1B impair its function as a fatty acyl–acyl carrier protein thioesterase, thereby affecting seed oil content and composition.
- Heterogeneously overexpressing the functional GmFATA1B allele in Arabidopsis thaliana increased both the total oil content and the oleic acid and linoleic acid contents of seeds. Our findings uncover a previously unknown locus underlying variation in seed oil content in soybean and lay the foundation for improving seed oil content and composition in soybean.
Functional Keywords
- seed , seed-size , oil-content
Literature and News
Gene Resources
- NCBI ID: 100776450
- UniProt accessions: A0A0R0J2I4
- EMBL: CM000841
- AlphaFoldDB: A0A0R0J2I4
- EnsemblPlants: KRH46659
- Gramene: KRH46659
- GO: GO:0000036 , GO:0009507 , GO:0016297
- OMA: DYRRECK
- InterPro: IPR002864 , IPR029069 , IPR045023 , IPR049427
- PANTHER: PTHR31727 , PTHR31727:SF6
- SUPFAM: SSF54637
- Gene3D: 3.10.129.10
- SMR: A0A0R0J2I4
- CDD: cd00586
Sequences
cDNA Sequence
- >Glyma.08G349200.1
TACTTTATTGGACGGTACAAAAGTTGAAAAAGACGAGGTTGGTTCGGTTTGGTGAAAACAGAGAGGAAAAAACAGAGCCCATTGAGAACACACGTGCTTCATTCACTACTTCAGTGTCGCTTCCCATCTCTATCTCTTTCACAACGTTCTTCAATTCAAAACCACTTGTTTCTTCAGTTCCACTCTGCTTCTTCCCCTTTCTCTTCTCATACTCACCCAGCTTTCCTTTTTATTAAAAAATAAAAAAAAATGTTGAAGCTTTCGTGCAATGGCTTGGACCGGGCTCACTCGCTGGCCCAATGCGGCTTTGCGGGCCGGCCCGCCTGCGTCGTCCCTCGCCGGAGGATAAGCGGCGTCTCCGGATTCTGGTCGCCGGGCGGCAGGGCGATCCGGGTGTCGGCGGCGGTGGTGTCGGCGAAGGATGGCGCGGTGGCGACCCGGGTGGAGGCGGAGTCCGGGACGCTGGCGGACCGGCTGAGGGTGGGGAGCTTGACGGAGGATGGGTTGTCTTACAAGGAGAAGTTCATTGTGAGGAGCTACGAAGTTGGGATCAATAAGACTGCCACTGTTGAAACCATTGCTAATCTCTTGCAGGAGGTTGGATGTAATCATGCTCAGAGTGTTGGATATTCTACTGATGGTTTTGCAACCACCCCTACGATGAGAAAATTGCGTCTCATATGGGTTACTGCTCGCATGCACATTGAAATCTACAAATACCCTGCTTGGAGTGACGTTGTTGAGATAGAGACATGGTGCCAAGGTGAAGGAAGGGTTGGGACAAGGCGTGATTTTATACTGAAAGACTATGCAAGTGATGCAGTCATTGGAAGGGCAACAAGCAAATGGGTAATGATGAATCAGGACACCAGACGACTCCAGAAAGTTTCTGATGATGTTAAAGAAGAGTATTTGGTTTTCTGTCCTCGAGAGCCCAGGTTAGCAATTCCAGAGGCAGATAGCAATAACTTGAAGAAAATACCGAAATTGGAAGACCCTGCCCAGTATTCCAGACTTGGACTTGTGCCAAGAAGAGCGGATCTGGACATGAATCAGCATGTTAACAATGTCACCTATATTGGATGGGTGCTTGAGAGCATGCCTCAAGAAATCATTGATAGTCATGAGTTGCAGAGTATTACCTTGGATTACAGACGAGAGTGCGGACAGCATGACATAGTTGATTCCCTCACTAGTGTGGAAGAAATCCAGGGTGGTGCCGAGGCAGTTTCAGAACTGAAAAGTACAAATGGATCTGCCATGGCAAGGGAAGACAAACATGAACACCAGCAGTTTCTGCATCTACTTAGGTTGTCTACTGAAGGACTTGAGATAAACCGGGGACGAACGGAATGGAGAAAGAAAGCTCCAAGATGAGAACCATTACGTGTGCTTCCACCCAAATCCATGATTCTGTTTTTGTCTTTCTTGTGTTGTTTCACGTTACCAGGGTTGTCTTATCAATTTTCCCTTTATATTTTGCTTAGAGTTTGTGCCCTTAATAGGGGATTGGAGAGTTAAAATTTTGTCGCTGTTTTCTTGTCATGCTCACAAATTTAAATTGTTGTCCAAATCCTGTAGTTAGGCTAAATAGGTTGACATCAATCTCTGATCCATTAGCATCAGATTCCATGAATGTCATTGTACCTTAAGGGAGCATAGAAATCCAGGAAATTGGTATGGTTCTGTCATCTACTGTATGATTCGAACAATGCGTGTTGCTAAAATAATCATTTTAAAATTATTCAATTAGCTAATTATTAATGTTCTGAC
CDS Sequence
- >Glyma.08G349200.1
ATGTTGAAGCTTTCGTGCAATGGCTTGGACCGGGCTCACTCGCTGGCCCAATGCGGCTTTGCGGGCCGGCCCGCCTGCGTCGTCCCTCGCCGGAGGATAAGCGGCGTCTCCGGATTCTGGTCGCCGGGCGGCAGGGCGATCCGGGTGTCGGCGGCGGTGGTGTCGGCGAAGGATGGCGCGGTGGCGACCCGGGTGGAGGCGGAGTCCGGGACGCTGGCGGACCGGCTGAGGGTGGGGAGCTTGACGGAGGATGGGTTGTCTTACAAGGAGAAGTTCATTGTGAGGAGCTACGAAGTTGGGATCAATAAGACTGCCACTGTTGAAACCATTGCTAATCTCTTGCAGGAGGTTGGATGTAATCATGCTCAGAGTGTTGGATATTCTACTGATGGTTTTGCAACCACCCCTACGATGAGAAAATTGCGTCTCATATGGGTTACTGCTCGCATGCACATTGAAATCTACAAATACCCTGCTTGGAGTGACGTTGTTGAGATAGAGACATGGTGCCAAGGTGAAGGAAGGGTTGGGACAAGGCGTGATTTTATACTGAAAGACTATGCAAGTGATGCAGTCATTGGAAGGGCAACAAGCAAATGGGTAATGATGAATCAGGACACCAGACGACTCCAGAAAGTTTCTGATGATGTTAAAGAAGAGTATTTGGTTTTCTGTCCTCGAGAGCCCAGGTTAGCAATTCCAGAGGCAGATAGCAATAACTTGAAGAAAATACCGAAATTGGAAGACCCTGCCCAGTATTCCAGACTTGGACTTGTGCCAAGAAGAGCGGATCTGGACATGAATCAGCATGTTAACAATGTCACCTATATTGGATGGGTGCTTGAGAGCATGCCTCAAGAAATCATTGATAGTCATGAGTTGCAGAGTATTACCTTGGATTACAGACGAGAGTGCGGACAGCATGACATAGTTGATTCCCTCACTAGTGTGGAAGAAATCCAGGGTGGTGCCGAGGCAGTTTCAGAACTGAAAAGTACAAATGGATCTGCCATGGCAAGGGAAGACAAACATGAACACCAGCAGTTTCTGCATCTACTTAGGTTGTCTACTGAAGGACTTGAGATAAACCGGGGACGAACGGAATGGAGAAAGAAAGCTCCAAGATGA
Protein Sequence
- >Glyma.08G349200.1
MLKLSCNGLDRAHSLAQCGFAGRPACVVPRRRISGVSGFWSPGGRAIRVSAAVVSAKDGAVATRVEAESGTLADRLRVGSLTEDGLSYKEKFIVRSYEVGINKTATVETIANLLQEVGCNHAQSVGYSTDGFATTPTMRKLRLIWVTARMHIEIYKYPAWSDVVEIETWCQGEGRVGTRRDFILKDYASDAVIGRATSKWVMMNQDTRRLQKVSDDVKEEYLVFCPREPRLAIPEADSNNLKKIPKLEDPAQYSRLGLVPRRADLDMNQHVNNVTYIGWVLESMPQEIIDSHELQSITLDYRRECGQHDIVDSLTSVEEIQGGAEAVSELKSTNGSAMAREDKHEHQQFLHLLRLSTEGLEINRGRTEWRKKAPR*