Gene Details:
- Gene ID: Glyma.08g349200
- Gene Symbol: GmFATA1B
- Gene Name: GmFATA1B
- Genome: Wm82.a4.v1
- Species: Glycine max
Functional Descriptions:
- Natural variation of GmFATA1B regulates seed oil content and composition in soybean.
- Identified GmFATA1B as the gene underlying a QTL that regulates seed oil content and composition, as well as seed size in soybean.
- Nine extra amino acids in the conserved region of GmFATA1B impair its function as a fatty acyl–acyl carrier protein thioesterase, thereby affecting seed oil content and composition.
- Heterogeneously overexpressing the functional GmFATA1B allele in Arabidopsis thaliana increased both the total oil content and the oleic acid and linoleic acid contents of seeds. Our findings uncover a previously unknown locus underlying variation in seed oil content in soybean and lay the foundation for improving seed oil content and composition in soybean.
Function-related keywords:
- seed , seed-size , oil-content
Literature:
- Natural variation of GmFATA1B regulates seed oil content and composition in soybean. DOI: 10.1111/jipb.13561 ; PMID: 37655952
Related News:
Gene Resources:
- NCBI ID: 100776450
- UniProt accessions: A0A0R0J2I4
Sequences:
cDNA Sequence
- >Glyma.08G349200.1
TACTTTATTGGACGGTACAAAAGTTGAAAAAGACGAGGTTGGTTCGGTTTGGTGAAAACAGAGAGGAAAAAACAGAGCCCATTGAGAACACACGTGCTTCATTCACTACTTCAGTGTCGCTTCCCATCTCTATCTCTTTCACAACGTTCTTCAATTCAAAACCACTTGTTTCTTCAGTTCCACTCTGCTTCTTCCCCTTTCTCTTCTCATACTCACCCAGCTTTCCTTTTTATTAAAAAATAAAAAAAAATGTTGAAGCTTTCGTGCAATGGCTTGGACCGGGCTCACTCGCTGGCCCAATGCGGCTTTGCGGGCCGGCCCGCCTGCGTCGTCCCTCGCCGGAGGATAAGCGGCGTCTCCGGATTCTGGTCGCCGGGCGGCAGGGCGATCCGGGTGTCGGCGGCGGTGGTGTCGGCGAAGGATGGCGCGGTGGCGACCCGGGTGGAGGCGGAGTCCGGGACGCTGGCGGACCGGCTGAGGGTGGGGAGCTTGACGGAGGATGGGTTGTCTTACAAGGAGAAGTTCATTGTGAGGAGCTACGAAGTTGGGATCAATAAGACTGCCACTGTTGAAACCATTGCTAATCTCTTGCAGGAGGTTGGATGTAATCATGCTCAGAGTGTTGGATATTCTACTGATGGTTTTGCAACCACCCCTACGATGAGAAAATTGCGTCTCATATGGGTTACTGCTCGCATGCACATTGAAATCTACAAATACCCTGCTTGGAGTGACGTTGTTGAGATAGAGACATGGTGCCAAGGTGAAGGAAGGGTTGGGACAAGGCGTGATTTTATACTGAAAGACTATGCAAGTGATGCAGTCATTGGAAGGGCAACAAGCAAATGGGTAATGATGAATCAGGACACCAGACGACTCCAGAAAGTTTCTGATGATGTTAAAGAAGAGTATTTGGTTTTCTGTCCTCGAGAGCCCAGGTTAGCAATTCCAGAGGCAGATAGCAATAACTTGAAGAAAATACCGAAATTGGAAGACCCTGCCCAGTATTCCAGACTTGGACTTGTGCCAAGAAGAGCGGATCTGGACATGAATCAGCATGTTAACAATGTCACCTATATTGGATGGGTGCTTGAGAGCATGCCTCAAGAAATCATTGATAGTCATGAGTTGCAGAGTATTACCTTGGATTACAGACGAGAGTGCGGACAGCATGACATAGTTGATTCCCTCACTAGTGTGGAAGAAATCCAGGGTGGTGCCGAGGCAGTTTCAGAACTGAAAAGTACAAATGGATCTGCCATGGCAAGGGAAGACAAACATGAACACCAGCAGTTTCTGCATCTACTTAGGTTGTCTACTGAAGGACTTGAGATAAACCGGGGACGAACGGAATGGAGAAAGAAAGCTCCAAGATGAGAACCATTACGTGTGCTTCCACCCAAATCCATGATTCTGTTTTTGTCTTTCTTGTGTTGTTTCACGTTACCAGGGTTGTCTTATCAATTTTCCCTTTATATTTTGCTTAGAGTTTGTGCCCTTAATAGGGGATTGGAGAGTTAAAATTTTGTCGCTGTTTTCTTGTCATGCTCACAAATTTAAATTGTTGTCCAAATCCTGTAGTTAGGCTAAATAGGTTGACATCAATCTCTGATCCATTAGCATCAGATTCCATGAATGTCATTGTACCTTAAGGGAGCATAGAAATCCAGGAAATTGGTATGGTTCTGTCATCTACTGTATGATTCGAACAATGCGTGTTGCTAAAATAATCATTTTAAAATTATTCAATTAGCTAATTATTAATGTTCTGAC
CDS Sequence
- >Glyma.08G349200.1
ATGTTGAAGCTTTCGTGCAATGGCTTGGACCGGGCTCACTCGCTGGCCCAATGCGGCTTTGCGGGCCGGCCCGCCTGCGTCGTCCCTCGCCGGAGGATAAGCGGCGTCTCCGGATTCTGGTCGCCGGGCGGCAGGGCGATCCGGGTGTCGGCGGCGGTGGTGTCGGCGAAGGATGGCGCGGTGGCGACCCGGGTGGAGGCGGAGTCCGGGACGCTGGCGGACCGGCTGAGGGTGGGGAGCTTGACGGAGGATGGGTTGTCTTACAAGGAGAAGTTCATTGTGAGGAGCTACGAAGTTGGGATCAATAAGACTGCCACTGTTGAAACCATTGCTAATCTCTTGCAGGAGGTTGGATGTAATCATGCTCAGAGTGTTGGATATTCTACTGATGGTTTTGCAACCACCCCTACGATGAGAAAATTGCGTCTCATATGGGTTACTGCTCGCATGCACATTGAAATCTACAAATACCCTGCTTGGAGTGACGTTGTTGAGATAGAGACATGGTGCCAAGGTGAAGGAAGGGTTGGGACAAGGCGTGATTTTATACTGAAAGACTATGCAAGTGATGCAGTCATTGGAAGGGCAACAAGCAAATGGGTAATGATGAATCAGGACACCAGACGACTCCAGAAAGTTTCTGATGATGTTAAAGAAGAGTATTTGGTTTTCTGTCCTCGAGAGCCCAGGTTAGCAATTCCAGAGGCAGATAGCAATAACTTGAAGAAAATACCGAAATTGGAAGACCCTGCCCAGTATTCCAGACTTGGACTTGTGCCAAGAAGAGCGGATCTGGACATGAATCAGCATGTTAACAATGTCACCTATATTGGATGGGTGCTTGAGAGCATGCCTCAAGAAATCATTGATAGTCATGAGTTGCAGAGTATTACCTTGGATTACAGACGAGAGTGCGGACAGCATGACATAGTTGATTCCCTCACTAGTGTGGAAGAAATCCAGGGTGGTGCCGAGGCAGTTTCAGAACTGAAAAGTACAAATGGATCTGCCATGGCAAGGGAAGACAAACATGAACACCAGCAGTTTCTGCATCTACTTAGGTTGTCTACTGAAGGACTTGAGATAAACCGGGGACGAACGGAATGGAGAAAGAAAGCTCCAAGATGA
Protein Sequence
- >Glyma.08G349200.1
MLKLSCNGLDRAHSLAQCGFAGRPACVVPRRRISGVSGFWSPGGRAIRVSAAVVSAKDGAVATRVEAESGTLADRLRVGSLTEDGLSYKEKFIVRSYEVGINKTATVETIANLLQEVGCNHAQSVGYSTDGFATTPTMRKLRLIWVTARMHIEIYKYPAWSDVVEIETWCQGEGRVGTRRDFILKDYASDAVIGRATSKWVMMNQDTRRLQKVSDDVKEEYLVFCPREPRLAIPEADSNNLKKIPKLEDPAQYSRLGLVPRRADLDMNQHVNNVTYIGWVLESMPQEIIDSHELQSITLDYRRECGQHDIVDSLTSVEEIQGGAEAVSELKSTNGSAMAREDKHEHQQFLHLLRLSTEGLEINRGRTEWRKKAPR*