Information report for GmDCL2b
Gene Details
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Functional Descriptions
- Endogenous LIR-derived transcripts in soybean are predominantly processed by GmDCL2 into 22-nucleotide siRNAs and uncovered a role for DCL2 in regulating natural traits.
- Disruption of this process in Gmdcl2a/2b mutants substantially increased CHS mRNA levels in the seed coat, thus changing the coat color from yellow to brown.
- DCL2-Dependent 22-nucleotide siRNAs Regulate the Seed Coat Color in Soybean
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: 100792448
- UniProt accessions: K7LBG6
- EMBL: CM000842
- EnsemblPlants: KRH36816
- Gramene: KRH36816
- KEGG: gmx:100792448
- GO: GO:0003723 , GO:0004386 , GO:0004525 , GO:0005524 , GO:0005634 , GO:0005737 , GO:0030422
- InterPro: IPR000999 , IPR001650 , IPR003100 , IPR005034 , IPR011545 , IPR014001 , IPR014720 , IPR027417 , IPR036085 , IPR036389 , IPR038248
- PANTHER: PTHR14950 , PTHR14950:SF70
- SUPFAM: SSF101690 , SSF52540 , SSF54768 , SSF69065
- PROSITE: PS00517 , PS50142 , PS50821 , PS51192 , PS51194 , PS51327
- Gene3D: 1.10.1520.10 , 2.170.260.10 , 3.30.160.20 , 3.30.160.380 , 3.40.50.300
- OrthoDB: K7LBG6
- SMR: K7LBG6
- CDD: cd00593 , cd18034 , cd18802
Sequences
cDNA Sequence
- >Glyma.09G025300.1
ATACTTCCTTTTGTTTGGTCTTCCACCAACTTTTCTTTCTCGGCAGAGTCTTCTTCTGATTACTTTTTTACGTCAAGCATGGACTCATCGCTCTCACTCTCAGTGTACGGCGGAAAGAAAAGAAAAAGAGAATCAGCACAACGTTCAAATTCATTGGTTGATCAGAAAGGCAAAGAAACCATGGAAGAGGCACCATCAATGGAAATGGATACTGATTCACAGGAGGATCAGAACATTGCTCCTGATGTTCTACCATTTGCTAGAAGCTATCAGCTTGAAGCTTTGTACAAAGCTATCCATGAGAATACCATAGTGTACTTGGAGACTGGTTCAGGCAAGACTTTGATAGCTATCATGCTTCTTCGCAGCTATGCTCATCAACTGCGAAAGCCTTCTCCTTACATTGCAGTGTTCTTGGTTCCCCAAGTTGTGTTGGTCTCTCAACAAGCGGAAGCCGTGAAAAGACATACTGATTTGAAAGTGGGAATGTATTGGGGAGATATGGGAGTTGACTTCTGGGATGCTGCTACCTGGAAACAAGAAATGGAAAAACATGAGGTGCTTGTCATGACTCCTGCAATATTGCTGAGCTGCTTGAGGCATAGCTTCTTCAAACTGAATATGATTAATGTCTTAATAATGGATGAATGCCATCATGCTAGGGGTAAACACCCTTATGCCTGCATCATGACTGAATTTTATCATCATCAATTAAAATCTGGTATCTCTGACCTCCCTCGAATTTTTGGGATGACTGCATCTCCTATTAAGTCGAAAGTTGGAAAATCTGAATCATCCTGGTCAGAGAATATTCAGAAACTAATGATTCTAATGCATTCAAAGGTATATACATGTGTAAGTGAAGCTGTCATCACAGAGTTCATACCAACATCAACACCAAAATTCAAGTTTTACAGCAACAATGGAATTCAATTTGTATTATTTGAAGAATTAGCATCTAAACTCAAGATGTTAAAAGAGCAGCATGAACTCACTCTAAGAAGTTCAGATTTCACTAAATCAATTGCTGAGTCTGCACAAAAAAGAATAACAAAGATTTTTTGTTCTTTAATGTTTTGCCTGGATGAGCTTGGTGTTTGGTTGGCTTTGAAGGCTGCAGAGTCTTTATCTTCCAATGAAATAGAGTCATTTTCATGGGGACACTCTGGGGATAGAGTTGTCAAAGACTTTATTTTGGAAGGTGTACATGCACTTAAAAGTTACTTGCAATGTGATCCTCAGTGGTCTATTGGTGACAATATTAAATCTGATGTGAAGATGGGTCTGTTGACCTCCAAAGTTTGCTGTCTTGTTGACTCTCTACTCGAGTACAGGGGTTTGACTGACATGAGATGCATAATATTTGTGGAAAGGATCATTACAGCCATTGTCCTTGAGGATCTATTGAATACCTTGCTTCCAAAATACAACAGCTGGAAGACTAAATTCATTGCAGGATACAATTTTGGATTGCAAAATCAGTCAAGGACAAAACAAAATGAAATCGTGAATGAATTTCGAATGGGATTGGTTAACATCATTGTTGCAACATCAATTCTTGAAGAGGGTTTAGATGTTCAAAGATGCAATTTAGTTATTAGATTTGATCCATGTCCCACAGTGTGCAGTTTCATACAGTCCCGAGGACGTGCCAGAATGAGAAATTCAGATTACATATTAATGGTTAAGAGTGGGGATTCAGTTACGTGTTCTCGACTAGAGAAATACCTTGCTAGTGCAGATATTATGAGGAAGGAGTCATTGCGTCATTCTTCCCTTCCATGTGATCCTTTTGAAGGTGATGAATTTGATAAGGAAGCTTATCACGTATCAAGCACAGGAGCCATTGCAAATCTTAGTTCTAGCATTAGTTTGATATACTTATATTGCTCGCGCCTCCCTGCAGATGGGTACTTTAAACCAGCTCCAAGGTGGGACAAAGAGACTGGAACACTGTATCTTCCCAAGAGTTGCCCTCTACAGCCTATTTGTGTAGAAGGTAACAAAAAACACTTAAAGAATATCGCATGCCTTGAAGCATGCAAACAACTTCATAAAATTGGAGCTCTGACAGATAATCTTGTTCCTGATATTGTCATTGAAGAAGCAGAGGTGGAGGAATTTGGGAATGAACCTTATGATGAAAACCAACCAACTTTTGTCCCATTTGGATTGGTAAATTCTGTGTCAAATAATAGCCACACGATATACCATTGTTACTTGATGGAACTCAGTCAAAATTTTAGCTATGATATCTCTGTGCAAGATATTTTTCTTGCCATAAGAATTGAGCTTGATCCAGAAATTGGATGCACACAATTTGATATGGGTTTTGACAGAGGTAGCGTGTCACTAAAGTTAAGATACAAAGGAACGATTAATCTTTCGCCAAACCTGGTTCTTTTGTGTAAAAAGTTCCAGGTCACTTTGCTTGGAAGTATCATAGATCATAGCATGAATAAGTTGGCAACTAGTTTAGACAAATGCTATTTGGAAGACAATGTTGAGATTGATTATCTGCTGCTTCCAGCTATTGGTAAAGGGGAAAAATCACATGTAAACTGGTTAGCTATCAAATCTGTAGAACCATCTAGTTTTACGTGTAAGTATCATCAACCCCACATAGAGACAAAAAGTGGTCTAGTTTGCACTTGTAAACTACAAGATGCGTTGGTTTGTACTTCCCATCCTGGTGGTAAGATTTATTTCTATATCACCACTGGTATAATGGAGTTGCATGGAAACTCACCTATGGAACTAAGGGGTGGTGAAGTTACTACATACAAGAAATACTATGAACAACACCATGGCATTCAACTACAATTTGAAAATCAATGGCTACTCAAAGCAAGACACCATTTTAAAGTTAAAAATTACTGTCATGGACAAAAACAAGGGAAGGATGGAGAAGCAAGCAAGGCCTTTGTTGAGTTACCTCCTGAACTGTGCTCTATAGTCATGTCACCGATAAAAGATAGTATCATTTATACCTTCTCATTTATTCCATCAATCATGCATCGGCTGGAATCATTACTTGGAGCTTTCAACTTAAAGAAGATGCATTTGGATCATTGCACACAAAATGAAATTCAAACAATCAAGGTCTTGGAAGCAATAACTACTAAAAGATGCAATGAGGCCTTTCATTATGAGTCTCTAGAGACTCTTGGAGATTCTTTTTTAAAATATGCTGCCAGTCAACAGCTTTTTAAAACATATAAAAATCACCATGAAGGTCTCCTTAGTGTGAAGAGGGAAAAGATCATTTCTAATGCTGCCCTCTGTAAGTTAGGGTGCAGTTCTGGACTTCCGGGCTTCATACGAAATGAGCCTTTTGATCCTCATGCCTGGACCATTCCTGGGGATAAACCTGAAAGTTTAAAATTAGAAGAGCTGGTTATCAAGGGGAAAAAAATTTATGTTCACGGAAAAAGAAAATTAAATCGCAAGATTATTGCTGATGTTGTTGAGGCACTAATTGGTGCCTTCCTCAGTACTGGTGGCGAAATATCTGCATTGCTGTTTATGGATTGGGTTGGTATTAAAGTCAGTTTTGATAAAATACCCTATGAGAGGCACTTTGACATTCAACCTGAGAAACTGTTAAATGTCAGATTCCTAGAATCACAATTAAAATACTCATTCCATGACCATTCTCTTTTAGTGGAAGCCCTAACCCATGGTTCGTACATGCTGCCTGAAGTTCCTAGATGTTATCAGCGACTAGAATTTCTTGGAGATTCAGTTTTGGATTATCTGATTACTTGGCATTTGTACAATGAATATCCTGGCATGTCACCTGGGCAGTTGACTGACATGAGGGCAGCTTCTGTGAATAATGATTGTTATGCATGGTCTGCCATTAAGCATGGGTTGCACAAACATGTACTCCATGCCTCACAAGAACTGCATAAGCACATTGCTGTCACACTTAACAATTTTGATAAGTTGTCTTCATCATCAACTTTTGGATACGAGTCAGAGGCATCACCCCCTAAGGTACTTGGAGACATTATAGAGTCTCTGGCTGGAGCGATTCTTGTTGACTCAGGATTCAATAAGGAGGTTGTGTGGCAAAGCATAAGGCCACTTTTGGAACCCCTTGTGACACCAGAAACATTGAAGCTCCATCCCATCCGAGAGTTGAATGAACTATGCCAGAAAAGAAGTTATAAGATTGTACTAGAGGACGTGTCTCGCAAAGATGGTGTTACTAATTATAGAATGAAGGTAGAAGCTGATGGGGTCATTCACGAGTATGAGTATACCGGCCCTGCTCTTAGGGACACAGCCAAGAAGATAGCCTGCAAGGAAATTTTGAATTCCTTGAAGGAAGATTTATAGGGTACACAAGGGCTAACCGGTCATTGTAGGCTTGTAATACTTGTTAATATTTCTTTAGTCCTTGTTTTGTGTAATGGTTATAATATTAAGGCTTAAATATGTTTATAGTCCCTCAAATTTACGACAACCAATTGTATATATTATTTAAAGATATCATTAAAATATATCATTTAAAGCAAGCATTTGGTTCTTGGTGGCGGG
CDS Sequence
- >Glyma.09G025300.1
ATGGACTCATCGCTCTCACTCTCAGTGTACGGCGGAAAGAAAAGAAAAAGAGAATCAGCACAACGTTCAAATTCATTGGTTGATCAGAAAGGCAAAGAAACCATGGAAGAGGCACCATCAATGGAAATGGATACTGATTCACAGGAGGATCAGAACATTGCTCCTGATGTTCTACCATTTGCTAGAAGCTATCAGCTTGAAGCTTTGTACAAAGCTATCCATGAGAATACCATAGTGTACTTGGAGACTGGTTCAGGCAAGACTTTGATAGCTATCATGCTTCTTCGCAGCTATGCTCATCAACTGCGAAAGCCTTCTCCTTACATTGCAGTGTTCTTGGTTCCCCAAGTTGTGTTGGTCTCTCAACAAGCGGAAGCCGTGAAAAGACATACTGATTTGAAAGTGGGAATGTATTGGGGAGATATGGGAGTTGACTTCTGGGATGCTGCTACCTGGAAACAAGAAATGGAAAAACATGAGGTGCTTGTCATGACTCCTGCAATATTGCTGAGCTGCTTGAGGCATAGCTTCTTCAAACTGAATATGATTAATGTCTTAATAATGGATGAATGCCATCATGCTAGGGGTAAACACCCTTATGCCTGCATCATGACTGAATTTTATCATCATCAATTAAAATCTGGTATCTCTGACCTCCCTCGAATTTTTGGGATGACTGCATCTCCTATTAAGTCGAAAGTTGGAAAATCTGAATCATCCTGGTCAGAGAATATTCAGAAACTAATGATTCTAATGCATTCAAAGGTATATACATGTGTAAGTGAAGCTGTCATCACAGAGTTCATACCAACATCAACACCAAAATTCAAGTTTTACAGCAACAATGGAATTCAATTTGTATTATTTGAAGAATTAGCATCTAAACTCAAGATGTTAAAAGAGCAGCATGAACTCACTCTAAGAAGTTCAGATTTCACTAAATCAATTGCTGAGTCTGCACAAAAAAGAATAACAAAGATTTTTTGTTCTTTAATGTTTTGCCTGGATGAGCTTGGTGTTTGGTTGGCTTTGAAGGCTGCAGAGTCTTTATCTTCCAATGAAATAGAGTCATTTTCATGGGGACACTCTGGGGATAGAGTTGTCAAAGACTTTATTTTGGAAGGTGTACATGCACTTAAAAGTTACTTGCAATGTGATCCTCAGTGGTCTATTGGTGACAATATTAAATCTGATGTGAAGATGGGTCTGTTGACCTCCAAAGTTTGCTGTCTTGTTGACTCTCTACTCGAGTACAGGGGTTTGACTGACATGAGATGCATAATATTTGTGGAAAGGATCATTACAGCCATTGTCCTTGAGGATCTATTGAATACCTTGCTTCCAAAATACAACAGCTGGAAGACTAAATTCATTGCAGGATACAATTTTGGATTGCAAAATCAGTCAAGGACAAAACAAAATGAAATCGTGAATGAATTTCGAATGGGATTGGTTAACATCATTGTTGCAACATCAATTCTTGAAGAGGGTTTAGATGTTCAAAGATGCAATTTAGTTATTAGATTTGATCCATGTCCCACAGTGTGCAGTTTCATACAGTCCCGAGGACGTGCCAGAATGAGAAATTCAGATTACATATTAATGGTTAAGAGTGGGGATTCAGTTACGTGTTCTCGACTAGAGAAATACCTTGCTAGTGCAGATATTATGAGGAAGGAGTCATTGCGTCATTCTTCCCTTCCATGTGATCCTTTTGAAGGTGATGAATTTGATAAGGAAGCTTATCACGTATCAAGCACAGGAGCCATTGCAAATCTTAGTTCTAGCATTAGTTTGATATACTTATATTGCTCGCGCCTCCCTGCAGATGGGTACTTTAAACCAGCTCCAAGGTGGGACAAAGAGACTGGAACACTGTATCTTCCCAAGAGTTGCCCTCTACAGCCTATTTGTGTAGAAGGTAACAAAAAACACTTAAAGAATATCGCATGCCTTGAAGCATGCAAACAACTTCATAAAATTGGAGCTCTGACAGATAATCTTGTTCCTGATATTGTCATTGAAGAAGCAGAGGTGGAGGAATTTGGGAATGAACCTTATGATGAAAACCAACCAACTTTTGTCCCATTTGGATTGGTAAATTCTGTGTCAAATAATAGCCACACGATATACCATTGTTACTTGATGGAACTCAGTCAAAATTTTAGCTATGATATCTCTGTGCAAGATATTTTTCTTGCCATAAGAATTGAGCTTGATCCAGAAATTGGATGCACACAATTTGATATGGGTTTTGACAGAGGTAGCGTGTCACTAAAGTTAAGATACAAAGGAACGATTAATCTTTCGCCAAACCTGGTTCTTTTGTGTAAAAAGTTCCAGGTCACTTTGCTTGGAAGTATCATAGATCATAGCATGAATAAGTTGGCAACTAGTTTAGACAAATGCTATTTGGAAGACAATGTTGAGATTGATTATCTGCTGCTTCCAGCTATTGGTAAAGGGGAAAAATCACATGTAAACTGGTTAGCTATCAAATCTGTAGAACCATCTAGTTTTACGTGTAAGTATCATCAACCCCACATAGAGACAAAAAGTGGTCTAGTTTGCACTTGTAAACTACAAGATGCGTTGGTTTGTACTTCCCATCCTGGTGGTAAGATTTATTTCTATATCACCACTGGTATAATGGAGTTGCATGGAAACTCACCTATGGAACTAAGGGGTGGTGAAGTTACTACATACAAGAAATACTATGAACAACACCATGGCATTCAACTACAATTTGAAAATCAATGGCTACTCAAAGCAAGACACCATTTTAAAGTTAAAAATTACTGTCATGGACAAAAACAAGGGAAGGATGGAGAAGCAAGCAAGGCCTTTGTTGAGTTACCTCCTGAACTGTGCTCTATAGTCATGTCACCGATAAAAGATAGTATCATTTATACCTTCTCATTTATTCCATCAATCATGCATCGGCTGGAATCATTACTTGGAGCTTTCAACTTAAAGAAGATGCATTTGGATCATTGCACACAAAATGAAATTCAAACAATCAAGGTCTTGGAAGCAATAACTACTAAAAGATGCAATGAGGCCTTTCATTATGAGTCTCTAGAGACTCTTGGAGATTCTTTTTTAAAATATGCTGCCAGTCAACAGCTTTTTAAAACATATAAAAATCACCATGAAGGTCTCCTTAGTGTGAAGAGGGAAAAGATCATTTCTAATGCTGCCCTCTGTAAGTTAGGGTGCAGTTCTGGACTTCCGGGCTTCATACGAAATGAGCCTTTTGATCCTCATGCCTGGACCATTCCTGGGGATAAACCTGAAAGTTTAAAATTAGAAGAGCTGGTTATCAAGGGGAAAAAAATTTATGTTCACGGAAAAAGAAAATTAAATCGCAAGATTATTGCTGATGTTGTTGAGGCACTAATTGGTGCCTTCCTCAGTACTGGTGGCGAAATATCTGCATTGCTGTTTATGGATTGGGTTGGTATTAAAGTCAGTTTTGATAAAATACCCTATGAGAGGCACTTTGACATTCAACCTGAGAAACTGTTAAATGTCAGATTCCTAGAATCACAATTAAAATACTCATTCCATGACCATTCTCTTTTAGTGGAAGCCCTAACCCATGGTTCGTACATGCTGCCTGAAGTTCCTAGATGTTATCAGCGACTAGAATTTCTTGGAGATTCAGTTTTGGATTATCTGATTACTTGGCATTTGTACAATGAATATCCTGGCATGTCACCTGGGCAGTTGACTGACATGAGGGCAGCTTCTGTGAATAATGATTGTTATGCATGGTCTGCCATTAAGCATGGGTTGCACAAACATGTACTCCATGCCTCACAAGAACTGCATAAGCACATTGCTGTCACACTTAACAATTTTGATAAGTTGTCTTCATCATCAACTTTTGGATACGAGTCAGAGGCATCACCCCCTAAGGTACTTGGAGACATTATAGAGTCTCTGGCTGGAGCGATTCTTGTTGACTCAGGATTCAATAAGGAGGTTGTGTGGCAAAGCATAAGGCCACTTTTGGAACCCCTTGTGACACCAGAAACATTGAAGCTCCATCCCATCCGAGAGTTGAATGAACTATGCCAGAAAAGAAGTTATAAGATTGTACTAGAGGACGTGTCTCGCAAAGATGGTGTTACTAATTATAGAATGAAGGTAGAAGCTGATGGGGTCATTCACGAGTATGAGTATACCGGCCCTGCTCTTAGGGACACAGCCAAGAAGATAGCCTGCAAGGAAATTTTGAATTCCTTGAAGGAAGATTTATAG
Protein Sequence
- >Glyma.09G025300.1
MDSSLSLSVYGGKKRKRESAQRSNSLVDQKGKETMEEAPSMEMDTDSQEDQNIAPDVLPFARSYQLEALYKAIHENTIVYLETGSGKTLIAIMLLRSYAHQLRKPSPYIAVFLVPQVVLVSQQAEAVKRHTDLKVGMYWGDMGVDFWDAATWKQEMEKHEVLVMTPAILLSCLRHSFFKLNMINVLIMDECHHARGKHPYACIMTEFYHHQLKSGISDLPRIFGMTASPIKSKVGKSESSWSENIQKLMILMHSKVYTCVSEAVITEFIPTSTPKFKFYSNNGIQFVLFEELASKLKMLKEQHELTLRSSDFTKSIAESAQKRITKIFCSLMFCLDELGVWLALKAAESLSSNEIESFSWGHSGDRVVKDFILEGVHALKSYLQCDPQWSIGDNIKSDVKMGLLTSKVCCLVDSLLEYRGLTDMRCIIFVERIITAIVLEDLLNTLLPKYNSWKTKFIAGYNFGLQNQSRTKQNEIVNEFRMGLVNIIVATSILEEGLDVQRCNLVIRFDPCPTVCSFIQSRGRARMRNSDYILMVKSGDSVTCSRLEKYLASADIMRKESLRHSSLPCDPFEGDEFDKEAYHVSSTGAIANLSSSISLIYLYCSRLPADGYFKPAPRWDKETGTLYLPKSCPLQPICVEGNKKHLKNIACLEACKQLHKIGALTDNLVPDIVIEEAEVEEFGNEPYDENQPTFVPFGLVNSVSNNSHTIYHCYLMELSQNFSYDISVQDIFLAIRIELDPEIGCTQFDMGFDRGSVSLKLRYKGTINLSPNLVLLCKKFQVTLLGSIIDHSMNKLATSLDKCYLEDNVEIDYLLLPAIGKGEKSHVNWLAIKSVEPSSFTCKYHQPHIETKSGLVCTCKLQDALVCTSHPGGKIYFYITTGIMELHGNSPMELRGGEVTTYKKYYEQHHGIQLQFENQWLLKARHHFKVKNYCHGQKQGKDGEASKAFVELPPELCSIVMSPIKDSIIYTFSFIPSIMHRLESLLGAFNLKKMHLDHCTQNEIQTIKVLEAITTKRCNEAFHYESLETLGDSFLKYAASQQLFKTYKNHHEGLLSVKREKIISNAALCKLGCSSGLPGFIRNEPFDPHAWTIPGDKPESLKLEELVIKGKKIYVHGKRKLNRKIIADVVEALIGAFLSTGGEISALLFMDWVGIKVSFDKIPYERHFDIQPEKLLNVRFLESQLKYSFHDHSLLVEALTHGSYMLPEVPRCYQRLEFLGDSVLDYLITWHLYNEYPGMSPGQLTDMRAASVNNDCYAWSAIKHGLHKHVLHASQELHKHIAVTLNNFDKLSSSSTFGYESEASPPKVLGDIIESLAGAILVDSGFNKEVVWQSIRPLLEPLVTPETLKLHPIRELNELCQKRSYKIVLEDVSRKDGVTNYRMKVEADGVIHEYEYTGPALRDTAKKIACKEILNSLKEDL*