Gene Details:

Functional Descriptions:

  • GmTIR1/GmAFB3-based auxin perception regulated by miR393 modulates soybean nodulation.
  • GmTIR1 and GmAFB3 genes exhibit diverse expression patterns during nodulation and overexpression of GmTIR1 genes significantly increased inflection foci and eventual nodule number.
  • The GmTIR1A, GmTIR1C and GmAFB3A genes are the direct targets of soybean miR393.
  • GmTIR1- and GmAFB3-mediated auxin signaling, that is spatio-temporally regulated by miR393, plays a crucial role in determinate nodule development in soybean.

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • >Glyma.19G100200.1
    ACAGCATATACATAGCAGAGAGTGTAAGAGACTTTTAGCAGAGGGTGAGGCTCACTTAGAAAGCAGTGACAAGGACTGATGCATGTTCACGCACTCAACGGTCAAGATTCTCTCAACATCATCAAAAATCGACGCCTACCCTTTCTCTCTTTTCCATTCCAAACTCCCCCAACCAACCATCCATCCATCCATCCATCGTGATCGTGGTTCACTTTGAGTTAGGATAAGGTAACCATGGTTAAATAAATCTACACTCAACCAATTGTGTTGTGTTTACCTTACTTGGTTGCTTTCACTTCTTCCTCTCTGCTTCTTCTTCTTCCTTGCCCTCTCTCGCTATTGAGCTTTTCTTTTTAACACGGAATATGAGTGACACAAAAGGGTTTTGAGGCTTTCTATCACTCTAAAGCTCTTAGCTCATTCACCTCTTGGGTGGTGTGGTCTATTATGTAAATTACCATTTGTGCAATTTTTTCTCAGATCTATCCAACTTCTCTTTTTTATCCTTTATTCTGTTTGCAAATCGCCATCATCACCATTTGATTTGCAAGACCATAATTTTTCTGCTTTGGTTTTCCCCTCTTCCACATCATTTTTCAATTTTTTTTCCTCTGGGTGTTTTCTTCCTGAGAAAATTTTGTTCTTTTTGGCTACCCTCCAAGCAGATCCTACTTGGGAAAAGTAAAATTTTCAGTTTTTTTTTTATCAGTACCCTCTTTTCAGACCTTACCCTCATGTTCTAGATTTGAAGATATTGTCATTACCTCACTCTTATTTGTGCCAAGATCTGCTCCCCCTTTTTCTTCTTTTAGATCTTGGTCTGTTCCATGATGTAGTAGTACTTCAAAGTTGAGAGCTTTACCTTTCTGGGGTTTTGTTTTATTTATTTTTCATCCTCCCCTTTGGAGTATGAAAATTTTCCTGGAAAATTGGGGAGTTTGGATCACTGAGTGAGAGAAAAGAAGAGAGAAAAAAAAGATGATGAATTATTTCCCCGACGAGGTAATAGAGCACATATTTGACTATGTGGTGTCACACAGTGACAGAAATGCTTTGTCTTTGGTGTGCAAAAGTTGGTACAGAATAGAGAGGTGTACGAGGCAAAGGGTGTTCATAGGGAACTGTTACTCCATCACTCCAGAGAGGTTGATCCAGAGGTTTCCTGGTCTAAAGTCTTTGACTTTGAAGGGAAAGCCTCATTTTGCTGACTTCAGTTTGGTGCCTTATGATTGGGGTGGCTTTGTGCATCCATGGGTTGAGGCACTGGCCAAGAGCAGGGTTGGTTTGGAGGAGCTTAGGCTCAAGAGGATGGTGGTCTCGGATGAGAGCCTGGAGCTACTTTCTCGTTCTTTCACACACTTCAAGTCTTTGGTTCTTGTTAGCTGTGAAGGGTTCTCTACCGATGGCCTTGCTGCTATAGCTGCAAATTGCAGGTTCCTTAGGGAGCTGGATCTGCAAGAAAATGAAGTTGAGGATCACAAAGGCCAATGGCTAAGTTGCTTTCCTGATAACTGCACATCACTTGTTTCTCTTAATTTTGCTTGCCTTAAAGGAGAGGTTAGTTTGGGAGCACTAGAGAGATTTGTGGCCAGATCTCCTAACCTGAAGAGTTTAAAGCTGAATCGTTCGGTGCCCGTTGATGCACTGCAAAGGATAATGATGCGAGCACCTCAACTATCGGATTTGGGTATTGGATCACTTGTCCATGATCCAGAATCGGAGGCCTACATAAAGCTTAAGAATACCATTCTCAAGTGCAAGTCCATAACCAGTTTGTCTGGGTTTTTGGAAGTTGCTCCTCATTGTCTTGCAGCTATATATCCTATTTGCCCGAACTTAACATCTTTGAACTTGAGCTATGCAGCAGGCATTCAGGGAAGTGCTCTGGTAAAACTAATTCATCACTGTGTTAAACTTCAGCGCTTATGGATAATGGATTGCATTGGAGACAAAGGACTAGGTGTTGTAGCTACGACATGTAAAGATTTGCAAGAATTGAGGGTTTTTCCATCTGTTCCCTTTGGGGATCCAGCAGCTGTCACAGAAAAAGGGCTGGTTGCAATATCAATGGGCTGCCCTAAGCTTCACTCGTTACTCTACTTCTGCCACCAGATGACAAATGCTGCACTCATAACAGTGGCTAAGAACTGCCCAAATTTTATTCGATTCAGGTTGTGTATCCTTGATGCAACAAAACCTGACCCTGATACAATGCAGCCACTGGACGAAGGTTTTGGCGCAATTGTGCAGTCTTGCAGGCGACTCAGGCGCCTATCTCTCTCGGGGAAATTGACTGACCAGGTTTTCCTTTACATAGGAATGTATGCTGAGAAACTTGAAATGCTGTCTATTGCATTTGCTGGGGATGGTGACAAGGGAATGCTGTATGTGTTGAATGGATGCAAGAAGCTTAGGAAGCTTGAGATAAGAGACTGCCCTTTTGGCGACATGGCACTTCTGACGGACGTAGGGAAGTATGAAACAATGCGATCCCTTTGGATGTCGTCCTGTGAAGTGACTGTCGGAGCCTGCAAGTTGCTAGCCAAGAAGATGCCAAGGTTGAATGTGGAGATCTTCAATGAAAACGAGCAAGAAGATTGTAGTCTGGAAGATGGGCAGAAGGTAGAGAAGATGTATTTGTATCGTACATTGGCTGGGAAAAGGAAAGATGCACCAGAATATGTATGGACTCTGTAGGTGCATTTTTTAGGTCATTTAATTTCTTGTTATTCAGAAGTTTGTACTTGTTTTTAGGCTGACTGAATTAATGCAATTTTAGCCGGGTGTAGTGTTTTGTAACTTCCTTGCATTTGCTAGTTTTATACATATGTTAGTTTGTCTTTTCTCCTAGATATTATTATTCCATAATGCCACTTTTTATTACGTATATTATTAGAGTATTTTGCTT
CDS Sequence
  • >Glyma.19G100200.1
    ATGATGAATTATTTCCCCGACGAGGTAATAGAGCACATATTTGACTATGTGGTGTCACACAGTGACAGAAATGCTTTGTCTTTGGTGTGCAAAAGTTGGTACAGAATAGAGAGGTGTACGAGGCAAAGGGTGTTCATAGGGAACTGTTACTCCATCACTCCAGAGAGGTTGATCCAGAGGTTTCCTGGTCTAAAGTCTTTGACTTTGAAGGGAAAGCCTCATTTTGCTGACTTCAGTTTGGTGCCTTATGATTGGGGTGGCTTTGTGCATCCATGGGTTGAGGCACTGGCCAAGAGCAGGGTTGGTTTGGAGGAGCTTAGGCTCAAGAGGATGGTGGTCTCGGATGAGAGCCTGGAGCTACTTTCTCGTTCTTTCACACACTTCAAGTCTTTGGTTCTTGTTAGCTGTGAAGGGTTCTCTACCGATGGCCTTGCTGCTATAGCTGCAAATTGCAGGTTCCTTAGGGAGCTGGATCTGCAAGAAAATGAAGTTGAGGATCACAAAGGCCAATGGCTAAGTTGCTTTCCTGATAACTGCACATCACTTGTTTCTCTTAATTTTGCTTGCCTTAAAGGAGAGGTTAGTTTGGGAGCACTAGAGAGATTTGTGGCCAGATCTCCTAACCTGAAGAGTTTAAAGCTGAATCGTTCGGTGCCCGTTGATGCACTGCAAAGGATAATGATGCGAGCACCTCAACTATCGGATTTGGGTATTGGATCACTTGTCCATGATCCAGAATCGGAGGCCTACATAAAGCTTAAGAATACCATTCTCAAGTGCAAGTCCATAACCAGTTTGTCTGGGTTTTTGGAAGTTGCTCCTCATTGTCTTGCAGCTATATATCCTATTTGCCCGAACTTAACATCTTTGAACTTGAGCTATGCAGCAGGCATTCAGGGAAGTGCTCTGGTAAAACTAATTCATCACTGTGTTAAACTTCAGCGCTTATGGATAATGGATTGCATTGGAGACAAAGGACTAGGTGTTGTAGCTACGACATGTAAAGATTTGCAAGAATTGAGGGTTTTTCCATCTGTTCCCTTTGGGGATCCAGCAGCTGTCACAGAAAAAGGGCTGGTTGCAATATCAATGGGCTGCCCTAAGCTTCACTCGTTACTCTACTTCTGCCACCAGATGACAAATGCTGCACTCATAACAGTGGCTAAGAACTGCCCAAATTTTATTCGATTCAGGTTGTGTATCCTTGATGCAACAAAACCTGACCCTGATACAATGCAGCCACTGGACGAAGGTTTTGGCGCAATTGTGCAGTCTTGCAGGCGACTCAGGCGCCTATCTCTCTCGGGGAAATTGACTGACCAGGTTTTCCTTTACATAGGAATGTATGCTGAGAAACTTGAAATGCTGTCTATTGCATTTGCTGGGGATGGTGACAAGGGAATGCTGTATGTGTTGAATGGATGCAAGAAGCTTAGGAAGCTTGAGATAAGAGACTGCCCTTTTGGCGACATGGCACTTCTGACGGACGTAGGGAAGTATGAAACAATGCGATCCCTTTGGATGTCGTCCTGTGAAGTGACTGTCGGAGCCTGCAAGTTGCTAGCCAAGAAGATGCCAAGGTTGAATGTGGAGATCTTCAATGAAAACGAGCAAGAAGATTGTAGTCTGGAAGATGGGCAGAAGGTAGAGAAGATGTATTTGTATCGTACATTGGCTGGGAAAAGGAAAGATGCACCAGAATATGTATGGACTCTGTAG
Protein Sequence
  • >Glyma.19G100200.1
    MMNYFPDEVIEHIFDYVVSHSDRNALSLVCKSWYRIERCTRQRVFIGNCYSITPERLIQRFPGLKSLTLKGKPHFADFSLVPYDWGGFVHPWVEALAKSRVGLEELRLKRMVVSDESLELLSRSFTHFKSLVLVSCEGFSTDGLAAIAANCRFLRELDLQENEVEDHKGQWLSCFPDNCTSLVSLNFACLKGEVSLGALERFVARSPNLKSLKLNRSVPVDALQRIMMRAPQLSDLGIGSLVHDPESEAYIKLKNTILKCKSITSLSGFLEVAPHCLAAIYPICPNLTSLNLSYAAGIQGSALVKLIHHCVKLQRLWIMDCIGDKGLGVVATTCKDLQELRVFPSVPFGDPAAVTEKGLVAISMGCPKLHSLLYFCHQMTNAALITVAKNCPNFIRFRLCILDATKPDPDTMQPLDEGFGAIVQSCRRLRRLSLSGKLTDQVFLYIGMYAEKLEMLSIAFAGDGDKGMLYVLNGCKKLRKLEIRDCPFGDMALLTDVGKYETMRSLWMSSCEVTVGACKLLAKKMPRLNVEIFNENEQEDCSLEDGQKVEKMYLYRTLAGKRKDAPEYVWTL*