Gene Details:
- Gene ID: Glyma.19g143900
- Gene Symbol: GmPTF1
- Gene Name:
- Genome: Wm82.a4.v1
- Species: Glycine max
Functional Descriptions:
- GmPTF1 modifies root architecture responses to phosphate starvation primarily through regulating GmEXPB2 expression in soybean.
- Demonstrated that GmPTF1, a basic-helix-loop-helix transcription factor, is the regulatory factor responsible for the induction of GmEXPB2 expression in response to Pi starvation.
- Both GmPTF1 and GmEXPB2 highly expressed in lateral roots, and were significantly enhanced by P deficiency.
- This work identifies a novel regulatory factor, GmPTF1, involved in changing soybean root architecture partially through regulation of the expression of GmEXPB2 by binding the E-box motif in its promoter region.
Function-related keywords:
- transcription-factor , root , architecture , lateral-root , phosphate , pi , root-architecture , phosphate-starvation , phosphate-starvation-response
Literature:
- GmPTF1 modifies root architecture responses to phosphate starvation primarily through regulating GmEXPB2 expression in soybean. DOI: 10.1111/tpj.15307 ; PMID: 33960526
Related News:
Gene Resources:
- NCBI ID:
- UniProt accessions: I1N944
Orthologs:
Sequences:
cDNA Sequence
- >Glyma.19G143900.1
AGAATCACAGAACCGGAGAGAAAGAGAAAGAAAAAGAAAGAGAGAGAGAATTTCATTGACCGCCATTGAAGCTTTGCTTCTTCTATCTCTCACTCCACTCGTAACGAAATTCCCCACACACATTCTTCATTTCCTCATTTTCTCCAATTTCAACACTGTCACGGTTCAGAATTCGTCCAAGTAAAGACAAAATTCGAGGTGTGTACGGTTCAATTGGACCTTCTACGCTGCGTTTTGTTCGCTCAATGGACCAAGCTCCGGGAGGATTGCGCGGATCCGTTCACCACGGCGCCACGCTCGAGTCAATTCAATTCAACGAAGAAATTCAGGGACTCATGGCGCCGGCGCCGGAAAACGCGAGCTCGTTCACCGCGCTGCTTGAACTCCCGCCGACGCAGGCGGTGGAGCTCCTTCACTCGCCGGAATCTGACAGCGCTCGGAAACCGCCTAATTGCCATGTCAGCGCGAACCAGAAACCCTACCTGCTCAATTCTTTCGGCAGCAATTTGACCTTCCCTTCCAACGCCGCCTTAATCGAACGCGCCGCGAAGTTCTCCGTGTTCGCCGGCGAGAACTCGCCGCCTCCGCCGGGGGAGGCGCGCCTGATTCCAGCAGGAACCGGTTCGACTTTGGACAGAGTGAAGAACGAGCCGCAAGAGACCGATTCGAACCCGTGCTCGAGCTCGAGGCTGGGTTGCATTTCGGATCCCGCGGTTGAAAACAACATTCAGAGGACCGCCAAGAGAAAGGAGCGAGAGAAGAAGGCTAAAGGATCGTCGAAGAAGCGTAAGAGCGCCGCCGATGAGACATCCGGTGACGGCGAGAAGCTTCCCTACGTCCATGTTCGAGTTCGTCGAGGTCAAGCCACTGATAGCCATAGCTTGGCAGAAAGGGCTAGGAGAGAGAAGATCAATGCTCGCATGAAGCTTTTGCAAGAGCTGGTCCCAGGCTGCGACAAGATATCAGGAACGGCAATGGTTCTGGATGAAATCATCAACCATGTGCAATCTCTACAGCGTCAAGTGGAGATCTTATCAATGAAACTGGCAGCAGTTAACCCAAGAATGGATTTCAGCCTCGACAGTTTATTGGCTACTGATGGGGCATCTCTAGTGGATAGTAACTTACCTAGCATGGTGACACCTCTCATGTGGCCAGAAATCCCACTCAATGGCAACCGGCAGCATTATCAACAGCAGTGGCAATTGGATGCATTCCACCAACCGCTATGGGAGAGGGAAGAAGTCAACCATAATTTCATGACTCCGGAAAACTCACTTTTGAGTTATGACTCATCGGCAAACTCAGCGTCTCTGCACTTAAATCAATTGAAGATGGAGCTCTGAAAGCGTACAGAAGTCGTACCAGTAGCTATTAGCCTAGTAGTGTATATATCAAATATAGTATTCGCAGTTAGCAGTGATTTGAGCGGTCTCAACATTTAGCAGGGTTTCTATGTCTTCTATTTGTCAGAGACGGTTGGAAACCTGGATTTTCTTTGGCCAGAAAGTAAGATGAATTGGCATGCTATTCTTATAGTATGATATTATTATTACTATGTATACTAACTATAGGGGTTATTCAATCCATGAGGTGATTGATTCAAGATTGTAAAATCATAGAACGGACTGTTACTACTGAACTATCATGGGAGTGGGTTGCTTTGTTCATTAAATACTACTTAGATGATTGGCTCTTTATGAGGATTTTCCTAAAAAAAGATATTTTAATTCTGAATTACTTGCAG
CDS Sequence
- >Glyma.19G143900.1
ATGGACCAAGCTCCGGGAGGATTGCGCGGATCCGTTCACCACGGCGCCACGCTCGAGTCAATTCAATTCAACGAAGAAATTCAGGGACTCATGGCGCCGGCGCCGGAAAACGCGAGCTCGTTCACCGCGCTGCTTGAACTCCCGCCGACGCAGGCGGTGGAGCTCCTTCACTCGCCGGAATCTGACAGCGCTCGGAAACCGCCTAATTGCCATGTCAGCGCGAACCAGAAACCCTACCTGCTCAATTCTTTCGGCAGCAATTTGACCTTCCCTTCCAACGCCGCCTTAATCGAACGCGCCGCGAAGTTCTCCGTGTTCGCCGGCGAGAACTCGCCGCCTCCGCCGGGGGAGGCGCGCCTGATTCCAGCAGGAACCGGTTCGACTTTGGACAGAGTGAAGAACGAGCCGCAAGAGACCGATTCGAACCCGTGCTCGAGCTCGAGGCTGGGTTGCATTTCGGATCCCGCGGTTGAAAACAACATTCAGAGGACCGCCAAGAGAAAGGAGCGAGAGAAGAAGGCTAAAGGATCGTCGAAGAAGCGTAAGAGCGCCGCCGATGAGACATCCGGTGACGGCGAGAAGCTTCCCTACGTCCATGTTCGAGTTCGTCGAGGTCAAGCCACTGATAGCCATAGCTTGGCAGAAAGGGCTAGGAGAGAGAAGATCAATGCTCGCATGAAGCTTTTGCAAGAGCTGGTCCCAGGCTGCGACAAGATATCAGGAACGGCAATGGTTCTGGATGAAATCATCAACCATGTGCAATCTCTACAGCGTCAAGTGGAGATCTTATCAATGAAACTGGCAGCAGTTAACCCAAGAATGGATTTCAGCCTCGACAGTTTATTGGCTACTGATGGGGCATCTCTAGTGGATAGTAACTTACCTAGCATGGTGACACCTCTCATGTGGCCAGAAATCCCACTCAATGGCAACCGGCAGCATTATCAACAGCAGTGGCAATTGGATGCATTCCACCAACCGCTATGGGAGAGGGAAGAAGTCAACCATAATTTCATGACTCCGGAAAACTCACTTTTGAGTTATGACTCATCGGCAAACTCAGCGTCTCTGCACTTAAATCAATTGAAGATGGAGCTCTGA
Protein Sequence
- >Glyma.19G143900.1
MDQAPGGLRGSVHHGATLESIQFNEEIQGLMAPAPENASSFTALLELPPTQAVELLHSPESDSARKPPNCHVSANQKPYLLNSFGSNLTFPSNAALIERAAKFSVFAGENSPPPPGEARLIPAGTGSTLDRVKNEPQETDSNPCSSSRLGCISDPAVENNIQRTAKRKEREKKAKGSSKKRKSAADETSGDGEKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSLQRQVEILSMKLAAVNPRMDFSLDSLLATDGASLVDSNLPSMVTPLMWPEIPLNGNRQHYQQQWQLDAFHQPLWEREEVNHNFMTPENSLLSYDSSANSASLHLNQLKMEL*