Information report for GmCOL1b
Gene Details
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Functional Descriptions
- GmCOL1a and GmCOL1b Function as Flowering Repressors in Soybean Under Long-Day Conditions.
- Here, we analyze the expression patterns of E1, E2 and GmCOL1a/1b using near-isogenic lines (NILs), and we further analyze flowering-related genes in GmCOL1b mutants and GmCOL1a-overexpressing plants.
- The spatial and temporal patterns of GmCOL1a/1b expression were more similar to those of AtCOL2 than to those of AtCO, GmCOL1b mutants flowered earlier than wild-type plants under long-day (LD) conditions, and the overexpression of GmCOL1a caused late flowering under LD or natural conditions.
- We conclude that these genes may function as part of a negative feedback loop, and GmCOL1a/GmCOL1b genes may serve as suppressors in photoperiodic flowering in soybean under LD conditions.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: 100301886
- UniProt accessions: I1N4U7
- EMBL: CM000851
- AlphaFoldDB: I1N4U7
- EnsemblPlants: KRH01455
- Gramene: KRH01455
- GO: GO:0005634 , GO:0008270 , GO:0009909 , GO:2000028
- OMA: KSHMHHE
- InterPro: IPR000315 , IPR010402 , IPR045281 , IPR049808
- PANTHER: PTHR31319 , PTHR31319:SF39
- PROSITE: PS50119 , PS51017
- OrthoDB: I1N4U7
- SMR: I1N4U7
- CDD: cd19757 , cd19821
Sequences
cDNA Sequence
- >Glyma.18G278100.1
GAGTTTCTTCTCTTCACTCTCAGAACACTAACTCCCCCAATGTTGGAGGGCCAAGCAACAACGCCCACGTGGCCGCGCATGTGCGACACGTGCCGCTCCGTCCCCTCCACCGTCTTCTGCCGCTCCCACACCGCCTTTCTCTGCGCCACGTGCGACACTCGCCTCCACGTCTCTCTCACGTGGCACGAGCGCGTGTGGGTGTGCGAGGCGTGCGAGCGCGCCCCGGCGGCGTTCCTCTGCAAGGCCGACGCCGCCTCCCTCTGCGCCTCCTGCGACGCCGACATCCACGCCGCCAACCCCCTCGCCAGCCGCCACCACCGCGTCCCCATCCTCCCCATCGCCGCCGCCAACAACAACAACAACGACGACGACGACGTTGCTGACGTTGACGACGAAGACGAAACCGCTTCATGGCTCTTGCTCAACCCTATCAAGAGTGCTACTGTCCCTAACACCAATAACAATAACAATAATAACGGGTTCTTGTATAACGGTGAGGTTGATGAGTATTTGGACCTTGTTGATAATTGTAACTCTTGTGGTGATAATAATCACTTCGCTTCAGCTGCTGCTACTACTGATCATTACGCTCAGCACCAACATTTCGCTGGTGTTTCTCAGAAGAGTTATGCTGGGGACAGTGTTGTTCCGGTTCAGCAACACCAGCATTTTCAGCTTGGGTTGGAGTTTGACAACTCCAAACCTGCCTTCAGTTACAATGGTTCTGTTAGTCAAAGTGTTTCAGTTTCATCAATGGATATTGGTGTTGTACCTGAATCACCAATGAGGGATGTCTCAATTGCCCATACAAGACCCCCCAAAGGGACAATTGACCTATTTTCTGGACCTCCAATTCAGGTGCCTTCCCATTTTTCTCCAATGGACAGGGAGGCCAGAGTCCTAAGGTACAGGGAGAAAAAGAAGATGAGAAAATTTGAGAAGACAATCAGGTATGCCTCAAGGAAGGCCTATGCAGAGACTAGACCTCGTATAAAAGGTCGATTTGCCAAGAGAACAGATGTAGAAGCTGAAGTGGATCAGATGTTCTCGACAACACTAATTACAGAAGTTGGATATGGAATTGTTCCCTCTTTCTGAATATGCTGTGTAGAACAAATGGCCAGAAGACATTGAAGATGCTAGAGGATCATGATTAATAGAAATGGAAACCACTTGTGTACTAAGTTATTCTGCTGATAATGTATTTTTTATGTAATCTAATTGCTTGCAGTTGTACTAATCGGATGCTTTATTATTTTGTTTATTGTCTTTTGAATGAAACTTGTATTTGTAAATACAGTCCTTGTATTAAATTATTAAATTACAGTCAAGTCAATCATATCTCGAAAATTTTTCATTTTCTCAATTTCTATCATGGTGTGTAATTGCTAGAATGATAAGCAACTAATAAACTTCTGTTTGCG - >Glyma.18G278100.2
GAGTTTCTTCTCTTCACTCTCAGAACACTAACTCCCCCAATGTTGGAGGGCCAAGCAACAACGCCCACGTGGCCGCGCATGTGCGACACGTGCCGCTCCGTCCCCTCCACCGTCTTCTGCCGCTCCCACACCGCCTTTCTCTGCGCCACGTGCGACACTCGCCTCCACGTCTCTCTCACGTGGCACGAGCGCGTGTGGGTGTGCGAGGCGTGCGAGCGCGCCCCGGCGGCGTTCCTCTGCAAGGCCGACGCCGCCTCCCTCTGCGCCTCCTGCGACGCCGACATCCACGCCGCCAACCCCCTCGCCAGCCGCCACCACCGCGTCCCCATCCTCCCCATCGCCGCCGCCAACAACAACAACAACGACGACGACGACGTTGCTGACGTTGACGACGAAGACGAAACCGCTTCATGGCTCTTGCTCAACCCTATCAAGAGTGCTACTGTCCCTAACACCAATAACAATAACAATAATAACGGGTTCTTGTATAACGGTGAGGTTGATGAGTATTTGGACCTTGTTGATAATTGTAACTCTTGTGGTGATAATAATCACTTCGCTTCAGCTGCTGCTACTACTGATCATTACGCTCAGCACCAACATTTCGCTGGTGTTTCTCAGAAGAGTTATGCTGGGGACAGTGTTGTTCCGGTTCAGCAACACCAGCATTTTCAGCTTGGGTTGGAGTTTGACAACTCCAAACCTGCCTTCAGTTACAATGGTTCTGTTAGTCAAAGTGTTTCAGTTTCATCAATGGATATTGGTGTTGTACCTGAATCACCAATGAGGGATGTCTCAATTGCCCATACAAGACCCCCCAAAGGGACAATTGACCTATTTTCTGGACCTCCAATTCAGGTGCCTTCCCATTTTTCTCCAATGGACAGGGAGGCCAGAGTCCTAAGGTACAGGGAGAAAAAGAAGATGAGAAAATTTGAGAAGACAATCAGGTATGCCTCAAGGAAGGCCTATGCAGAGACTAGACCTCGTATAAAAGGTCGATTTGCCAAGAGAACAGATGTAGAAGCTGAAGTGGATCAGATGTTCTCGACAACACTAATTACAGAAGTTGGATATGGAATTGTTCCCTCTTTCTGAATATGCTGTGTAGAACAAATGGCCAGAAGACATTGAAGATGCTAGAGGATCATGATTAATAGAAATGGAAACCACTTGTGTACTAAGTTATTCTGCTGATAATGTATTTTTTATGTAATCTAATTGCTTGCAGTTGTACTAATCGGATGCTTTATTATTTTGTTTATTGTCTTTTGAATGAAACTTGTATTTGTAAATACAGTCCTTGTATTAAATTATTAAATTACAGTCAAGTCAATCATATCTCGAAAATTTTTCATTTTCTCAATTTCTATCATGGTGTGTAATTGCTAGAATGATAAGCAACTAATAAACTTCTGTTTGCG
CDS Sequence
- >Glyma.18G278100.1
ATGTTGGAGGGCCAAGCAACAACGCCCACGTGGCCGCGCATGTGCGACACGTGCCGCTCCGTCCCCTCCACCGTCTTCTGCCGCTCCCACACCGCCTTTCTCTGCGCCACGTGCGACACTCGCCTCCACGTCTCTCTCACGTGGCACGAGCGCGTGTGGGTGTGCGAGGCGTGCGAGCGCGCCCCGGCGGCGTTCCTCTGCAAGGCCGACGCCGCCTCCCTCTGCGCCTCCTGCGACGCCGACATCCACGCCGCCAACCCCCTCGCCAGCCGCCACCACCGCGTCCCCATCCTCCCCATCGCCGCCGCCAACAACAACAACAACGACGACGACGACGTTGCTGACGTTGACGACGAAGACGAAACCGCTTCATGGCTCTTGCTCAACCCTATCAAGAGTGCTACTGTCCCTAACACCAATAACAATAACAATAATAACGGGTTCTTGTATAACGGTGAGGTTGATGAGTATTTGGACCTTGTTGATAATTGTAACTCTTGTGGTGATAATAATCACTTCGCTTCAGCTGCTGCTACTACTGATCATTACGCTCAGCACCAACATTTCGCTGGTGTTTCTCAGAAGAGTTATGCTGGGGACAGTGTTGTTCCGGTTCAGCAACACCAGCATTTTCAGCTTGGGTTGGAGTTTGACAACTCCAAACCTGCCTTCAGTTACAATGGTTCTGTTAGTCAAAGTGTTTCAGTTTCATCAATGGATATTGGTGTTGTACCTGAATCACCAATGAGGGATGTCTCAATTGCCCATACAAGACCCCCCAAAGGGACAATTGACCTATTTTCTGGACCTCCAATTCAGGTGCCTTCCCATTTTTCTCCAATGGACAGGGAGGCCAGAGTCCTAAGGTACAGGGAGAAAAAGAAGATGAGAAAATTTGAGAAGACAATCAGGTATGCCTCAAGGAAGGCCTATGCAGAGACTAGACCTCGTATAAAAGGTCGATTTGCCAAGAGAACAGATGTAGAAGCTGAAGTGGATCAGATGTTCTCGACAACACTAATTACAGAAGTTGGATATGGAATTGTTCCCTCTTTCTGA - >Glyma.18G278100.2
ATGTTGGAGGGCCAAGCAACAACGCCCACGTGGCCGCGCATGTGCGACACGTGCCGCTCCGTCCCCTCCACCGTCTTCTGCCGCTCCCACACCGCCTTTCTCTGCGCCACGTGCGACACTCGCCTCCACGTCTCTCTCACGTGGCACGAGCGCGTGTGGGTGTGCGAGGCGTGCGAGCGCGCCCCGGCGGCGTTCCTCTGCAAGGCCGACGCCGCCTCCCTCTGCGCCTCCTGCGACGCCGACATCCACGCCGCCAACCCCCTCGCCAGCCGCCACCACCGCGTCCCCATCCTCCCCATCGCCGCCGCCAACAACAACAACAACGACGACGACGACGTTGCTGACGTTGACGACGAAGACGAAACCGCTTCATGGCTCTTGCTCAACCCTATCAAGAGTGCTACTGTCCCTAACACCAATAACAATAACAATAATAACGGGTTCTTGTATAACGGTGAGGTTGATGAGTATTTGGACCTTGTTGATAATTGTAACTCTTGTGGTGATAATAATCACTTCGCTTCAGCTGCTGCTACTACTGATCATTACGCTCAGCACCAACATTTCGCTGGTGTTTCTCAGAAGAGTTATGCTGGGGACAGTGTTGTTCCGGTTCAGCAACACCAGCATTTTCAGCTTGGGTTGGAGTTTGACAACTCCAAACCTGCCTTCAGTTACAATGGTTCTGTTAGTCAAAGTGTTTCAGTTTCATCAATGGATATTGGTGTTGTACCTGAATCACCAATGAGGGATGTCTCAATTGCCCATACAAGACCCCCCAAAGGGACAATTGACCTATTTTCTGGACCTCCAATTCAGGTGCCTTCCCATTTTTCTCCAATGGACAGGGAGGCCAGAGTCCTAAGGTACAGGGAGAAAAAGAAGATGAGAAAATTTGAGAAGACAATCAGGTATGCCTCAAGGAAGGCCTATGCAGAGACTAGACCTCGTATAAAAGGTCGATTTGCCAAGAGAACAGATGTAGAAGCTGAAGTGGATCAGATGTTCTCGACAACACTAATTACAGAAGTTGGATATGGAATTGTTCCCTCTTTCTGA
Protein Sequence
- >Glyma.18G278100.1
MLEGQATTPTWPRMCDTCRSVPSTVFCRSHTAFLCATCDTRLHVSLTWHERVWVCEACERAPAAFLCKADAASLCASCDADIHAANPLASRHHRVPILPIAAANNNNNDDDDVADVDDEDETASWLLLNPIKSATVPNTNNNNNNNGFLYNGEVDEYLDLVDNCNSCGDNNHFASAAATTDHYAQHQHFAGVSQKSYAGDSVVPVQQHQHFQLGLEFDNSKPAFSYNGSVSQSVSVSSMDIGVVPESPMRDVSIAHTRPPKGTIDLFSGPPIQVPSHFSPMDREARVLRYREKKKMRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEAEVDQMFSTTLITEVGYGIVPSF* - >Glyma.18G278100.2
MLEGQATTPTWPRMCDTCRSVPSTVFCRSHTAFLCATCDTRLHVSLTWHERVWVCEACERAPAAFLCKADAASLCASCDADIHAANPLASRHHRVPILPIAAANNNNNDDDDVADVDDEDETASWLLLNPIKSATVPNTNNNNNNNGFLYNGEVDEYLDLVDNCNSCGDNNHFASAAATTDHYAQHQHFAGVSQKSYAGDSVVPVQQHQHFQLGLEFDNSKPAFSYNGSVSQSVSVSSMDIGVVPESPMRDVSIAHTRPPKGTIDLFSGPPIQVPSHFSPMDREARVLRYREKKKMRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEAEVDQMFSTTLITEVGYGIVPSF*