Information report for GmSTF3
Gene Details
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Functional Descriptions
- Shoot-to-root communication via GmUVR8-GmSTF3 photosignaling and flavonoid biosynthesis fine-tunes soybean nodulation under UV-B light.
- We clarify a fine-tuning mechanism in response to ultraviolet B (UV-B) irradiation and rhizobia infection, involving GmUVR8-dependent UV-B perception and GmSTF3/4-GmMYB12-GmCHS-mediated (iso)flavonoid biosynthesis for soybean nodule formation.
- The mobile transcription factors, GmSTF3/4, bind to cis-regulatory elements in the GmMYB12L, GmMYB12B2, and GmCHS9 promoters, to coordinate UV-B light perception in shoot and (iso)flavonoid biosynthesis in root.
- The mobile transcription factors GmSTF3 and GmSTF4, which are stimulated by UV-B light, activate the expression of GmMYB12L, GmMYB12B2, and GmCHS9, to coordinate shoot-derived UV-B perception and root-derived isoflavone biosynthesis.
Functional Keywords
- root , shoot , flavonoid , flavonoid-biosynthesis , nodule , nodulation
Literature and News
Gene Resources
- NCBI ID: 778143
- UniProt accessions: I1MMC8
- EMBL: CM000849
- EnsemblPlants: KRH07487
- Gramene: KRH07487
- GO: GO:0000981 , GO:0005634 , GO:0010017 , GO:0010099 , GO:0010114 , GO:0010218 , GO:0045944
- OMA: RKVIMNT
- InterPro: IPR004827 , IPR044280 , IPR046347
- PANTHER: PTHR46714 , PTHR46714:SF5
- SUPFAM: SSF57959
- PROSITE: PS00036 , PS50217
- Gene3D: 1.20.5.490
- OrthoDB: I1MMC8
- SMR: I1MMC8
- CDD: cd14704
Sequences
cDNA Sequence
- >Glyma.16G092700.1
AAGTCTAAATTTAAAATTTGGAGGGCAAATTTTGTCATTCATGGAAATCTTGACCAACTCGAGTAGAATTGTCTCCTGTGAGATACTTGAAGTTTCGTACCAAATTTTTTTTTGCTAACGGAACCCTAGAATGCTGTCATAAGCATAAATAGGTGGAAATAGTGGACCACGCGAATTAGAATTTAGAAGCAGAGTATTTGTCATTTGTGTAGTTGCCATTACAAATGGTGTTAGGAAAGGGGCGGTTCTGTGTACATCAACGTGTTCATTTGTGAACCAAACTTTTTGGCCCCATTCCCATGTTTCATCGTCAATGGTTTTGGGATGAGATGGTTCCATCCAAGACTTCATGGCCCCATCTTGCACACACACACGTACTAGTACTACACATTTACACTTTTTTCCTTCGTTAAAAAATCCCTTTGTTGTTGAGAAGGAAAAAAATAGCTACCCTTCAGAGCAAAGAAAGAGAGAAAAAAATGTCTCTTCCAAGACCCAGTGAGGGTAAAGCCCCTTCTCAGCTGAAAGAAGGAGTAGCACCTGCTGCTGCTGCAGCCTCATCCTCTTCTTCATGGAATAATAGGCTACACACTTTCCCTCCTTTGTCTCTACACAACAAGAGTAGCAAAATTGAAGACAGTGATGAAGATATGTTCACAGTTCCTGATGTGGAAACCACACCAGTTAGTGTTCATTCTGCAGCGACTCTTCAAAATAGTAACCTTACTCAACGTAATGTGACAGACCCTCAATTTCAAACTGGCTTTCCTGGAAAGCGCCGCAGGGGAAGAAACCCTGCAGATAAGGAACATAGACGCCTCAAGAGGTTGTTGCGAAACAGGGTCTCTGCCCAACAAGCCCGCGAAAGAAAGAAGGTTTATGTGAATGACTTGGAATCAAGAGCTAAAGAGTTGCAAGATAAAAACGCTATCTTAGAAGAACGTATCTCTACTTTAATCAATGAGAACACCATGCTGCGGAAGGTTCTTATGAACGCGAGGCCAAAAACTGATGATAGCATTGAACAAAAGCAAGACCAGTTAAGTAAGAGCTAACAAGCAAAGCTAGAGGGTGCGTCAAAGTAAGGCATTCAAGAGATGCATTTATGATTTATTTTAGACACTAGAAATTGTAAATTTATAAATATATGATTATTTTATTTCTTTACTCGTTATTATACTTCCCTCAAGACCATAGAGTTGAATTCAAAAAGAAACTTCATTGTGGTGTAAAATTTAATCCAGACTTTATATAAAAAGTCATTTGCAATCAGTAATTCTCAATTGAGCATGAGGTGTCTCCAGCCTCCATCGATCCACACTTAAGTGTGAGAGTATTATCTGTTGAATAGTATTTTTTTTTTTATTCATTACCCTTTATTTCTTGATTCATTCAAGAGTAGTAATTT - >Glyma.16G092700.2
AAGTCTAAATTTAAAATTTGGAGGGCAAATTTTGTCATTCATGGAAATCTTGACCAACTCGAGTAGAATTGTCTCCTGTGAGATACTTGAAGTTTCGTACCAAATTTTTTTTTGCTAACGGAACCCTAGAATGCTGTCATAAGCATAAATAGGTGGAAATAGTGGACCACGCGAATTAGAATTTAGAAGCAGAGTATTTGTCATTTGTGTAGTTGCCATTACAAATGGTGTTAGGAAAGGGGCGGTTCTGTGTACATCAACGTGTTCATTTGTGAACCAAACTTTTTGGCCCCATTCCCATGTTTCATCGTCAATGGTTTTGGGATGAGATGGTTCCATCCAAGACTTCATGGCCCCATCTTGCACACACACACGTACTAGTACTACACATTTACACTTTTTTCCTTCGTTAAAAAATCCCTTTGTTGTTGAGAAGGAAAAAAATAGCTACCCTTCAGAGCAAAGAAAGAGAGAAAAAAATGTCTCTTCCAAGACCCAGTGAGGGTAAAGCCCCTTCTCAGCTGAAAGAAGGAGTAGCACCTGCTGCTGCTGCAGCCTCATCCTCTTCTTCATGGAATAATAGGCTACACACTTTCCCTCCTTTGTCTCTACACAACAAGAGTAGCAAAATTGAAGACAGTGATGAAGATATGTTCACAGTTCCTGATGTGGAAACCACACCAGTTAGTGTTCATTCTGCAGCGACTCTTCAAAATAGTAACCTTACTCAACGTAATGTGACAGACCCTCAATTTCAAACTGGCTTTCCTGGAAAGCGCCGCAGGGGAAGAAACCCTGCAGATAAGGAACATAGACGCCTCAAGAGGTTGTTGCGAAACAGGGTCTCTGCCCAACAAGCCCGCGAAAGAAAGAAGGTTTATGTGAATGACTTGGAATCAAGAGCTAAAGAGTTGCAAGATAAAAACGCTATCTTAGAAGAACGTATCTCTACTTTAATCAATGAGAACACCATGCTGCGGAAGGTTCTTATGAACGCGAGGCCAAAAACTGATGATAGCATTGAACAAAAGCAAGACCAGTTAAGTAAGAGCTAACAAGCAAAGCTAGAGGGTGCGTCAAAGTAAGGCATTCAAGAGATGCATTTATGATTTATTTTAGACACTAGAAATTGTAAATTTATAAATATATGATTATTTTATTTCTTTACTCGTTATTATACTTCCCTCAAGACCATAGAGTTGAATTCAAAAAGAAACTTCATTGTGGTGTAAAATTTAATCCAGACTTTATATAAAAAGTCATTTGCAATCAGTAATTCTCAATTGAGCATGAGGTGTCTCCAGCCTCCATCGATCCACACTTAAGTGTGAGAGTATTATCTGTTGAATAGTATTTTTTTTTTTATTCATTACCCTTTATTTCTTGATTCATTCAAGAGTAGTAATTT
CDS Sequence
- >Glyma.16G092700.1
ATGTCTCTTCCAAGACCCAGTGAGGGTAAAGCCCCTTCTCAGCTGAAAGAAGGAGTAGCACCTGCTGCTGCTGCAGCCTCATCCTCTTCTTCATGGAATAATAGGCTACACACTTTCCCTCCTTTGTCTCTACACAACAAGAGTAGCAAAATTGAAGACAGTGATGAAGATATGTTCACAGTTCCTGATGTGGAAACCACACCAGTTAGTGTTCATTCTGCAGCGACTCTTCAAAATAGTAACCTTACTCAACGTAATGTGACAGACCCTCAATTTCAAACTGGCTTTCCTGGAAAGCGCCGCAGGGGAAGAAACCCTGCAGATAAGGAACATAGACGCCTCAAGAGGTTGTTGCGAAACAGGGTCTCTGCCCAACAAGCCCGCGAAAGAAAGAAGGTTTATGTGAATGACTTGGAATCAAGAGCTAAAGAGTTGCAAGATAAAAACGCTATCTTAGAAGAACGTATCTCTACTTTAATCAATGAGAACACCATGCTGCGGAAGGTTCTTATGAACGCGAGGCCAAAAACTGATGATAGCATTGAACAAAAGCAAGACCAGTTAAGTAAGAGCTAA - >Glyma.16G092700.2
ATGTCTCTTCCAAGACCCAGTGAGGGTAAAGCCCCTTCTCAGCTGAAAGAAGGAGTAGCACCTGCTGCTGCTGCAGCCTCATCCTCTTCTTCATGGAATAATAGGCTACACACTTTCCCTCCTTTGTCTCTACACAACAAGAGTAGCAAAATTGAAGACAGTGATGAAGATATGTTCACAGTTCCTGATGTGGAAACCACACCAGTTAGTGTTCATTCTGCAGCGACTCTTCAAAATAGTAACCTTACTCAACGTAATGTGACAGACCCTCAATTTCAAACTGGCTTTCCTGGAAAGCGCCGCAGGGGAAGAAACCCTGCAGATAAGGAACATAGACGCCTCAAGAGGTTGTTGCGAAACAGGGTCTCTGCCCAACAAGCCCGCGAAAGAAAGAAGGTTTATGTGAATGACTTGGAATCAAGAGCTAAAGAGTTGCAAGATAAAAACGCTATCTTAGAAGAACGTATCTCTACTTTAATCAATGAGAACACCATGCTGCGGAAGGTTCTTATGAACGCGAGGCCAAAAACTGATGATAGCATTGAACAAAAGCAAGACCAGTTAAGTAAGAGCTAA
Protein Sequence
- >Glyma.16G092700.1
MSLPRPSEGKAPSQLKEGVAPAAAAASSSSSWNNRLHTFPPLSLHNKSSKIEDSDEDMFTVPDVETTPVSVHSAATLQNSNLTQRNVTDPQFQTGFPGKRRRGRNPADKEHRRLKRLLRNRVSAQQARERKKVYVNDLESRAKELQDKNAILEERISTLINENTMLRKVLMNARPKTDDSIEQKQDQLSKS* - >Glyma.16G092700.2
MSLPRPSEGKAPSQLKEGVAPAAAAASSSSSWNNRLHTFPPLSLHNKSSKIEDSDEDMFTVPDVETTPVSVHSAATLQNSNLTQRNVTDPQFQTGFPGKRRRGRNPADKEHRRLKRLLRNRVSAQQARERKKVYVNDLESRAKELQDKNAILEERISTLINENTMLRKVLMNARPKTDDSIEQKQDQLSKS*