Information report for GmBIR1
Gene Details
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Functional Descriptions
- The soybean immune receptor GmBIR1 regulates host transcriptome, spliceome, and immunity during cyst nematode infection.
- Overexpression of wild-type variant of GmBIR1 (WT-GmBIR1) using transgenic soybean hairy roots significantly increased soybean susceptibility to SCN, whereas overexpression of kinase-dead variant (KD-GmBIR1) significantly increased plant resistance.
- Genome-wide analysis of splicing events provided compelling evidence supporting a role of the GmBIR1 signaling pathway in establishing alternative splicing during SCN infection.
- Our results provide novel mechanistic insights into the function of the GmBIR1 signaling pathway in regulating soybean transcriptome and spliceome via differential phosphorylation of splicing factors and regulation of splicing events of pre-mRNA decay- and spliceosome-related genes.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: 100305365
- UniProt accessions: K7MFU0
- EMBL: CM000849
- EnsemblPlants: KRH07291
- Gramene: KRH07291
- GO: GO:0004672 , GO:0005524 , GO:0016020
- OMA: GMFFFVR
- InterPro: IPR000719 , IPR001245 , IPR001611 , IPR011009 , IPR013210 , IPR032675 , IPR051824
- PANTHER: PTHR48006 , PTHR48006:SF86
- SUPFAM: SSF52058 , SSF56112
- PROSITE: PS50011
- Gene3D: 1.10.510.10 , 3.30.200.20 , 3.80.10.10
- OrthoDB: K7MFU0
- SMR: K7MFU0
- CDD: cd14066
Sequences
cDNA Sequence
- >Glyma.16G079200.1
ACAGCAACTCAGGGAAGCACTTTTCACAAGTCTTCGCGTTTCTATGGTCCAAGTCTTTCCTCTATTGCTTGGAAATTTTTGGCTTTAACTTCTTTGACCCGTTCCACTTTCTTTTATATTTCTTCACATTCACATCCACACTATCATCTAAAACGCTCTCAAAGAGCCGAATTACCTGAAAGCTTCATGGGGTTTCCTGAATTTGGCTGTCAAAAAACCCAGGTGGGTATTTCAGCACTTTTGCAAAATTTCATTTTTTTTTTCTTCCATTTCATGTTTTGGAATAAACTTTACTACTGGGTTTCTCTGGGTTTTGATGTTTTCTTCTTCTTTTGTCAATTGTTCTTGCTTTGTTGCAGTATGAGTTTTGGTCTGAAGTATAGATTCTTTTTGTCTTTTTATGCTGTTGACTTGGTTTTGTATGAGGTGATGAACTGTGTTTTATGCTGTTTTGTTTTGTTTTCAATTGTTTCTCATGATGTGTTATTGGGAGGGTTGTAGTGCTATGAAGTTTATATGTGGTGCTGTGACTTGGATTGGATAGGAATCTAACTGGCTTGTAGTGTTAGTTTTGGTATGAAGTATGGATTTTTTGCCCTTGTCTTATTAGGACAGAACTTAGATACAAAACTTTTGATACTGTTCTCCAATCATAATTGGAGTTTTACGTTAATAATCTATGTCGACCTTTAATGCAAAACTTTATTACGCGGACTACTGAGGTGAAACTCCAATTTTGATTGGAGAAAAATGCCAAAATCATGCAAAGAATTGTATGGTTGACTCGGTTTGTGTGAGGTGCTGAACTGTGTTTTCTGCTCTTCCGTTTTCTTTTCCATGTTTTTTCAGGGTGTGCTCTTGGAATGGTTGTAGTGCTATGGAGTTTGTTTGTGTTGTTGCTTGGATTGGATAGCCATTTGAGTGAGGTGTCTGGATTACTTCCTCTTGGCTTGTTTTTATAATCTTGGTAAAGATGGTTCTGCATAGCTGGATTTCCAGCTCTCATATTCTTGTTAATTTCTTGCTGCTGCTTGGTTGTGGCATAACCTACGGGACTGACACTGATATCTTCTGCTTGAAAAGTATCAAAGAATCCCTTGAAGACCCCTATAATTATTTGAAGTTCTCTTGGGATTTCAACAACAAAACTGAAGGGTATATCTGCAGGTTTAATGGGGTTGAGTGTTGGCACCCTGACGAGAACAGGGTCTTGAATCTCAAACTGTCGAATATGGGACTCAAGGGCCAGTTTCCTCGTGGCATTCAAAATTGCTCGAGCTTAACTGGATTAGACCTTTCAATTAACAAACTCTCTGGAACCATTCCGGGAGACATATCCACTCTTATACCATTTGCGACGTCTATTGATCTATCTACAAATGAGTTTTCTGGGGCAATTCCCGTGAGTCTTGCGAATTGTACCTTTCTTAATACCCTTAAACTTGATCAGAATCGACTCACTGGCCAAATTCCTCCACAATTTGGTGTTCTCTCACGAATTAAGGTATTTTCTGTATCCAACAATCTTTTGACGGGGCAAGTTCCAATCTTTAGGGATGGGGTTGAGTTACATTATGCAAATAATCAAGGCCTATGTGGAGGAAATACATTGGCGCCTTGCCAAGCCACGCCTTCCAAGAGTAACATGGCTGTTATTGCTGGAGCTGCTGCTGGCGGGGTGACTCTTGCGGCATTAGGATTGGGTATTGGAATGTTCTTCTTTGTGCGACGTGTTTCTTTCAAGAAGAAGGAAGAGGATCCTGAAGGAAACAAATGGGCAAGAAGTCTAAAAGGAACTAAACGAATTAAGGTTTCTATGTTTGAGAAATCAATTTCAAAAATGAAATTGAGTGATCTCATGAAGGCTACTAACAACTTCAGTAATACCAATATCATTGGGACAGGAAGAACAGGAACTGTTTACAAAGCTGTCCTTGACGATGGCACAACTCTTATGGTTAAGAGATTACAGGAATCTCAGTACACTGAAAAAGAATTTATGTCTGAGATGGGTACGCTAGGTACTGTCAAACATCGCAATCTGGTTCCTCTTTTAGGTTTTTGTATGACCAAAAGGGAGAGGCTTTTGGTCTATAAAAACATGCCAAATGGCAACCTCCATGACCAACTCCATCCCGCTGATGGTGTGAGCACCCTTGACTGGACTACAAGGCTCAAAATTGCAATTGGAGCAGCCAAAGGGTTAGCATGGCTTCATCATAGCTGCAATCCCCGTATCATCCACCGAAACATAAGCTCGAAGTGCATCTTGTTGGATGCAGATTTTGAGCCAAAAATTTCTGATTTCGGCCTTGCTAGACTGATGAATCCAATTGATACTCATTTGAGTACTTTTGTAAATGGGGAGTTTGGAGATTTAGGTTATGTTGCTCCTGAGTACACAAGAACTTTGGTTGCTACACCTAAAGGGGATATTTACAGCTTTGGAACTGTTCTTCTTGAGTTGGTGACAGGTGAAAGACCTACCAATGTGTCTAAAGCTCCGGAAACTTTTAAAGGAAATCTGGTAGAATGGATTACGGAGCTCACAAGCAATGCAAAACTCCATGATGCCATTGATGAATCACTAGTCAGAAAGGATGTTGATAGTGAGCTTTTCCAATTTCTAAAGGTTGCATGCAACTGTGTCTCACCAACTCCAAAGGAGAGGCCCACCATGTTTGAAGTGTATCAGCTTTTAAGAGCTATTGGGGGTAGATACAATTTCACAACTGAGGATGATATATTGGTACCTACTGATATTGGTAATACTGATAACATGCAGGAACTTATTGTAGCCCAAGAAGGAAGTTATTGAAAGGTATGTTAGATATATAGGGTATAAATATAATTTATGTAATTGGTATTAAATTTTAATGTGTAATTATATATCTTACTTTGGTGTCCTAAAATAAATGTTAGTGGTAAATGTAGTTTTGAGGATCTAGATCCAGTTGTGTGCTATTGATATTGAAACATCAATATAAGATCATCAATCAAGGAGTAGATATAGTTGAGTTACTTCTTTCTAATCCTTATTTTGATCTGATTTCTTTGTTCTCTTCTCCCTCTTGCATGCTAATGTTTATAAACAATAGAAACTGTGTCAGTAGTTTTCATTGACCAATTATTCCAAAAGCTTAAGCTGTGAGGTGAAGACTTATGAATAGTTTTTTTTT
CDS Sequence
- >Glyma.16G079200.1
ATGGTTCTGCATAGCTGGATTTCCAGCTCTCATATTCTTGTTAATTTCTTGCTGCTGCTTGGTTGTGGCATAACCTACGGGACTGACACTGATATCTTCTGCTTGAAAAGTATCAAAGAATCCCTTGAAGACCCCTATAATTATTTGAAGTTCTCTTGGGATTTCAACAACAAAACTGAAGGGTATATCTGCAGGTTTAATGGGGTTGAGTGTTGGCACCCTGACGAGAACAGGGTCTTGAATCTCAAACTGTCGAATATGGGACTCAAGGGCCAGTTTCCTCGTGGCATTCAAAATTGCTCGAGCTTAACTGGATTAGACCTTTCAATTAACAAACTCTCTGGAACCATTCCGGGAGACATATCCACTCTTATACCATTTGCGACGTCTATTGATCTATCTACAAATGAGTTTTCTGGGGCAATTCCCGTGAGTCTTGCGAATTGTACCTTTCTTAATACCCTTAAACTTGATCAGAATCGACTCACTGGCCAAATTCCTCCACAATTTGGTGTTCTCTCACGAATTAAGGTATTTTCTGTATCCAACAATCTTTTGACGGGGCAAGTTCCAATCTTTAGGGATGGGGTTGAGTTACATTATGCAAATAATCAAGGCCTATGTGGAGGAAATACATTGGCGCCTTGCCAAGCCACGCCTTCCAAGAGTAACATGGCTGTTATTGCTGGAGCTGCTGCTGGCGGGGTGACTCTTGCGGCATTAGGATTGGGTATTGGAATGTTCTTCTTTGTGCGACGTGTTTCTTTCAAGAAGAAGGAAGAGGATCCTGAAGGAAACAAATGGGCAAGAAGTCTAAAAGGAACTAAACGAATTAAGGTTTCTATGTTTGAGAAATCAATTTCAAAAATGAAATTGAGTGATCTCATGAAGGCTACTAACAACTTCAGTAATACCAATATCATTGGGACAGGAAGAACAGGAACTGTTTACAAAGCTGTCCTTGACGATGGCACAACTCTTATGGTTAAGAGATTACAGGAATCTCAGTACACTGAAAAAGAATTTATGTCTGAGATGGGTACGCTAGGTACTGTCAAACATCGCAATCTGGTTCCTCTTTTAGGTTTTTGTATGACCAAAAGGGAGAGGCTTTTGGTCTATAAAAACATGCCAAATGGCAACCTCCATGACCAACTCCATCCCGCTGATGGTGTGAGCACCCTTGACTGGACTACAAGGCTCAAAATTGCAATTGGAGCAGCCAAAGGGTTAGCATGGCTTCATCATAGCTGCAATCCCCGTATCATCCACCGAAACATAAGCTCGAAGTGCATCTTGTTGGATGCAGATTTTGAGCCAAAAATTTCTGATTTCGGCCTTGCTAGACTGATGAATCCAATTGATACTCATTTGAGTACTTTTGTAAATGGGGAGTTTGGAGATTTAGGTTATGTTGCTCCTGAGTACACAAGAACTTTGGTTGCTACACCTAAAGGGGATATTTACAGCTTTGGAACTGTTCTTCTTGAGTTGGTGACAGGTGAAAGACCTACCAATGTGTCTAAAGCTCCGGAAACTTTTAAAGGAAATCTGGTAGAATGGATTACGGAGCTCACAAGCAATGCAAAACTCCATGATGCCATTGATGAATCACTAGTCAGAAAGGATGTTGATAGTGAGCTTTTCCAATTTCTAAAGGTTGCATGCAACTGTGTCTCACCAACTCCAAAGGAGAGGCCCACCATGTTTGAAGTGTATCAGCTTTTAAGAGCTATTGGGGGTAGATACAATTTCACAACTGAGGATGATATATTGGTACCTACTGATATTGGTAATACTGATAACATGCAGGAACTTATTGTAGCCCAAGAAGGAAGTTATTGA
Protein Sequence
- >Glyma.16G079200.1
MVLHSWISSSHILVNFLLLLGCGITYGTDTDIFCLKSIKESLEDPYNYLKFSWDFNNKTEGYICRFNGVECWHPDENRVLNLKLSNMGLKGQFPRGIQNCSSLTGLDLSINKLSGTIPGDISTLIPFATSIDLSTNEFSGAIPVSLANCTFLNTLKLDQNRLTGQIPPQFGVLSRIKVFSVSNNLLTGQVPIFRDGVELHYANNQGLCGGNTLAPCQATPSKSNMAVIAGAAAGGVTLAALGLGIGMFFFVRRVSFKKKEEDPEGNKWARSLKGTKRIKVSMFEKSISKMKLSDLMKATNNFSNTNIIGTGRTGTVYKAVLDDGTTLMVKRLQESQYTEKEFMSEMGTLGTVKHRNLVPLLGFCMTKRERLLVYKNMPNGNLHDQLHPADGVSTLDWTTRLKIAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTRTLVATPKGDIYSFGTVLLELVTGERPTNVSKAPETFKGNLVEWITELTSNAKLHDAIDESLVRKDVDSELFQFLKVACNCVSPTPKERPTMFEVYQLLRAIGGRYNFTTEDDILVPTDIGNTDNMQELIVAQEGSY*