Information report for GmHDA13
Gene Details
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Functional Descriptions
- Nuclear factor Y subunit GmNFYA competes with GmHDA13 for interaction with GmFVE to positively regulate salt tolerance in soybean.
- GmNFYA interacts with GmFVE, which functions with putative histone deacetylase GmHDA13 in a complex for transcriptional repression possibly by reducing H3K9 acetylation at target loci.
- Under salt stress, GmNFYA likely accumulates and competes with GmHDA13 for interaction with GmFVE, leading to the derepression and maintenance of histone acetylation for activation of salt-responsive genes and finally conferring salt tolerance in soybean plants.
- GmHDA13 associates with GmFVE to negatively regulate salt tolerance in soybean.
Functional Keywords
- stress , salt , tolerance , salt-tolerance , salt-stress , stress-tolerance
Literature and News
Gene Resources
- NCBI ID: 100796727
- UniProt accessions: A0A0R0H2W2
- EMBL: CM000845
- EnsemblPlants: KRH25182 , KRH25183
- Gramene: KRH25182 , KRH25183
- KEGG: gmx:100796727
- GO: GO:0004407 , GO:0005634 , GO:0031078 , GO:0032129 , GO:0034739 , GO:0040029 , GO:0046872 , GO:0140937 , GO:0180032 , GO:0180033 , GO:1990162
- OMA: GWLRAFH
- InterPro: IPR000286 , IPR003084 , IPR023696 , IPR023801 , IPR037138 , IPR050284
- PANTHER: PTHR10625 , PTHR10625:SF39
- SUPFAM: SSF52768
- Gene3D: 3.40.800.20
- OrthoDB: A0A0R0H2W2
- SMR: A0A0R0H2W2
Sequences
cDNA Sequence
- >Glyma.12G086700.1
ACTCTCCATGGAGAGTTTCTTTCACTCGTATCTTCAAGGAACCCGGTAATTAGCCCGAGGTAATTTTTCTGACACTTGTTTTGATTCTTACATATAAAAAATAAAATTAGGAAAGATTCAAAGAGAAAACCGAAGGAGCACATAGAGTGATTAGGCTGGTAGCAAGCGCGACATGGCACTGCAGTGCAGGTTAAGCTCACACCATTGATATCACTAGCCATATTCTCCTTTCGCTAATTCCCGCAAGCTACTACTCTTCTTCAACGCTCTCTCTGCAAAAGATGCGCTCCAAGGACAGAATCGCTTACTTCTACGACGGTGATGTCGGTAGTGTTTACTTTGGGGCGAAGCATCCGATGAAGCCCCACCGGCTTTGCATGACTCATCATCTTGTTCTCTCATACGATCTTCATAAGAAGATGGAGATTTATCGTCCACACAAGGCTTATCCTGTTGAGCTTGCCCAGTTTCATTCAGCTGATTATGTTGAGTTTTTGAACAGGATTACACCTGACACTCAGCACTTGTTCTTGAATGAACTGACAAAATATAATCTTGGAGAAGACTGCCCTGTATTTGACAACTTATTTGAATTTTGTCAGATTTATGCTGGTGGAACTATAGATGCTGCACGTCGATTAAACAATCAACTGTGTGATATTGCTATCAACTGGGCCGGTGGACTACATCATGCCAAGAAATGCGAGGCATCTGGATTTTGTTACATCAATGACTTGGTTTTAGGAATCTTGGAGCTTCTTAAATATCATGCTCGTGTTTTGTATATTGATATAGATGTGCACCATGGTGATGGTGTAGAAGAAGCCTTCTACTTCACTGACAGGGTGATGACTGTCAGTTTTCACAAGTATGGAGATTCGTTCTTCCCGGGTACTGGCGATGCTAAGGAAATAGGAGAAAGAGAAGGAAAGTTTTATGCCATAAATGTCCCATTGAAGGATGGAATAGATGACAGTAGCTTCACTCGACTTTTCAAGACTATTATTTCCAAAGTAGTTGAAACATATCAACCTGGTGCAATAGTTCTGCAGTGTGGAGCAGATTCGCTTGCTGGAGATCGCTTGGGTTGCTTCAATCTCTCTATTGATGGTCATGCTGAATGTGTTAGCTTCGTAAAGAGATTCAATTTGCCATTGCTGGTCACTGGAGGTGGGGGATACACAAAAGAAAATGTTGCTCGATGTTGGACTGTTGAAACAGGAGTTCTTCTAGATACAGAGCTTCCAAATGAGATTCCGCAAAATGATTATATTAAATACTTTGCACCAGAATTTTCTTTGAAGGTTCCAAATGGGCCGATAGAAAATTTGAATAGTAAATCATATCTTAGCACCATTAAAATGCAAGTCTTGGAAAATCTTCGTTGCATCCAGCATGCTCCAAGCGTACAGATGCAGGAGGTCCCTCCTGACTTCTACATTCCAGAATTCGATGAAGATGAGCAGAACCCTGATGAACGCATTGATCAGCACACTCAAGACAAGCACATCCAGCGCGATGATGAATATTATGATGGTGACAATGACAATGATCAAATGAATATTTCATGAAGTGCAGTTGCCGTTTGCCTTTTGGCGGGGGATTGACCGTTTTAAGAGAGAAGGAAAATGTTAATTAGACAAACACCTAGATGTATCAACAAAGCGGTAGTACTAGCCCAAGAAACTTGTATATTTATAAGATTTTTATTGTTTTCAGTTGCTAATATATTTGCTCAAAGTTACATTATTAATGATGTTTCTTCCCTGTCATTTTTTTGAATGAAAATGGACGGTGTTAGAGCAACTCTGACAACAAGAGCTTGCATAACATTCTTTT
CDS Sequence
- >Glyma.12G086700.1
ATGCGCTCCAAGGACAGAATCGCTTACTTCTACGACGGTGATGTCGGTAGTGTTTACTTTGGGGCGAAGCATCCGATGAAGCCCCACCGGCTTTGCATGACTCATCATCTTGTTCTCTCATACGATCTTCATAAGAAGATGGAGATTTATCGTCCACACAAGGCTTATCCTGTTGAGCTTGCCCAGTTTCATTCAGCTGATTATGTTGAGTTTTTGAACAGGATTACACCTGACACTCAGCACTTGTTCTTGAATGAACTGACAAAATATAATCTTGGAGAAGACTGCCCTGTATTTGACAACTTATTTGAATTTTGTCAGATTTATGCTGGTGGAACTATAGATGCTGCACGTCGATTAAACAATCAACTGTGTGATATTGCTATCAACTGGGCCGGTGGACTACATCATGCCAAGAAATGCGAGGCATCTGGATTTTGTTACATCAATGACTTGGTTTTAGGAATCTTGGAGCTTCTTAAATATCATGCTCGTGTTTTGTATATTGATATAGATGTGCACCATGGTGATGGTGTAGAAGAAGCCTTCTACTTCACTGACAGGGTGATGACTGTCAGTTTTCACAAGTATGGAGATTCGTTCTTCCCGGGTACTGGCGATGCTAAGGAAATAGGAGAAAGAGAAGGAAAGTTTTATGCCATAAATGTCCCATTGAAGGATGGAATAGATGACAGTAGCTTCACTCGACTTTTCAAGACTATTATTTCCAAAGTAGTTGAAACATATCAACCTGGTGCAATAGTTCTGCAGTGTGGAGCAGATTCGCTTGCTGGAGATCGCTTGGGTTGCTTCAATCTCTCTATTGATGGTCATGCTGAATGTGTTAGCTTCGTAAAGAGATTCAATTTGCCATTGCTGGTCACTGGAGGTGGGGGATACACAAAAGAAAATGTTGCTCGATGTTGGACTGTTGAAACAGGAGTTCTTCTAGATACAGAGCTTCCAAATGAGATTCCGCAAAATGATTATATTAAATACTTTGCACCAGAATTTTCTTTGAAGGTTCCAAATGGGCCGATAGAAAATTTGAATAGTAAATCATATCTTAGCACCATTAAAATGCAAGTCTTGGAAAATCTTCGTTGCATCCAGCATGCTCCAAGCGTACAGATGCAGGAGGTCCCTCCTGACTTCTACATTCCAGAATTCGATGAAGATGAGCAGAACCCTGATGAACGCATTGATCAGCACACTCAAGACAAGCACATCCAGCGCGATGATGAATATTATGATGGTGACAATGACAATGATCAAATGAATATTTCATGA
Protein Sequence
- >Glyma.12G086700.1
MRSKDRIAYFYDGDVGSVYFGAKHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLNRITPDTQHLFLNELTKYNLGEDCPVFDNLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKYGDSFFPGTGDAKEIGEREGKFYAINVPLKDGIDDSSFTRLFKTIISKVVETYQPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVSFVKRFNLPLLVTGGGGYTKENVARCWTVETGVLLDTELPNEIPQNDYIKYFAPEFSLKVPNGPIENLNSKSYLSTIKMQVLENLRCIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERIDQHTQDKHIQRDDEYYDGDNDNDQMNIS*