Gene Details:
- Gene ID: Glyma.12G086700
- Gene Symbol: GmHDA13
- Gene Name:
- Genome: Wm82.a4.v1
- Species: Glycine max
Functional Descriptions:
- Nuclear factor Y subunit GmNFYA competes with GmHDA13 for interaction with GmFVE to positively regulate salt tolerance in soybean.
- GmNFYA interacts with GmFVE, which functions with putative histone deacetylase GmHDA13 in a complex for transcriptional repression possibly by reducing H3K9 acetylation at target loci.
- Under salt stress, GmNFYA likely accumulates and competes with GmHDA13 for interaction with GmFVE, leading to the derepression and maintenance of histone acetylation for activation of salt-responsive genes and finally conferring salt tolerance in soybean plants.
- GmHDA13 associates with GmFVE to negatively regulate salt tolerance in soybean.
Function-related keywords:
- stress , salt , tolerance , salt-tolerance , salt-stress , stress-tolerance
Literature:
- Nuclear factor Y subunit GmNFYA competes with GmHDA13 for interaction with GmFVE to positively regulate salt tolerance in soybean. DOI: 10.1111/pbi.13668 ; PMID: 34265872
Related News:
Gene Resources:
- NCBI ID: 100796727
- UniProt accessions: A0A0R0H2W2
Orthologs:
Sequences:
cDNA Sequence
- >Glyma.12G086700.1
ACTCTCCATGGAGAGTTTCTTTCACTCGTATCTTCAAGGAACCCGGTAATTAGCCCGAGGTAATTTTTCTGACACTTGTTTTGATTCTTACATATAAAAAATAAAATTAGGAAAGATTCAAAGAGAAAACCGAAGGAGCACATAGAGTGATTAGGCTGGTAGCAAGCGCGACATGGCACTGCAGTGCAGGTTAAGCTCACACCATTGATATCACTAGCCATATTCTCCTTTCGCTAATTCCCGCAAGCTACTACTCTTCTTCAACGCTCTCTCTGCAAAAGATGCGCTCCAAGGACAGAATCGCTTACTTCTACGACGGTGATGTCGGTAGTGTTTACTTTGGGGCGAAGCATCCGATGAAGCCCCACCGGCTTTGCATGACTCATCATCTTGTTCTCTCATACGATCTTCATAAGAAGATGGAGATTTATCGTCCACACAAGGCTTATCCTGTTGAGCTTGCCCAGTTTCATTCAGCTGATTATGTTGAGTTTTTGAACAGGATTACACCTGACACTCAGCACTTGTTCTTGAATGAACTGACAAAATATAATCTTGGAGAAGACTGCCCTGTATTTGACAACTTATTTGAATTTTGTCAGATTTATGCTGGTGGAACTATAGATGCTGCACGTCGATTAAACAATCAACTGTGTGATATTGCTATCAACTGGGCCGGTGGACTACATCATGCCAAGAAATGCGAGGCATCTGGATTTTGTTACATCAATGACTTGGTTTTAGGAATCTTGGAGCTTCTTAAATATCATGCTCGTGTTTTGTATATTGATATAGATGTGCACCATGGTGATGGTGTAGAAGAAGCCTTCTACTTCACTGACAGGGTGATGACTGTCAGTTTTCACAAGTATGGAGATTCGTTCTTCCCGGGTACTGGCGATGCTAAGGAAATAGGAGAAAGAGAAGGAAAGTTTTATGCCATAAATGTCCCATTGAAGGATGGAATAGATGACAGTAGCTTCACTCGACTTTTCAAGACTATTATTTCCAAAGTAGTTGAAACATATCAACCTGGTGCAATAGTTCTGCAGTGTGGAGCAGATTCGCTTGCTGGAGATCGCTTGGGTTGCTTCAATCTCTCTATTGATGGTCATGCTGAATGTGTTAGCTTCGTAAAGAGATTCAATTTGCCATTGCTGGTCACTGGAGGTGGGGGATACACAAAAGAAAATGTTGCTCGATGTTGGACTGTTGAAACAGGAGTTCTTCTAGATACAGAGCTTCCAAATGAGATTCCGCAAAATGATTATATTAAATACTTTGCACCAGAATTTTCTTTGAAGGTTCCAAATGGGCCGATAGAAAATTTGAATAGTAAATCATATCTTAGCACCATTAAAATGCAAGTCTTGGAAAATCTTCGTTGCATCCAGCATGCTCCAAGCGTACAGATGCAGGAGGTCCCTCCTGACTTCTACATTCCAGAATTCGATGAAGATGAGCAGAACCCTGATGAACGCATTGATCAGCACACTCAAGACAAGCACATCCAGCGCGATGATGAATATTATGATGGTGACAATGACAATGATCAAATGAATATTTCATGAAGTGCAGTTGCCGTTTGCCTTTTGGCGGGGGATTGACCGTTTTAAGAGAGAAGGAAAATGTTAATTAGACAAACACCTAGATGTATCAACAAAGCGGTAGTACTAGCCCAAGAAACTTGTATATTTATAAGATTTTTATTGTTTTCAGTTGCTAATATATTTGCTCAAAGTTACATTATTAATGATGTTTCTTCCCTGTCATTTTTTTGAATGAAAATGGACGGTGTTAGAGCAACTCTGACAACAAGAGCTTGCATAACATTCTTTT
CDS Sequence
- >Glyma.12G086700.1
ATGCGCTCCAAGGACAGAATCGCTTACTTCTACGACGGTGATGTCGGTAGTGTTTACTTTGGGGCGAAGCATCCGATGAAGCCCCACCGGCTTTGCATGACTCATCATCTTGTTCTCTCATACGATCTTCATAAGAAGATGGAGATTTATCGTCCACACAAGGCTTATCCTGTTGAGCTTGCCCAGTTTCATTCAGCTGATTATGTTGAGTTTTTGAACAGGATTACACCTGACACTCAGCACTTGTTCTTGAATGAACTGACAAAATATAATCTTGGAGAAGACTGCCCTGTATTTGACAACTTATTTGAATTTTGTCAGATTTATGCTGGTGGAACTATAGATGCTGCACGTCGATTAAACAATCAACTGTGTGATATTGCTATCAACTGGGCCGGTGGACTACATCATGCCAAGAAATGCGAGGCATCTGGATTTTGTTACATCAATGACTTGGTTTTAGGAATCTTGGAGCTTCTTAAATATCATGCTCGTGTTTTGTATATTGATATAGATGTGCACCATGGTGATGGTGTAGAAGAAGCCTTCTACTTCACTGACAGGGTGATGACTGTCAGTTTTCACAAGTATGGAGATTCGTTCTTCCCGGGTACTGGCGATGCTAAGGAAATAGGAGAAAGAGAAGGAAAGTTTTATGCCATAAATGTCCCATTGAAGGATGGAATAGATGACAGTAGCTTCACTCGACTTTTCAAGACTATTATTTCCAAAGTAGTTGAAACATATCAACCTGGTGCAATAGTTCTGCAGTGTGGAGCAGATTCGCTTGCTGGAGATCGCTTGGGTTGCTTCAATCTCTCTATTGATGGTCATGCTGAATGTGTTAGCTTCGTAAAGAGATTCAATTTGCCATTGCTGGTCACTGGAGGTGGGGGATACACAAAAGAAAATGTTGCTCGATGTTGGACTGTTGAAACAGGAGTTCTTCTAGATACAGAGCTTCCAAATGAGATTCCGCAAAATGATTATATTAAATACTTTGCACCAGAATTTTCTTTGAAGGTTCCAAATGGGCCGATAGAAAATTTGAATAGTAAATCATATCTTAGCACCATTAAAATGCAAGTCTTGGAAAATCTTCGTTGCATCCAGCATGCTCCAAGCGTACAGATGCAGGAGGTCCCTCCTGACTTCTACATTCCAGAATTCGATGAAGATGAGCAGAACCCTGATGAACGCATTGATCAGCACACTCAAGACAAGCACATCCAGCGCGATGATGAATATTATGATGGTGACAATGACAATGATCAAATGAATATTTCATGA
Protein Sequence
- >Glyma.12G086700.1
MRSKDRIAYFYDGDVGSVYFGAKHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLNRITPDTQHLFLNELTKYNLGEDCPVFDNLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKYGDSFFPGTGDAKEIGEREGKFYAINVPLKDGIDDSSFTRLFKTIISKVVETYQPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVSFVKRFNLPLLVTGGGGYTKENVARCWTVETGVLLDTELPNEIPQNDYIKYFAPEFSLKVPNGPIENLNSKSYLSTIKMQVLENLRCIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERIDQHTQDKHIQRDDEYYDGDNDNDQMNIS*