Gene Details:
- Gene ID: Csa_5G171710
- Gene Symbol: CsSh5.1
- Gene Name: xyloglucan galactosyltransferase
- Genome: Cucumis sativus ASM407v2
- Species: Cucumis sativus
Functional Descriptions:
- Mapping and identification of CsSh5.1, a gene encoding a xyloglucan galactosyltransferase required for hypocotyl elongation in cucumber.
- CsSh5.1, which controls hypocotyl elongation under high temperature conditions in cucumber, was mapped to a 57.1 kb region on chromosome 5 containing a candidate gene encoding a xyloglucan galactosyltransferase.
- Natural variations in CsSh5.1 related to hypocotyl elongation.
Function-related keywords:
Literature:
- Mapping and identification of CsSh5.1, a gene encoding a xyloglucan galactosyltransferase required for hypocotyl elongation in cucumber (Cucumis sativus L.). DOI: 10.1007/s00122-020-03754-2 ; PMID: 33558986
Related News:
Gene Resources:
- NCBI ID: 105435453
- UniProt accessions: A0A0A0KNB0
Orthologs:
Sequences:
cDNA Sequence
- >Csa_5G171710
CCGTATTTGATTAAGTTTACCAATATTACCCTCCTCGCCGCTTAGAAATATCAAACGGAGAAGTCCACGGAATCCTCGCATTGTTGTTTACAAAATTTGTTGCTTTACCATCAACGTTCTGGCAACCATGATAAAACGAAAACCGGCACTTGCCGGTCTACAATAACTTAATACGCTGTCGGTTGCTCTTTCACCCGGTAACAAAACTCGACACGTGTCATCTCCCTTTTCCTAATAAAATTTCGGCCCTTCATCTTTTCCACCACAACTCACCCCCTCTTCTCTTCCTCACTCTAAAACCACCACCCAATTCTCCCCTGGCGGTGACGGCTGACGACGCCCACGGTCACAGTCACCACATTTTCTATACCTAATTTATTTTTATTTTACTCTGATGCTTCCTCTTTCGGGTAACTCCTCGCCCGCCGAGCACCATCCGAAGAAATTCAAAGCATCCTCTGAGTTTTTCGATAGGAAGAATTCCTTCAACTCCTTGTTACAGCAGTTTCATCATCAACAATCTCGGTTATGGCTTCTACTTGTAATCCTCTTCCTTCAGATCCTCCTCCTCTTCACCATCCGCTATCTCCCTCTTCCTCTCCCACCAGCGCTTTCCTCCTCCACTAACCAACAACTCCACCGCTTCCCTTCCGTCGCCGTCTCCCCCGCCGACATTGACGGCGGAAATTGCAAAAACGGCAGGATCTTCGTTTACGATTTGCCGAAGCTGTTTAACCAAGACATTCTCGAAAACTGTGATAATCTGAATCCATGGAGCTCGAGCTGTAGCGCGATGGCAAACGGTGGATTCGGCCAGAAAGCGGATTCCTTGGCCGGGATTATACCGGAGAATCTTCTTCAGTCGTGGTATTGGACGGACCAATTCGTAACGGAGATTATTTTCCATAATCGGATTTTGAAGCATAAATGCCGTGTTTTAGAGCCGGAATCAGCTACGGCGTTTTATGTACCGTTTTACGCTGGACTCGCAGTGGGGAAATTCCTCTGGACGAATTCAACCCCGGAGGAACGGGATCAGCATTGCCGTTCGATTCTGAAATGGCTATCCGATCAAGAGTATTACAAAAGATCCAACGGCTGGGATCATTTCATTACAATGGGACGTATCACATGGGATTTCCGGAGGAGTAAGGATAAAGATTGGGGATCGGGTTGTATTTATTTACCCGGTATGAGAAATATAACCCGACTTTTGATAGAGCGAAATCCATGGGATTATTTTGACGTCGGTGTACCTTACCCCACAGGATTCCACCCCAAATCCCTAAACGACATATCGGCTTGGCAGGAGTTTATACGCACGCGCCGTCGTACTCACCTCTTCTGTTTCGCCGGAGCCACCCGCGCCGCTTTCCACAATGACTTCCGAGCGATGCTTCTCCACCAGTGCAAGAACTCCACCGGAGAGAAATGCCGCGTTGTCGATTGCGCTGGCAGCCGTTGCTCTAACGGCACGTCAGCGATTCTGGAGACATTTCTCACCTCAGACTTCTGCCTTCAGCCGAGAGGAGACAGCTTCACGAGGCGGTCCATCTTCGACTGCATGGTGGCCGGAGCGATTCCGGTTTTCTTTTGGCGACGAACGGCGTATTATCAGTACGAGTGGTTCTTACCGGGCGAACCGGAAAGTTACTCGGTTTTTATAGACCGGAACGCGGTGAAGAACGGGACAACCTCCATTGAAGCGGTTCTGGAGAGGTTCAGTAGAGAGGAAGTGAAGGAGATGAGAGAGAGAGTGATCGAGTCAATTCCGAAGTTCATTTACGGCACCGGCGAAGTTAGAGACGCGTTGGACGTGGCCGTTGAAGGGGTTTTGAGGAGGTTTAAAGAGCAAGAAGAATGGGAATACAAGTGGAAATAAGGTAGAGTGTGAGGGCAGAAATGCAAATGAAGAAGAGAAAAGGGAAATTGGAAAAGCTTTTTAGTTTTTCTTTTTTTAATTTTTTTAATGCTATTAGTATATATAGTTAGGAATAATGATAATAACAATAATAATAATAATATACGATTCTTTTGGTATGAAGGTTGTAAACTATAGGGGAATAAAATTTTGGAGTGTAATTTTATTTGAGGGGCTTTAAAGTTAAAAAAAGTGGGGGTAGGGGTAAAATTGCAAAAAAGAGAAAAAGGGGAAAAGGGAATTTTGGGGATAAAGTTGTAGAAGGGCCCAGAAGTTGGGTTGTTTTTGGCATAATGGAAAATTGGATTTATTATGTATACTAAAAAGTTATGTGGTGTTAATTTGATAAGAAAATGAAATAGTGTCTTGGTTTTCATAATGATTATAGTGGA
CDS Sequence
- >Csa_5G171710
ATGCTTCCTCTTTCGGGTAACTCCTCGCCCGCCGAGCACCATCCGAAGAAATTCAAAGCATCCTCTGAGTTTTTCGATAGGAAGAATTCCTTCAACTCCTTGTTACAGCAGTTTCATCATCAACAATCTCGGTTATGGCTTCTACTTGTAATCCTCTTCCTTCAGATCCTCCTCCTCTTCACCATCCGCTATCTCCCTCTTCCTCTCCCACCAGCGCTTTCCTCCTCCACTAACCAACAACTCCACCGCTTCCCTTCCGTCGCCGTCTCCCCCGCCGACATTGACGGCGGAAATTGCAAAAACGGCAGGATCTTCGTTTACGATTTGCCGAAGCTGTTTAACCAAGACATTCTCGAAAACTGTGATAATCTGAATCCATGGAGCTCGAGCTGTAGCGCGATGGCAAACGGTGGATTCGGCCAGAAAGCGGATTCCTTGGCCGGGATTATACCGGAGAATCTTCTTCAGTCGTGGTATTGGACGGACCAATTCGTAACGGAGATTATTTTCCATAATCGGATTTTGAAGCATAAATGCCGTGTTTTAGAGCCGGAATCAGCTACGGCGTTTTATGTACCGTTTTACGCTGGACTCGCAGTGGGGAAATTCCTCTGGACGAATTCAACCCCGGAGGAACGGGATCAGCATTGCCGTTCGATTCTGAAATGGCTATCCGATCAAGAGTATTACAAAAGATCCAACGGCTGGGATCATTTCATTACAATGGGACGTATCACATGGGATTTCCGGAGGAGTAAGGATAAAGATTGGGGATCGGGTTGTATTTATTTACCCGGTATGAGAAATATAACCCGACTTTTGATAGAGCGAAATCCATGGGATTATTTTGACGTCGGTGTACCTTACCCCACAGGATTCCACCCCAAATCCCTAAACGACATATCGGCTTGGCAGGAGTTTATACGCACGCGCCGTCGTACTCACCTCTTCTGTTTCGCCGGAGCCACCCGCGCCGCTTTCCACAATGACTTCCGAGCGATGCTTCTCCACCAGTGCAAGAACTCCACCGGAGAGAAATGCCGCGTTGTCGATTGCGCTGGCAGCCGTTGCTCTAACGGCACGTCAGCGATTCTGGAGACATTTCTCACCTCAGACTTCTGCCTTCAGCCGAGAGGAGACAGCTTCACGAGGCGGTCCATCTTCGACTGCATGGTGGCCGGAGCGATTCCGGTTTTCTTTTGGCGACGAACGGCGTATTATCAGTACGAGTGGTTCTTACCGGGCGAACCGGAAAGTTACTCGGTTTTTATAGACCGGAACGCGGTGAAGAACGGGACAACCTCCATTGAAGCGGTTCTGGAGAGGTTCAGTAGAGAGGAAGTGAAGGAGATGAGAGAGAGAGTGATCGAGTCAATTCCGAAGTTCATTTACGGCACCGGCGAAGTTAGAGACGCGTTGGACGTGGCCGTTGAAGGGGTTTTGAGGAGGTTTAAAGAGCAAGAAGAATGGGAATACAAGTGGAAATAA
Protein Sequence
- >Csa_5G171710
MLPLSGNSSPAEHHPKKFKASSEFFDRKNSFNSLLQQFHHQQSRLWLLLVILFLQILLLFTIRYLPLPLPPALSSSTNQQLHRFPSVAVSPADIDGGNCKNGRIFVYDLPKLFNQDILENCDNLNPWSSSCSAMANGGFGQKADSLAGIIPENLLQSWYWTDQFVTEIIFHNRILKHKCRVLEPESATAFYVPFYAGLAVGKFLWTNSTPEERDQHCRSILKWLSDQEYYKRSNGWDHFITMGRITWDFRRSKDKDWGSGCIYLPGMRNITRLLIERNPWDYFDVGVPYPTGFHPKSLNDISAWQEFIRTRRRTHLFCFAGATRAAFHNDFRAMLLHQCKNSTGEKCRVVDCAGSRCSNGTSAILETFLTSDFCLQPRGDSFTRRSIFDCMVAGAIPVFFWRRTAYYQYEWFLPGEPESYSVFIDRNAVKNGTTSIEAVLERFSREEVKEMRERVIESIPKFIYGTGEVRDALDVAVEGVLRRFKEQEEWEYKWK