Information report for CsRDR1a
Gene Details
|
|
Functional Descriptions
- The expression of all four CsRDR1 genes was induced by virus infection, after which the expression level of CsRDR1b increased 10–20-fold in several virus-resistant cucumber cultivars and in a broad virus-resistant transgenic cucumber line expressing a high level of transgene small RNAs, all without alteration in salicylic acid (SA) levels.
- A constitutive high level of CsRDR1b gene expression independent of SA was found to be associated with broad virus resistance.
- Multiple CsRDR1 genes are involved in virus resistance in cucumber and are regulated in a coordinated fashion with different expression profiles. These CsRDR1 genes may have either distinct or overlapping functions.
- These findings show that multiple CsRDR1 genes are involved in virus resistance in cucumber and are regulated in a coordinated fashion with different expression profiles.
Functional Keywords
- resistance , salicylic-acid , resistant , sa , virus
Literature and News
Gene Resources
- NCBI ID: 101206705
- UniProt accessions: A0A0A0KSM9
Sequences
cDNA Sequence
- >Csa_5G239140
ATGGGGAAAACAATTCACATTAGTGGATTTCCTTCACATGTCACCGCAGATGCTGTTAAGAATTTTTTGGAGGGTCATACAGGTCCAGGTACTGTGTATGCCATAAAGGTTAGACCACCTAAGAGAGGGGGAGGTAGACTATATGCTATTGTTCAATTCACTAGTGCTACACAAGCTGAGTTGATCATTTCTTTAGCTAATCAACGTCTATGGTACGGATCTTCTTATCTTAAGGCTCGGGCAACCGAGGTTGATATTGTACCAAAACCTAGGACATACATGTATACCTTGGAAGAGTTGCTGCTATGCTTTGGTTGTCAAGTCTCAACTGAAAAGTTTCGTGTTCTATGGGAAGGAAATGTTGATTTGGTGACTTTTGGAATTGGAATGCGGAAAATGAACTTTCATTTGAAATATAAGTCTGTTGAGTATAGGCTTGAGCTTTCATATGAGATCATTTGGCAGATACAACTGCACTGTCCGCGAGATCAGTCTATGAAGTATCTTCTGATCCAGTTAAGTGGAGCTCCTCGGATATATAAAAAAGTTGCACCGAATAGTGGACAAATCTTCGACAATCCACTTTTGAACTTTTTTAAGGAAGCATCTGATGATCAATGGGTTAGAACGACTGATTTTACTTCATCATGCTCTATTGGACAATCTTCTTCTTTATGTTTGAAGCTACCTAATGGCCGTCAACTTCCACCTTTTAAACAAAATTTTGCTTATTATGAAGAATTTGAACATGAATTCCGCTTGATAGATGAAGATGCCAATTTTTCTTTTTGTAGAGATCTTGCTCCCATTGTTGATTCTCGTTCTCATGTTCTGCCGTATAAAATTTTGTTTAAAATAAATGCATTAGTTCAATATGGTTGCATTCCATGGCCATTACTTGATGCTAGTTTCTACCGGTTGGTCGAAAGAATAATAACAACAAGAATTGAATTTGTTGAACATGCCTTGGAAAAACTGTTCCATTTAAAGGAATGCAACTATGATCCATCAAACTTTCTTACAGAGCAGTACAGAAAGTATTCAAGACATCCTCCAAATTCTCCTGTTATATCCTTGGATGATGGTTTGGTATATGTTCGTAGGGTTCAAATAACACCTTGTAAGGTGTTCTTCTGTGGTCCTGAAGTCAATGTCTCAAATCGGGTGTTGCGCCATTTTTCTCAATATATTGATAATTTTCTTCGTGTGTCTTTTGTTGATGAGGAGTGGGATAAAATGCGTTCAACAGATTTATTGCCACGGATGTCTTCAAAGAGTGAGGATGGTAAAACTGATATCTACAGGAGAATTCTCTCTGTTCTTAAAAATGGCATAGTCATAGGTGATAAAACCTTTCAGTTTCTTGCATTCTCATCAAGCCAATTAAGAGATAATTCCTTGTGGATGTTTGCTTCCGGACCTGATATTGACGCAGCTTATATTAGAGCGTGGATGGGCGATTTTCGACATATCAAGAATCCCGCAAAGTATGCTGCTAGATTGGGCCAATCATTCGGCTCATCGACAGAGGCACTTTCAGTTGCTAGTAATGAAAGGGAAATTATTCCTGACATAGAGGTTCAACAGGGAGAAATCAAGTATGTCTTTTCTGATGGAATTGGAAAAATATCAAGCAAATTCGCCAAAGAGGTTGCTGCAAAATGTGGTTTCCAAGCCGTCCCGTCTGCTTTTCAAATTCGTTATGGTGGATATAAGGGTGTTGTTGCTGTTGATCCGTACTCAACTATAAAATTATCTCTGAGGAAGAGTATGTGCAAATTTGAATCAGACAACACAAAACTTGACGTCTTAGGCCATAGCAAATACCAACCATGCTTCCTTAATCGTCAACTGATTACTCTCATGTCTACTCTAGGTGTTAGAGACGAAATTTTTGAGAAAAAACAAAGTGAAGCTGTAGAACAATTGGATGCCATTTTAACAGATCCATTGAAGGCTCAAGAAGCTTTGGAGTTGATGTCTCCCGGAGAGAATACTAATATTCTCAAGGAAATGCTCAAATGTGGCTATCAACCAGATGTCGAGCCGTATCTGTCAATGATGTTACAAACTTTCCGGGCATCAAAGTTGCTAGAGTTACGCACCAAATCAAGAATCTTTATCCCAAATGGGAGAGCGATGATGGGATGTCTTGATGAGACCAGGACCTTGGAATATGGGCAGGTATTTGTGCAAATCTCCAGTGGTAGACATCGAAATTTATCTGAATCCTTCGCATTCAATAGAATTGGTCGAGAACACCATTTAGTTATTGAAGGAAATGTTACAGTTGCTAAAAATCCCTGCCTGCACCCTGGTGATGTTCGTGTATTAAAGGCTGTAAATATACCTGGTTTGTACCATATGGTTGACTGTGTAGTTTTTCCTCAAAAAGGATCAAGGCCTCATCCGAATGAATGCTCAGGTAGTGATTTAGATGGTGATATTTACTTTGTCTGTTGGGACACCGAATTGATCCCGTCTCGACAAATTCCACCTATGGATTATACTCCTGCACCTCCAAATGAGTTAGATCGTGATGTTACAACTGAGGATATCCAAGAATATTTTGTGAACTACATGGTTAATGATAGTCTTGGAATCATTGCCAATGCTCATACTGCCTTTGCAGATAAAGAGCTCTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCTTTGCAGATAAAGAGCTCTTTAAAGCAAGGAGTAGTCCTTGTTTGGAGCTTGCAAAGCTATTCTCCGTTGCTGTGGACTTCCCAAAAACTGGAGTACCAGCTATAATACCTTCTCATTTATATGTCAAAGAGTTTCCTGACTTTATGGAGAAGCCTGACCGACCCTCTTATGAATCAAACAAAGTAATTGGAAAACTTTTTCGGGCTGTGAAAGACATTGCACCAACTTTAAGCCATATTCGGTCATTTACTCGAGATGTAGCAAGAAGGTGTTACGACTGTGATATGGAAGTCGAAGGCTTTGAAGATTATGTTGAAGATGCCTTCTATCATAAAAGCAATTATGATTACAAGTTGGGGAATTTGCTTGATTATTATGGTATCAAGTCTGAGGCAGAAGTACTTAGTGGGAGTATCATGAGGATGTCCAAGTCTTTCACCAGGAGAAGAGATGCAGAAGCAATCAACTTGGCTGTAAGGTCTCTGAGAAAGGAGGCTAGGACATGGTTCAATGCAAGAGAAGGCGCAGATTCGAATTCAGATGATTTATTTGCCAAAGCTTCAGCTTGGTACTATGTTACATACCATCACTCTTATTGGGGCTGCTATAATGAGGGAATGAAACGCGACCATTATTTGAGCTTCCCCTGGTGTGTTTACGACAAACTGATGCAAATCAAGGAGAATAATTTGAGAAGAAGAGAGAGAGCTGCAAGACTGGCAAGTTTCGACAGATTCGGACATGTGTTAAATCTTGGTGGGAGTTGAAGAATGATCAATATGGTTGGTTTGCTGTCAGATTGAACTAAATTTTTCTGTAGCTTTAAATGATTGAACTAAGAGAGGAAACTTGAAATGGAAATTGTCTTTTAACTCGTTGAAAACTTGTTAGTTTATAAGGAATGTTGTTTCTGTTTACCGTGTAATATCCACATTCGCATGTACAGAGTTCATGAAATCTCAAACCTTAGTCTCACTTTCTCT
CDS Sequence
- >Csa_5G239140
ATGGGGAAAACAATTCACATTAGTGGATTTCCTTCACATGTCACCGCAGATGCTGTTAAGAATTTTTTGGAGGGTCATACAGGTCCAGGTACTGTGTATGCCATAAAGGTTAGACCACCTAAGAGAGGGGGAGGTAGACTATATGCTATTGTTCAATTCACTAGTGCTACACAAGCTGAGTTGATCATTTCTTTAGCTAATCAACGTCTATGGTACGGATCTTCTTATCTTAAGGCTCGGGCAACCGAGGTTGATATTGTACCAAAACCTAGGACATACATGTATACCTTGGAAGAGTTGCTGCTATGCTTTGGTTGTCAAGTCTCAACTGAAAAGTTTCGTGTTCTATGGGAAGGAAATGTTGATTTGGTGACTTTTGGAATTGGAATGCGGAAAATGAACTTTCATTTGAAATATAAGTCTGTTGAGTATAGGCTTGAGCTTTCATATGAGATCATTTGGCAGATACAACTGCACTGTCCGCGAGATCAGTCTATGAAGTATCTTCTGATCCAGTTAAGTGGAGCTCCTCGGATATATAAAAAAGTTGCACCGAATAGTGGACAAATCTTCGACAATCCACTTTTGAACTTTTTTAAGGAAGCATCTGATGATCAATGGGTTAGAACGACTGATTTTACTTCATCATGCTCTATTGGACAATCTTCTTCTTTATGTTTGAAGCTACCTAATGGCCGTCAACTTCCACCTTTTAAACAAAATTTTGCTTATTATGAAGAATTTGAACATGAATTCCGCTTGATAGATGAAGATGCCAATTTTTCTTTTTGTAGAGATCTTGCTCCCATTGTTGATTCTCGTTCTCATGTTCTGCCGTATAAAATTTTGTTTAAAATAAATGCATTAGTTCAATATGGTTGCATTCCATGGCCATTACTTGATGCTAGTTTCTACCGGTTGGTCGAAAGAATAATAACAACAAGAATTGAATTTGTTGAACATGCCTTGGAAAAACTGTTCCATTTAAAGGAATGCAACTATGATCCATCAAACTTTCTTACAGAGCAGTACAGAAAGTATTCAAGACATCCTCCAAATTCTCCTGTTATATCCTTGGATGATGGTTTGGTATATGTTCGTAGGGTTCAAATAACACCTTGTAAGGTGTTCTTCTGTGGTCCTGAAGTCAATGTCTCAAATCGGGTGTTGCGCCATTTTTCTCAATATATTGATAATTTTCTTCGTGTGTCTTTTGTTGATGAGGAGTGGGATAAAATGCGTTCAACAGATTTATTGCCACGGATGTCTTCAAAGAGTGAGGATGGTAAAACTGATATCTACAGGAGAATTCTCTCTGTTCTTAAAAATGGCATAGTCATAGGTGATAAAACCTTTCAGTTTCTTGCATTCTCATCAAGCCAATTAAGAGATAATTCCTTGTGGATGTTTGCTTCCGGACCTGATATTGACGCAGCTTATATTAGAGCGTGGATGGGCGATTTTCGACATATCAAGAATCCCGCAAAGTATGCTGCTAGATTGGGCCAATCATTCGGCTCATCGACAGAGGCACTTTCAGTTGCTAGTAATGAAAGGGAAATTATTCCTGACATAGAGGTTCAACAGGGAGAAATCAAGTATGTCTTTTCTGATGGAATTGGAAAAATATCAAGCAAATTCGCCAAAGAGGTTGCTGCAAAATGTGGTTTCCAAGCCGTCCCGTCTGCTTTTCAAATTCGTTATGGTGGATATAAGGGTGTTGTTGCTGTTGATCCGTACTCAACTATAAAATTATCTCTGAGGAAGAGTATGTGCAAATTTGAATCAGACAACACAAAACTTGACGTCTTAGGCCATAGCAAATACCAACCATGCTTCCTTAATCGTCAACTGATTACTCTCATGTCTACTCTAGGTGTTAGAGACGAAATTTTTGAGAAAAAACAAAGTGAAGCTGTAGAACAATTGGATGCCATTTTAACAGATCCATTGAAGGCTCAAGAAGCTTTGGAGTTGATGTCTCCCGGAGAGAATACTAATATTCTCAAGGAAATGCTCAAATGTGGCTATCAACCAGATGTCGAGCCGTATCTGTCAATGATGTTACAAACTTTCCGGGCATCAAAGTTGCTAGAGTTACGCACCAAATCAAGAATCTTTATCCCAAATGGGAGAGCGATGATGGGATGTCTTGATGAGACCAGGACCTTGGAATATGGGCAGGTATTTGTGCAAATCTCCAGTGGTAGACATCGAAATTTATCTGAATCCTTCGCATTCAATAGAATTGGTCGAGAACACCATTTAGTTATTGAAGGAAATGTTACAGTTGCTAAAAATCCCTGCCTGCACCCTGGTGATGTTCGTGTATTAAAGGCTGTAAATATACCTGGTTTGTACCATATGGTTGACTGTGTAGTTTTTCCTCAAAAAGGATCAAGGCCTCATCCGAATGAATGCTCAGGTAGTGATTTAGATGGTGATATTTACTTTGTCTGTTGGGACACCGAATTGATCCCGTCTCGACAAATTCCACCTATGGATTATACTCCTGCACCTCCAAATGAGTTAGATCGTGATGTTACAACTGAGGATATCCAAGAATATTTTGTGAACTACATGGTTAATGATAGTCTTGGAATCATTGCCAATGCTCATACTGCCTTTGCAGATAAAGAGCTCTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCTTTGCAGATAAAGAGCTCTTTAAAGCAAGGAGTAGTCCTTGTTTGGAGCTTGCAAAGCTATTCTCCGTTGCTGTGGACTTCCCAAAAACTGGAGTACCAGCTATAATACCTTCTCATTTATATGTCAAAGAGTTTCCTGACTTTATGGAGAAGCCTGACCGACCCTCTTATGAATCAAACAAAGTAATTGGAAAACTTTTTCGGGCTGTGAAAGACATTGCACCAACTTTAAGCCATATTCGGTCATTTACTCGAGATGTAGCAAGAAGGTGTTACGACTGTGATATGGAAGTCGAAGGCTTTGAAGATTATGTTGAAGATGCCTTCTATCATAAAAGCAATTATGATTACAAGTTGGGGAATTTGCTTGATTATTATGGTATCAAGTCTGAGGCAGAAGTACTTAGTGGGAGTATCATGAGGATGTCCAAGTCTTTCACCAGGAGAAGAGATGCAGAAGCAATCAACTTGGCTGTAAGGTCTCTGAGAAAGGAGGCTAGGACATGGTTCAATGCAAGAGAAGGCGCAGATTCGAATTCAGATGATTTATTTGCCAAAGCTTCAGCTTGGTACTATGTTACATACCATCACTCTTATTGGGGCTGCTATAATGAGGGAATGAAACGCGACCATTATTTGAGCTTCCCCTGGTGTGTTTACGACAAACTGATGCAAATCAAGGAGAATAATTTGAGAAGAAGAGAGAGAGCTGCAAGACTGGCAAGTTTCGACAGATTCGGACATGTGTTAAATCTTGGTGGGAGTTGA
Protein Sequence
- >Csa_5G239140
MGKTIHISGFPSHVTADAVKNFLEGHTGPGTVYAIKVRPPKRGGGRLYAIVQFTSATQAELIISLANQRLWYGSSYLKARATEVDIVPKPRTYMYTLEELLLCFGCQVSTEKFRVLWEGNVDLVTFGIGMRKMNFHLKYKSVEYRLELSYEIIWQIQLHCPRDQSMKYLLIQLSGAPRIYKKVAPNSGQIFDNPLLNFFKEASDDQWVRTTDFTSSCSIGQSSSLCLKLPNGRQLPPFKQNFAYYEEFEHEFRLIDEDANFSFCRDLAPIVDSRSHVLPYKILFKINALVQYGCIPWPLLDASFYRLVERIITTRIEFVEHALEKLFHLKECNYDPSNFLTEQYRKYSRHPPNSPVISLDDGLVYVRRVQITPCKVFFCGPEVNVSNRVLRHFSQYIDNFLRVSFVDEEWDKMRSTDLLPRMSSKSEDGKTDIYRRILSVLKNGIVIGDKTFQFLAFSSSQLRDNSLWMFASGPDIDAAYIRAWMGDFRHIKNPAKYAARLGQSFGSSTEALSVASNEREIIPDIEVQQGEIKYVFSDGIGKISSKFAKEVAAKCGFQAVPSAFQIRYGGYKGVVAVDPYSTIKLSLRKSMCKFESDNTKLDVLGHSKYQPCFLNRQLITLMSTLGVRDEIFEKKQSEAVEQLDAILTDPLKAQEALELMSPGENTNILKEMLKCGYQPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGCLDETRTLEYGQVFVQISSGRHRNLSESFAFNRIGREHHLVIEGNVTVAKNPCLHPGDVRVLKAVNIPGLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPSRQIPPMDYTPAPPNELDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKELFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFADKELFKARSSPCLELAKLFSVAVDFPKTGVPAIIPSHLYVKEFPDFMEKPDRPSYESNKVIGKLFRAVKDIAPTLSHIRSFTRDVARRCYDCDMEVEGFEDYVEDAFYHKSNYDYKLGNLLDYYGIKSEAEVLSGSIMRMSKSFTRRRDAEAINLAVRSLRKEARTWFNAREGADSNSDDLFAKASAWYYVTYHHSYWGCYNEGMKRDHYLSFPWCVYDKLMQIKENNLRRRERAARLASFDRFGHVLNLGGS