Information report for CsaARC5
Gene Details
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Functional Descriptions
- By re-sequencing of bulked segregants, we identified the candidate gene Csa7G051430 encoding ACCUMULATION AND REPLICATION OF CHLOROPLASTS 5 (ARC5) that plays a vital role in chloroplast division in Arabidopsis.
- Using whole genome re-sequencing and genetic mapping, we demonstrated a non-synonymous mutation in the cucumber ARC5 homolog (CsaARC5) underlying the mutant phenotype. In agreement with the role of ARC5 in chloroplast division, we observed abnormal chloroplast development in fruit exocarp protoplasts in the mutant line.
- The results indicated that the reduced expression of CsaARC5 might block chloroplast division in cucumber to some extent, and supported that CsaARC5 as the gene underlying the lgp mutant.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: 101214220
- UniProt accessions: A0A0A0K2F7
Sequences
cDNA Sequence
- >Csa_7G051430
TCCTTTCCGTTTGTCAGCGGCGGAGTGGTTATTATCTCTCCTTCCCCATTGTTGTATAGCTCGCGTCGCCATTTACATAAAAGGATAACGGAAATGGAGAGTGGAGCAGAGCCACTGGCGGTGGACCATGACAAATGGCGACTCTACGAAGCTTACAACGAGCTTCATGGCCTCGCTCAGGAGTTCCACACTCCTTTCGACGCTCCTGCAGTCCTCGTGGTCGGCCACCAAACCGATGGCAAAAGCGCCTTGGTTGAAGCTCTCATGGGCTTCCAATTCAACCACGTCGGTGGCGGAACCAAGACTCGCCGACCCATTACTCTTCACATGAAGTACGACCCCGACTGCGAAACTCCCGTCTGTCATCTTGTCTCCGATGACGACCCCACTGCCGCCATCCATAAATCTCTCCACGAAATCCAGGCATTCATTGAAGCTGAAAATATGAGGTTGGAGAGTGAAACGAGTCAATTCTCGGCCAAGGAAATAATTATTAAAGTGGAGTATAAGTATTGCCCTAATCTTACGATTATTGACACTCCTGGGCTCATTGCTCCAGCTCCAGGTCGAAAGAATCGGGTGTTGCAGGCTCAAGCTCGTGCAGTCGAGTCACTAGTACGAGCTAAAATGCAGCACAGAGAGTTCATCATATTGTGTCTTGAAGATTGTAGTGACTGGAGTAATGCGACTACTCGAAGGGTCGTAATGCAAATTGATCCTGAACTCTCAAGGACTGTGATTGTATCAACCAAACTTGATACCAAGATACCCCAATTTGCTCGTTCTTCAGATGTGGAAGTCTTTCTTTTGCCTCCCTCTTGTGCACTCGATGGCATCATATTGGGGGACTCTCCATTTTTCACATCTGTTCCTTCAGGCAGAGTTGGTTCTGCACATGATTCTGTTTATAAATCAAATGATGAGTTCAAAGAGGCTATAGCTTTGAGAGAGAAGGAAGACATTATCCTTTTGGAGGAAAAGTTATGCCGACCTTTGGCTGAGAAAGAAAAAGTGAGAATTGGTGTAAGCAAATTGAGAACGTTCTTAGAAGAACTGCTACAGAAAAGGTATATGGATAGCGTGCCCTTGATCATTTCACTTCTTGATAAGGAGTACAGGAGCACAACTCGAAAACTGAATGAGATTGATCAAGAACTCAGTAATTTGGACGAAGTAACATTGAAGGAGAAAGGAAGAACATTTCATGACTTGTTTTTGACGAAGTTATCTTTGCTATTAAAAGGAACAGTTGTTGCTCCTCCAGATAAATTTGGTGAAACACTTCAAGATGAAAGAATCAATGGAGGGGCTTTTGTTGGTACCGATGGTCTTCAATTTCCGCAGAAACTAATCCCGAATGCAGGCATGCGTTTATATGGTGGTGCACAATATCATCGTGCTATGGCTGAGTTCCGTTTTGTTGTTGGGGGCACAAAGTGTCCTCCAATTACAAGGGAAGAAATTGTAAATGCATGTGGAGTTGAGGACATACATGATGGAGCAAACTACTCTAGAACGGCTTGTGTAATAGCTGTGGCCAAGGCTCGAGATACCTTTGAACCATATCTTCATCAGTTGGGCTGTAGACTATTGCACATTTTGAAGAGACTGCTTCCCATTTCTGTTTACCTTCTTCAGAAAGATGGGGAGTATTTAAGTGGTCACCAGGTGTTTCTCAACCGTGTTTCTACTGCCTTCAACAACTTTGCTGAATCTACTGAGAAGGCATGCCGTGAAAAATGCATGGAAGATTTAGTTAGCACTACCCGCTACGTCTCATGGTCGCTTCACAACAAGAATCGATCGGGGCTACGTCACTTCCTAGACTCTTTTTGTGGAAATGATCAATCCATCATGGGAGGGAATTTGGCTTCTAGTGGCCTTTCTCAAGATTCAACTTTTGGATCTCTTAGCAATGAGCGGCAAGACAATAAACCAAGGCCAGATGTAAAGCTCAGTCAATTGGCATCAGGAATTGACTCCAGCTCTTGTATTCAGGGAACAGAAACAAGGCTAGTTGATCTCTTAGATTGCACGCTTTGGAACAGAAGGCTTGCTCCTTCATCTGAAAGAATTGTTCATGCTCTTGTACAGCAGATATTCCATGGAATTAGAGAATATTTCTTGGCTTCTGCAGAACTAAAGTTCAACTGTTTTCTTCTAATGCCAGTAGTGGACAAGTTGCCAGCACTTCTTCGCGAGGACTTAGAGTCTGCTTTTGAAAATGAATTGGATAATGTTTTCGACATCACGAATTTGGTACACTCCTTAAGCCAGCGAAAGCGCGATGCTGAGGTTGAACTAAGAAGGATTAAGAGGCTCAAGGAGAAGTTTAGAGTGGTACATCAGCAGCTCATACTGCAACAATCAAAGCCTGAAATGAAAACTAGAGAAGGTGATACGAAATGAAG
CDS Sequence
- >Csa_7G051430
ATGGAGAGTGGAGCAGAGCCACTGGCGGTGGACCATGACAAATGGCGACTCTACGAAGCTTACAACGAGCTTCATGGCCTCGCTCAGGAGTTCCACACTCCTTTCGACGCTCCTGCAGTCCTCGTGGTCGGCCACCAAACCGATGGCAAAAGCGCCTTGGTTGAAGCTCTCATGGGCTTCCAATTCAACCACGTCGGTGGCGGAACCAAGACTCGCCGACCCATTACTCTTCACATGAAGTACGACCCCGACTGCGAAACTCCCGTCTGTCATCTTGTCTCCGATGACGACCCCACTGCCGCCATCCATAAATCTCTCCACGAAATCCAGGCATTCATTGAAGCTGAAAATATGAGGTTGGAGAGTGAAACGAGTCAATTCTCGGCCAAGGAAATAATTATTAAAGTGGAGTATAAGTATTGCCCTAATCTTACGATTATTGACACTCCTGGGCTCATTGCTCCAGCTCCAGGTCGAAAGAATCGGGTGTTGCAGGCTCAAGCTCGTGCAGTCGAGTCACTAGTACGAGCTAAAATGCAGCACAGAGAGTTCATCATATTGTGTCTTGAAGATTGTAGTGACTGGAGTAATGCGACTACTCGAAGGGTCGTAATGCAAATTGATCCTGAACTCTCAAGGACTGTGATTGTATCAACCAAACTTGATACCAAGATACCCCAATTTGCTCGTTCTTCAGATGTGGAAGTCTTTCTTTTGCCTCCCTCTTGTGCACTCGATGGCATCATATTGGGGGACTCTCCATTTTTCACATCTGTTCCTTCAGGCAGAGTTGGTTCTGCACATGATTCTGTTTATAAATCAAATGATGAGTTCAAAGAGGCTATAGCTTTGAGAGAGAAGGAAGACATTATCCTTTTGGAGGAAAAGTTATGCCGACCTTTGGCTGAGAAAGAAAAAGTGAGAATTGGTGTAAGCAAATTGAGAACGTTCTTAGAAGAACTGCTACAGAAAAGGTATATGGATAGCGTGCCCTTGATCATTTCACTTCTTGATAAGGAGTACAGGAGCACAACTCGAAAACTGAATGAGATTGATCAAGAACTCAGTAATTTGGACGAAGTAACATTGAAGGAGAAAGGAAGAACATTTCATGACTTGTTTTTGACGAAGTTATCTTTGCTATTAAAAGGAACAGTTGTTGCTCCTCCAGATAAATTTGGTGAAACACTTCAAGATGAAAGAATCAATGGAGGGGCTTTTGTTGGTACCGATGGTCTTCAATTTCCGCAGAAACTAATCCCGAATGCAGGCATGCGTTTATATGGTGGTGCACAATATCATCGTGCTATGGCTGAGTTCCGTTTTGTTGTTGGGGGCACAAAGTGTCCTCCAATTACAAGGGAAGAAATTGTAAATGCATGTGGAGTTGAGGACATACATGATGGAGCAAACTACTCTAGAACGGCTTGTGTAATAGCTGTGGCCAAGGCTCGAGATACCTTTGAACCATATCTTCATCAGTTGGGCTGTAGACTATTGCACATTTTGAAGAGACTGCTTCCCATTTCTGTTTACCTTCTTCAGAAAGATGGGGAGTATTTAAGTGGTCACCAGGTGTTTCTCAACCGTGTTTCTACTGCCTTCAACAACTTTGCTGAATCTACTGAGAAGGCATGCCGTGAAAAATGCATGGAAGATTTAGTTAGCACTACCCGCTACGTCTCATGGTCGCTTCACAACAAGAATCGATCGGGGCTACGTCACTTCCTAGACTCTTTTTGTGGAAATGATCAATCCATCATGGGAGGGAATTTGGCTTCTAGTGGCCTTTCTCAAGATTCAACTTTTGGATCTCTTAGCAATGAGCGGCAAGACAATAAACCAAGGCCAGATGTAAAGCTCAGTCAATTGGCATCAGGAATTGACTCCAGCTCTTGTATTCAGGGAACAGAAACAAGGCTAGTTGATCTCTTAGATTGCACGCTTTGGAACAGAAGGCTTGCTCCTTCATCTGAAAGAATTGTTCATGCTCTTGTACAGCAGATATTCCATGGAATTAGAGAATATTTCTTGGCTTCTGCAGAACTAAAGTTCAACTGTTTTCTTCTAATGCCAGTAGTGGACAAGTTGCCAGCACTTCTTCGCGAGGACTTAGAGTCTGCTTTTGAAAATGAATTGGATAATGTTTTCGACATCACGAATTTGGTACACTCCTTAAGCCAGCGAAAGCGCGATGCTGAGGTTGAACTAAGAAGGATTAAGAGGCTCAAGGAGAAGTTTAGAGTGGTACATCAGCAGCTCATACTGCAACAATCAAAGCCTGAAATGAAAACTAGAGAAGGTGATACGAAATGA
Protein Sequence
- >Csa_7G051430
MESGAEPLAVDHDKWRLYEAYNELHGLAQEFHTPFDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMKYDPDCETPVCHLVSDDDPTAAIHKSLHEIQAFIEAENMRLESETSQFSAKEIIIKVEYKYCPNLTIIDTPGLIAPAPGRKNRVLQAQARAVESLVRAKMQHREFIILCLEDCSDWSNATTRRVVMQIDPELSRTVIVSTKLDTKIPQFARSSDVEVFLLPPSCALDGIILGDSPFFTSVPSGRVGSAHDSVYKSNDEFKEAIALREKEDIILLEEKLCRPLAEKEKVRIGVSKLRTFLEELLQKRYMDSVPLIISLLDKEYRSTTRKLNEIDQELSNLDEVTLKEKGRTFHDLFLTKLSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIPNAGMRLYGGAQYHRAMAEFRFVVGGTKCPPITREEIVNACGVEDIHDGANYSRTACVIAVAKARDTFEPYLHQLGCRLLHILKRLLPISVYLLQKDGEYLSGHQVFLNRVSTAFNNFAESTEKACREKCMEDLVSTTRYVSWSLHNKNRSGLRHFLDSFCGNDQSIMGGNLASSGLSQDSTFGSLSNERQDNKPRPDVKLSQLASGIDSSSCIQGTETRLVDLLDCTLWNRRLAPSSERIVHALVQQIFHGIREYFLASAELKFNCFLLMPVVDKLPALLREDLESAFENELDNVFDITNLVHSLSQRKRDAEVELRRIKRLKEKFRVVHQQLILQQSKPEMKTREGDTK