Information report for CsARN6.1
Gene Details
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Functional Descriptions
- The major-effect quantitative trait locus CsARN6.1 encodes an AAA ATPase domain-containing protein that is associated with waterlogging stress tolerance by promoting adventitious root formation.
- Transgenic cucumber expressing the CsARN6.1Asp allele from Zaoer-N exhibited a significant increase in number of ARs compared with the wild type expressing the allele from Pepino under waterlogging conditions.
- CsARN6.1 increases the number of ARs via its ATPase activity.
- A CsEIL3-CsARN6.1 module promotes waterlogging-triggered adventitious root formation in cucumber by activating the expression of CsPrx5.
- CsARN6.1, encoding an AAA ATPase domain-containing protein, were more tolerant to waterlogging through increased AR formation.
Functional Keywords
Literature and News
- A CsEIL3-CsARN6.1 module promotes waterlogging-triggered adventitious root formation in cucumber by activating the expression of CsPrx5. DOI: 10.1111/tpj.16172 ; PMID: 36871136
- The major-effect quantitative trait locus CsARN6.1 encodes an AAA ATPase domain-containing protein that is associated with waterlogging stress tolerance by promoting adventitious root formation. DOI: 10.1111/tpj.13819 ; PMID: 29315927
Gene Resources
- NCBI ID: 101205377
- UniProt accessions: A0A0A0KGJ8
Sequences
cDNA Sequence
- >Csa_6G504460
GCTATCTCCGATCATAATTCTTAGAGCCCAAGGCAAAGACACCGCTCAACTTCGTGTCTATAAATACTATTTCCTTTCTTTGATTTCTCTATCCCCCCCAATTTTGGTCGCCCAACATCATGAATTTCAAAGACATGGCCGTTCCCCAGTCCGTCTCTGCTCTCTTCTCCGCCTACGCCTCCTTCGCCACCACCATGATGCTCATCCGTTCCCTCACCAACGAACTCCTCCCCGCCAAACTTATCTCCTTCTCTTCAATTTTCGTCTACTTCTTCGGTTCTATTTCTTCTCAGACTAAGCTCGTCATTGAGGAGAATTCTGGGTTTGCCATGAACGAGGTTTTTCAGGCCGCCGAGTTTTATCTCCGTACTAAAATCAGCCCTTCTATTGATACTCTCAAGGTCACCAAAACCCCTCGTCAGAAGAAAGTCACGCTTTCCATCGATAAGGACCAAGAAATCATTGATTACTTCGAGAATATTCGCCTCCAGTGGCGATTTCTCTGTTCCGTAGATGAACGCAATGGGGGTGGAAGCAGAGAGAAGCGTCAATTTGAGCTTTCGTTTCCCAAGAAATTCAGAGACAGAATTGTCGATTTCTATTTACCTTATGTGTTGAGAAGGGCGAAGGAGATTAAAGAGGAGAACAAAGTTGTCAAGATTTTTAGCCAGGAATGTCAGTATGATGACGACAGTGGCGGGAATTGGGGCTCTGTAAATCTAGAACATCCGGCGACGTTTGATACGCTGGCTATGGACCCTGAGTTGAAGCAATCGATAATCGAGGATTTGGATAGGTTTGTTAGAAGGAAGGATTTCTATAAAAAAGTGGGGAAGGCTTGGAAGAGGGGATATTTGTTGGAGGGTCCTCCTGGTACGGGAAAATCAAGCTTAATTGCTGCCATGGCTAACTACCTTAAGTTTGACATTTACGATTTGGATCTCACAAACATGTACAGCAATAGCGATCTCAGGAGGGTTTTGTTAGCCACAACAAATCGATCAATTTTGGTGATCGAGGATATAGATTGCAGCGTGCAAATACAAAATCGCCAAAGTGAAGAACATTTTGATCAATCCAGCAGCAAGTTTACCTTGTCGGGAATGCTTAATTTCATCGACGGATTGTGGTCAAGTTGTGGAGACGAAAGAATCATAATCTTCACGACGAACAACAAGCACCGATTGGATCCTGCTCTGCTACGGGCGGGTCGGATGGATATGCATATAAACATGTCGTATTGTAGCCGTGAAGGGTTGAGGGTGTTGGTGTCGAACTACCTCGGTGGGGAAGCGACTAAGCACAGTACGTATGGAGAAATAGAAGAATTGATCGGAGAAATGGAAGTGGCCCCGGCAGAGATAGCAGAAGAGCTAATGAAGGGGGAGGAGACGGAGGCGGTTCTTGGGGGACTGGTGGGTTTTCTGAAACGTAAAAGAGAAGAAGAGAGGAAGGAGAAAGAGGAGAAGAAAGAAGAGAAAGGAGAAGAAGAAGAAAAAGTAGAAGAAGAAGAAGAAGAAGGGGATAAAATAGTAGAAGAAGAAGAGGCAACGAAGAAGACAAACTGGGAATTGAGAAATAGAGTGAGAAGAACTGGATATGGATATAGAGGACGTGGGCGAGGGCGTGGGTTCACTCGGCGAATACCGATGTGAATTGGTGGGTGGAGTGCTTAAGCATCGAGGGAATAGAAGGAAACCCTGTGTTTTTGTGATTGGGGTTTTGTCCGTCTTTGTCAGAGGCCAAGTGGACTCAGAGTTGTTGGGTTCGAGTTTAGTTATTGCAATAAATTGCGTGAGTGTGAAAAGAGCCCATCATATATTACA
CDS Sequence
- >Csa_6G504460
ATGAATTTCAAAGACATGGCCGTTCCCCAGTCCGTCTCTGCTCTCTTCTCCGCCTACGCCTCCTTCGCCACCACCATGATGCTCATCCGTTCCCTCACCAACGAACTCCTCCCCGCCAAACTTATCTCCTTCTCTTCAATTTTCGTCTACTTCTTCGGTTCTATTTCTTCTCAGACTAAGCTCGTCATTGAGGAGAATTCTGGGTTTGCCATGAACGAGGTTTTTCAGGCCGCCGAGTTTTATCTCCGTACTAAAATCAGCCCTTCTATTGATACTCTCAAGGTCACCAAAACCCCTCGTCAGAAGAAAGTCACGCTTTCCATCGATAAGGACCAAGAAATCATTGATTACTTCGAGAATATTCGCCTCCAGTGGCGATTTCTCTGTTCCGTAGATGAACGCAATGGGGGTGGAAGCAGAGAGAAGCGTCAATTTGAGCTTTCGTTTCCCAAGAAATTCAGAGACAGAATTGTCGATTTCTATTTACCTTATGTGTTGAGAAGGGCGAAGGAGATTAAAGAGGAGAACAAAGTTGTCAAGATTTTTAGCCAGGAATGTCAGTATGATGACGACAGTGGCGGGAATTGGGGCTCTGTAAATCTAGAACATCCGGCGACGTTTGATACGCTGGCTATGGACCCTGAGTTGAAGCAATCGATAATCGAGGATTTGGATAGGTTTGTTAGAAGGAAGGATTTCTATAAAAAAGTGGGGAAGGCTTGGAAGAGGGGATATTTGTTGGAGGGTCCTCCTGGTACGGGAAAATCAAGCTTAATTGCTGCCATGGCTAACTACCTTAAGTTTGACATTTACGATTTGGATCTCACAAACATGTACAGCAATAGCGATCTCAGGAGGGTTTTGTTAGCCACAACAAATCGATCAATTTTGGTGATCGAGGATATAGATTGCAGCGTGCAAATACAAAATCGCCAAAGTGAAGAACATTTTGATCAATCCAGCAGCAAGTTTACCTTGTCGGGAATGCTTAATTTCATCGACGGATTGTGGTCAAGTTGTGGAGACGAAAGAATCATAATCTTCACGACGAACAACAAGCACCGATTGGATCCTGCTCTGCTACGGGCGGGTCGGATGGATATGCATATAAACATGTCGTATTGTAGCCGTGAAGGGTTGAGGGTGTTGGTGTCGAACTACCTCGGTGGGGAAGCGACTAAGCACAGTACGTATGGAGAAATAGAAGAATTGATCGGAGAAATGGAAGTGGCCCCGGCAGAGATAGCAGAAGAGCTAATGAAGGGGGAGGAGACGGAGGCGGTTCTTGGGGGACTGGTGGGTTTTCTGAAACGTAAAAGAGAAGAAGAGAGGAAGGAGAAAGAGGAGAAGAAAGAAGAGAAAGGAGAAGAAGAAGAAAAAGTAGAAGAAGAAGAAGAAGAAGGGGATAAAATAGTAGAAGAAGAAGAGGCAACGAAGAAGACAAACTGGGAATTGAGAAATAGAGTGAGAAGAACTGGATATGGATATAGAGGACGTGGGCGAGGGCGTGGGTTCACTCGGCGAATACCGATGTGA
Protein Sequence
- >Csa_6G504460
MNFKDMAVPQSVSALFSAYASFATTMMLIRSLTNELLPAKLISFSSIFVYFFGSISSQTKLVIEENSGFAMNEVFQAAEFYLRTKISPSIDTLKVTKTPRQKKVTLSIDKDQEIIDYFENIRLQWRFLCSVDERNGGGSREKRQFELSFPKKFRDRIVDFYLPYVLRRAKEIKEENKVVKIFSQECQYDDDSGGNWGSVNLEHPATFDTLAMDPELKQSIIEDLDRFVRRKDFYKKVGKAWKRGYLLEGPPGTGKSSLIAAMANYLKFDIYDLDLTNMYSNSDLRRVLLATTNRSILVIEDIDCSVQIQNRQSEEHFDQSSSKFTLSGMLNFIDGLWSSCGDERIIIFTTNNKHRLDPALLRAGRMDMHINMSYCSREGLRVLVSNYLGGEATKHSTYGEIEELIGEMEVAPAEIAEELMKGEETEAVLGGLVGFLKRKREEERKEKEEKKEEKGEEEEKVEEEEEEGDKIVEEEEATKKTNWELRNRVRRTGYGYRGRGRGRGFTRRIPM