Gene Details:

Functional Descriptions:

  • The major-effect quantitative trait locus CsARN6.1 encodes an AAA ATPase domain-containing protein that is associated with waterlogging stress tolerance by promoting adventitious root formation.
  • Transgenic cucumber expressing the CsARN6.1Asp allele from Zaoer-N exhibited a significant increase in number of ARs compared with the wild type expressing the allele from Pepino under waterlogging conditions.
  • CsARN6.1 increases the number of ARs via its ATPase activity.
  • A CsEIL3-CsARN6.1 module promotes waterlogging-triggered adventitious root formation in cucumber by activating the expression of CsPrx5.
  • CsARN6.1, encoding an AAA ATPase domain-containing protein, were more tolerant to waterlogging through increased AR formation.

Literature:

Gene Resources:

Orthologs:

Sequences:

cDNA Sequence
  • >Csa_6G504460
    GCTATCTCCGATCATAATTCTTAGAGCCCAAGGCAAAGACACCGCTCAACTTCGTGTCTATAAATACTATTTCCTTTCTTTGATTTCTCTATCCCCCCCAATTTTGGTCGCCCAACATCATGAATTTCAAAGACATGGCCGTTCCCCAGTCCGTCTCTGCTCTCTTCTCCGCCTACGCCTCCTTCGCCACCACCATGATGCTCATCCGTTCCCTCACCAACGAACTCCTCCCCGCCAAACTTATCTCCTTCTCTTCAATTTTCGTCTACTTCTTCGGTTCTATTTCTTCTCAGACTAAGCTCGTCATTGAGGAGAATTCTGGGTTTGCCATGAACGAGGTTTTTCAGGCCGCCGAGTTTTATCTCCGTACTAAAATCAGCCCTTCTATTGATACTCTCAAGGTCACCAAAACCCCTCGTCAGAAGAAAGTCACGCTTTCCATCGATAAGGACCAAGAAATCATTGATTACTTCGAGAATATTCGCCTCCAGTGGCGATTTCTCTGTTCCGTAGATGAACGCAATGGGGGTGGAAGCAGAGAGAAGCGTCAATTTGAGCTTTCGTTTCCCAAGAAATTCAGAGACAGAATTGTCGATTTCTATTTACCTTATGTGTTGAGAAGGGCGAAGGAGATTAAAGAGGAGAACAAAGTTGTCAAGATTTTTAGCCAGGAATGTCAGTATGATGACGACAGTGGCGGGAATTGGGGCTCTGTAAATCTAGAACATCCGGCGACGTTTGATACGCTGGCTATGGACCCTGAGTTGAAGCAATCGATAATCGAGGATTTGGATAGGTTTGTTAGAAGGAAGGATTTCTATAAAAAAGTGGGGAAGGCTTGGAAGAGGGGATATTTGTTGGAGGGTCCTCCTGGTACGGGAAAATCAAGCTTAATTGCTGCCATGGCTAACTACCTTAAGTTTGACATTTACGATTTGGATCTCACAAACATGTACAGCAATAGCGATCTCAGGAGGGTTTTGTTAGCCACAACAAATCGATCAATTTTGGTGATCGAGGATATAGATTGCAGCGTGCAAATACAAAATCGCCAAAGTGAAGAACATTTTGATCAATCCAGCAGCAAGTTTACCTTGTCGGGAATGCTTAATTTCATCGACGGATTGTGGTCAAGTTGTGGAGACGAAAGAATCATAATCTTCACGACGAACAACAAGCACCGATTGGATCCTGCTCTGCTACGGGCGGGTCGGATGGATATGCATATAAACATGTCGTATTGTAGCCGTGAAGGGTTGAGGGTGTTGGTGTCGAACTACCTCGGTGGGGAAGCGACTAAGCACAGTACGTATGGAGAAATAGAAGAATTGATCGGAGAAATGGAAGTGGCCCCGGCAGAGATAGCAGAAGAGCTAATGAAGGGGGAGGAGACGGAGGCGGTTCTTGGGGGACTGGTGGGTTTTCTGAAACGTAAAAGAGAAGAAGAGAGGAAGGAGAAAGAGGAGAAGAAAGAAGAGAAAGGAGAAGAAGAAGAAAAAGTAGAAGAAGAAGAAGAAGAAGGGGATAAAATAGTAGAAGAAGAAGAGGCAACGAAGAAGACAAACTGGGAATTGAGAAATAGAGTGAGAAGAACTGGATATGGATATAGAGGACGTGGGCGAGGGCGTGGGTTCACTCGGCGAATACCGATGTGAATTGGTGGGTGGAGTGCTTAAGCATCGAGGGAATAGAAGGAAACCCTGTGTTTTTGTGATTGGGGTTTTGTCCGTCTTTGTCAGAGGCCAAGTGGACTCAGAGTTGTTGGGTTCGAGTTTAGTTATTGCAATAAATTGCGTGAGTGTGAAAAGAGCCCATCATATATTACA
CDS Sequence
  • >Csa_6G504460
    ATGAATTTCAAAGACATGGCCGTTCCCCAGTCCGTCTCTGCTCTCTTCTCCGCCTACGCCTCCTTCGCCACCACCATGATGCTCATCCGTTCCCTCACCAACGAACTCCTCCCCGCCAAACTTATCTCCTTCTCTTCAATTTTCGTCTACTTCTTCGGTTCTATTTCTTCTCAGACTAAGCTCGTCATTGAGGAGAATTCTGGGTTTGCCATGAACGAGGTTTTTCAGGCCGCCGAGTTTTATCTCCGTACTAAAATCAGCCCTTCTATTGATACTCTCAAGGTCACCAAAACCCCTCGTCAGAAGAAAGTCACGCTTTCCATCGATAAGGACCAAGAAATCATTGATTACTTCGAGAATATTCGCCTCCAGTGGCGATTTCTCTGTTCCGTAGATGAACGCAATGGGGGTGGAAGCAGAGAGAAGCGTCAATTTGAGCTTTCGTTTCCCAAGAAATTCAGAGACAGAATTGTCGATTTCTATTTACCTTATGTGTTGAGAAGGGCGAAGGAGATTAAAGAGGAGAACAAAGTTGTCAAGATTTTTAGCCAGGAATGTCAGTATGATGACGACAGTGGCGGGAATTGGGGCTCTGTAAATCTAGAACATCCGGCGACGTTTGATACGCTGGCTATGGACCCTGAGTTGAAGCAATCGATAATCGAGGATTTGGATAGGTTTGTTAGAAGGAAGGATTTCTATAAAAAAGTGGGGAAGGCTTGGAAGAGGGGATATTTGTTGGAGGGTCCTCCTGGTACGGGAAAATCAAGCTTAATTGCTGCCATGGCTAACTACCTTAAGTTTGACATTTACGATTTGGATCTCACAAACATGTACAGCAATAGCGATCTCAGGAGGGTTTTGTTAGCCACAACAAATCGATCAATTTTGGTGATCGAGGATATAGATTGCAGCGTGCAAATACAAAATCGCCAAAGTGAAGAACATTTTGATCAATCCAGCAGCAAGTTTACCTTGTCGGGAATGCTTAATTTCATCGACGGATTGTGGTCAAGTTGTGGAGACGAAAGAATCATAATCTTCACGACGAACAACAAGCACCGATTGGATCCTGCTCTGCTACGGGCGGGTCGGATGGATATGCATATAAACATGTCGTATTGTAGCCGTGAAGGGTTGAGGGTGTTGGTGTCGAACTACCTCGGTGGGGAAGCGACTAAGCACAGTACGTATGGAGAAATAGAAGAATTGATCGGAGAAATGGAAGTGGCCCCGGCAGAGATAGCAGAAGAGCTAATGAAGGGGGAGGAGACGGAGGCGGTTCTTGGGGGACTGGTGGGTTTTCTGAAACGTAAAAGAGAAGAAGAGAGGAAGGAGAAAGAGGAGAAGAAAGAAGAGAAAGGAGAAGAAGAAGAAAAAGTAGAAGAAGAAGAAGAAGAAGGGGATAAAATAGTAGAAGAAGAAGAGGCAACGAAGAAGACAAACTGGGAATTGAGAAATAGAGTGAGAAGAACTGGATATGGATATAGAGGACGTGGGCGAGGGCGTGGGTTCACTCGGCGAATACCGATGTGA
Protein Sequence
  • >Csa_6G504460
    MNFKDMAVPQSVSALFSAYASFATTMMLIRSLTNELLPAKLISFSSIFVYFFGSISSQTKLVIEENSGFAMNEVFQAAEFYLRTKISPSIDTLKVTKTPRQKKVTLSIDKDQEIIDYFENIRLQWRFLCSVDERNGGGSREKRQFELSFPKKFRDRIVDFYLPYVLRRAKEIKEENKVVKIFSQECQYDDDSGGNWGSVNLEHPATFDTLAMDPELKQSIIEDLDRFVRRKDFYKKVGKAWKRGYLLEGPPGTGKSSLIAAMANYLKFDIYDLDLTNMYSNSDLRRVLLATTNRSILVIEDIDCSVQIQNRQSEEHFDQSSSKFTLSGMLNFIDGLWSSCGDERIIIFTTNNKHRLDPALLRAGRMDMHINMSYCSREGLRVLVSNYLGGEATKHSTYGEIEELIGEMEVAPAEIAEELMKGEETEAVLGGLVGFLKRKREEERKEKEEKKEEKGEEEEKVEEEEEEGDKIVEEEEATKKTNWELRNRVRRTGYGYRGRGRGRGFTRRIPM