Gene Details:
- Gene ID: Csa_6G504460
- Gene Symbol: CsARN6.1
- Gene Name: AAA+ ATPase domain-containing protein
- Genome: Cucumis sativus ASM407v2
- Species: Cucumis sativus
Functional Descriptions:
- The major-effect quantitative trait locus CsARN6.1 encodes an AAA ATPase domain-containing protein that is associated with waterlogging stress tolerance by promoting adventitious root formation.
- Transgenic cucumber expressing the CsARN6.1Asp allele from Zaoer-N exhibited a significant increase in number of ARs compared with the wild type expressing the allele from Pepino under waterlogging conditions.
- CsARN6.1 increases the number of ARs via its ATPase activity.
- A CsEIL3-CsARN6.1 module promotes waterlogging-triggered adventitious root formation in cucumber by activating the expression of CsPrx5.
- CsARN6.1, encoding an AAA ATPase domain-containing protein, were more tolerant to waterlogging through increased AR formation.
Function-related keywords:
- root , stress , atpase , tolerance , stress-tolerance , adventitious-root , adventitious-root-formation , root-number , protein
Literature:
- A CsEIL3-CsARN6.1 module promotes waterlogging-triggered adventitious root formation in cucumber by activating the expression of CsPrx5. DOI: 10.1111/tpj.16172 ; PMID: 36871136
- The major-effect quantitative trait locus CsARN6.1 encodes an AAA ATPase domain-containing protein that is associated with waterlogging stress tolerance by promoting adventitious root formation. DOI: 10.1111/tpj.13819 ; PMID: 29315927
Related News:
Gene Resources:
- NCBI ID: 101205377
- UniProt accessions: A0A0A0KGJ8
Orthologs:
Sequences:
cDNA Sequence
- >Csa_6G504460
GCTATCTCCGATCATAATTCTTAGAGCCCAAGGCAAAGACACCGCTCAACTTCGTGTCTATAAATACTATTTCCTTTCTTTGATTTCTCTATCCCCCCCAATTTTGGTCGCCCAACATCATGAATTTCAAAGACATGGCCGTTCCCCAGTCCGTCTCTGCTCTCTTCTCCGCCTACGCCTCCTTCGCCACCACCATGATGCTCATCCGTTCCCTCACCAACGAACTCCTCCCCGCCAAACTTATCTCCTTCTCTTCAATTTTCGTCTACTTCTTCGGTTCTATTTCTTCTCAGACTAAGCTCGTCATTGAGGAGAATTCTGGGTTTGCCATGAACGAGGTTTTTCAGGCCGCCGAGTTTTATCTCCGTACTAAAATCAGCCCTTCTATTGATACTCTCAAGGTCACCAAAACCCCTCGTCAGAAGAAAGTCACGCTTTCCATCGATAAGGACCAAGAAATCATTGATTACTTCGAGAATATTCGCCTCCAGTGGCGATTTCTCTGTTCCGTAGATGAACGCAATGGGGGTGGAAGCAGAGAGAAGCGTCAATTTGAGCTTTCGTTTCCCAAGAAATTCAGAGACAGAATTGTCGATTTCTATTTACCTTATGTGTTGAGAAGGGCGAAGGAGATTAAAGAGGAGAACAAAGTTGTCAAGATTTTTAGCCAGGAATGTCAGTATGATGACGACAGTGGCGGGAATTGGGGCTCTGTAAATCTAGAACATCCGGCGACGTTTGATACGCTGGCTATGGACCCTGAGTTGAAGCAATCGATAATCGAGGATTTGGATAGGTTTGTTAGAAGGAAGGATTTCTATAAAAAAGTGGGGAAGGCTTGGAAGAGGGGATATTTGTTGGAGGGTCCTCCTGGTACGGGAAAATCAAGCTTAATTGCTGCCATGGCTAACTACCTTAAGTTTGACATTTACGATTTGGATCTCACAAACATGTACAGCAATAGCGATCTCAGGAGGGTTTTGTTAGCCACAACAAATCGATCAATTTTGGTGATCGAGGATATAGATTGCAGCGTGCAAATACAAAATCGCCAAAGTGAAGAACATTTTGATCAATCCAGCAGCAAGTTTACCTTGTCGGGAATGCTTAATTTCATCGACGGATTGTGGTCAAGTTGTGGAGACGAAAGAATCATAATCTTCACGACGAACAACAAGCACCGATTGGATCCTGCTCTGCTACGGGCGGGTCGGATGGATATGCATATAAACATGTCGTATTGTAGCCGTGAAGGGTTGAGGGTGTTGGTGTCGAACTACCTCGGTGGGGAAGCGACTAAGCACAGTACGTATGGAGAAATAGAAGAATTGATCGGAGAAATGGAAGTGGCCCCGGCAGAGATAGCAGAAGAGCTAATGAAGGGGGAGGAGACGGAGGCGGTTCTTGGGGGACTGGTGGGTTTTCTGAAACGTAAAAGAGAAGAAGAGAGGAAGGAGAAAGAGGAGAAGAAAGAAGAGAAAGGAGAAGAAGAAGAAAAAGTAGAAGAAGAAGAAGAAGAAGGGGATAAAATAGTAGAAGAAGAAGAGGCAACGAAGAAGACAAACTGGGAATTGAGAAATAGAGTGAGAAGAACTGGATATGGATATAGAGGACGTGGGCGAGGGCGTGGGTTCACTCGGCGAATACCGATGTGAATTGGTGGGTGGAGTGCTTAAGCATCGAGGGAATAGAAGGAAACCCTGTGTTTTTGTGATTGGGGTTTTGTCCGTCTTTGTCAGAGGCCAAGTGGACTCAGAGTTGTTGGGTTCGAGTTTAGTTATTGCAATAAATTGCGTGAGTGTGAAAAGAGCCCATCATATATTACA
CDS Sequence
- >Csa_6G504460
ATGAATTTCAAAGACATGGCCGTTCCCCAGTCCGTCTCTGCTCTCTTCTCCGCCTACGCCTCCTTCGCCACCACCATGATGCTCATCCGTTCCCTCACCAACGAACTCCTCCCCGCCAAACTTATCTCCTTCTCTTCAATTTTCGTCTACTTCTTCGGTTCTATTTCTTCTCAGACTAAGCTCGTCATTGAGGAGAATTCTGGGTTTGCCATGAACGAGGTTTTTCAGGCCGCCGAGTTTTATCTCCGTACTAAAATCAGCCCTTCTATTGATACTCTCAAGGTCACCAAAACCCCTCGTCAGAAGAAAGTCACGCTTTCCATCGATAAGGACCAAGAAATCATTGATTACTTCGAGAATATTCGCCTCCAGTGGCGATTTCTCTGTTCCGTAGATGAACGCAATGGGGGTGGAAGCAGAGAGAAGCGTCAATTTGAGCTTTCGTTTCCCAAGAAATTCAGAGACAGAATTGTCGATTTCTATTTACCTTATGTGTTGAGAAGGGCGAAGGAGATTAAAGAGGAGAACAAAGTTGTCAAGATTTTTAGCCAGGAATGTCAGTATGATGACGACAGTGGCGGGAATTGGGGCTCTGTAAATCTAGAACATCCGGCGACGTTTGATACGCTGGCTATGGACCCTGAGTTGAAGCAATCGATAATCGAGGATTTGGATAGGTTTGTTAGAAGGAAGGATTTCTATAAAAAAGTGGGGAAGGCTTGGAAGAGGGGATATTTGTTGGAGGGTCCTCCTGGTACGGGAAAATCAAGCTTAATTGCTGCCATGGCTAACTACCTTAAGTTTGACATTTACGATTTGGATCTCACAAACATGTACAGCAATAGCGATCTCAGGAGGGTTTTGTTAGCCACAACAAATCGATCAATTTTGGTGATCGAGGATATAGATTGCAGCGTGCAAATACAAAATCGCCAAAGTGAAGAACATTTTGATCAATCCAGCAGCAAGTTTACCTTGTCGGGAATGCTTAATTTCATCGACGGATTGTGGTCAAGTTGTGGAGACGAAAGAATCATAATCTTCACGACGAACAACAAGCACCGATTGGATCCTGCTCTGCTACGGGCGGGTCGGATGGATATGCATATAAACATGTCGTATTGTAGCCGTGAAGGGTTGAGGGTGTTGGTGTCGAACTACCTCGGTGGGGAAGCGACTAAGCACAGTACGTATGGAGAAATAGAAGAATTGATCGGAGAAATGGAAGTGGCCCCGGCAGAGATAGCAGAAGAGCTAATGAAGGGGGAGGAGACGGAGGCGGTTCTTGGGGGACTGGTGGGTTTTCTGAAACGTAAAAGAGAAGAAGAGAGGAAGGAGAAAGAGGAGAAGAAAGAAGAGAAAGGAGAAGAAGAAGAAAAAGTAGAAGAAGAAGAAGAAGAAGGGGATAAAATAGTAGAAGAAGAAGAGGCAACGAAGAAGACAAACTGGGAATTGAGAAATAGAGTGAGAAGAACTGGATATGGATATAGAGGACGTGGGCGAGGGCGTGGGTTCACTCGGCGAATACCGATGTGA
Protein Sequence
- >Csa_6G504460
MNFKDMAVPQSVSALFSAYASFATTMMLIRSLTNELLPAKLISFSSIFVYFFGSISSQTKLVIEENSGFAMNEVFQAAEFYLRTKISPSIDTLKVTKTPRQKKVTLSIDKDQEIIDYFENIRLQWRFLCSVDERNGGGSREKRQFELSFPKKFRDRIVDFYLPYVLRRAKEIKEENKVVKIFSQECQYDDDSGGNWGSVNLEHPATFDTLAMDPELKQSIIEDLDRFVRRKDFYKKVGKAWKRGYLLEGPPGTGKSSLIAAMANYLKFDIYDLDLTNMYSNSDLRRVLLATTNRSILVIEDIDCSVQIQNRQSEEHFDQSSSKFTLSGMLNFIDGLWSSCGDERIIIFTTNNKHRLDPALLRAGRMDMHINMSYCSREGLRVLVSNYLGGEATKHSTYGEIEELIGEMEVAPAEIAEELMKGEETEAVLGGLVGFLKRKREEERKEKEEKKEEKGEEEEKVEEEEEEGDKIVEEEEATKKTNWELRNRVRRTGYGYRGRGRGRGFTRRIPM