Information report for CsGH3.6
Gene Details
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Functional Descriptions
- miRNA_157-CsCuRX, miRNA_411-CsGH3.6, and miRNA_161/297/257-CsHD-Zip might be responsible for corolla opening in the super ovary in cucumber.
- In this study, GH3.6 (Csa3G088930) was highly up-regulated at the green-yellow bud stage, suggesting that the IAA level was high, and miRNA_411 regulated GH3.6 by IAA conjugation to control the auxin homoeostasis during corolla development in the cucumber super ovaries.
- In addition, the expression patterns of miRNA_104, miRNA_157, miRNA_349, miRNA_242, and miRNA_98 were similar during corolla development, and they shared the same target gene, CsCuRX.
Functional Keywords
- development , auxin , iaa
Literature and News
Gene Resources
- NCBI ID: 101212260
- UniProt accessions: A0A0A0L7R7
Sequences
cDNA Sequence
- >Csa_3G088930
ATGCCTGAAGCACCAAAACCAAGTACTCAAAATTACAACCAGCTTCTTCAAAAAAACAAAGCCATTCTTCAATTCATTGAAGATGTCACCACCAACGCTGCTCTTGTCCAACGCCAAGTCCTCTCTCAAATCCTCTCCCAAAACTCCAACTCCGAGTACTTAACTCTCTATGGTCGCCCCTCTTCCGACACCTTCAAAACCTCCATCCCTCTCGTCTCTTATGACCAAATCCAACCCTTCGTCTCTCGTATTGCCAATGGCGATTTCTCCCCTATTCTATGCTCCTCTCCCATCTCCGAATTCTTAACCAGCTCTGGCACTTCGGGTGGCGAGAGAAAGCTGATGCCCACAATCGAGGAGGAGTTGGACAGACGATCATTGTTGTATAGCTTGTTGATGCCTGTGATGACTCAATTCGTTCCTGGCTTAGAAAAGGGTAAAGGAATGTACTTTTTGTTTATTAAAGCTGAGGCTAAAACCCCTGGTGGCTTACTCGCTCGCCCCGTTTTAACTAGCTACTACAAGAGCTCTCATTTTAAGGAACGTCCTTATGATCCTTACACCAATTACACCAGCCCCAATGAAGCCATTCTTTGCCCTGACTCCTATCAAAGCATGTACGCTCAATTGCTATGTGGTCTTTGTCATCGTCTCGACGTTCTTCGCGTCGGTGCTGTTTTTGCCTCTGGTTTCATTCGTGCTATTCGCTTTCTTGAAAAGCACTGGCAACTTCTCTGCCATGATATCCGCACTGGGACGCTGAATTCCCAGATCACGGACCAAGCGGTTCGTGATGCAGTGATGTCATCGGTGCTACGTGGGCCAGATCCTGAGTTGGCGGATTATGTTCATGGAGAGTGTTGTAAGGGATGGTGGCAGGGAATTATTACGAGGTTGTGGCCGAATACGAAATACGTGGATGTGATTGTTACCGGGACAATGTCACAGTATATTACGACGCTGGATTATTATAGCAATGGATTGCCTTTGGTTTGTACTATGTATGCTTCTTCAGAGTGTTATTTTGGTGTTAATCTTAACCCTCTTTGTAAACCAAGTGAAGTTGCTTATACTCTCATTCCTTCCATGGCATATTTTGAGTTTCTTCCTGTTGAAAGAAGCCACATCAACGATGACAACTCCCTCAATGAACAACAGCTTGTCGATCTAACCGACGTTGAACTCGGTAAAGAATATGAGCTCGTCGTCACGACTTACGCCGGACTTTATCGATATCGAGTGGGTGACATCCTAAGAGTAGCGGGATTCAAAAACAAAGCTCCACAATTCAACTTCATATGTCGAAAGAACGTGGTTCTAAGCATCGATTCTGATAAAACCGATGAAGTAGAGCTTCAAAACGCAGTGAAGAACTCGGTGAACAATTTAATGCCATTCGAGGCAACATTGGCGGAGTACACAAGCTATGCCAACACTTCAACAATTCCAGGTCACTACGTGTTATATTGGGAGCTAAACCAGAAGGAGGGGGCAGCGACACCGGTGCCGCCGTCCGTGTTGGAAGATTGTTGTCTTACGATTGAGGAGTCATTGAACAGCGTATATAGGCAGGGGCGAGTATCAGACAAGTCAATTGGGCCACTGGAAATCAAGGTTGTGGAAAATGGGACATTTGATAAGCTGATGGATTATGCTATAAGCATGGGAGCTTCAATAAATCAGTACAAAACCCCACGGTGTGTGAAGTTTCAACCCATTGTTGAGCTTTTGAACTCAAGAGTTGTGGGTTCTTATTTCAGCCCTAAGTGCCCAAAGTGGGTACCTGGTCATAAGCAATGGTCCCAACAAGATTAGTTCCTTAATTTTCTTAATATTCTTCAATGGCTTATTGTACCCTCTTGGTTTTTCCCCTCTCAAATAATCTGTATGGCTCTTCTCATCATGATCATCTTAATTAGTACTAATGTACTAGGCAATTCTCATCTTTTTTCATAGCTTCTAATTTTTCTTGTTGGGATATATTAGACCCTTTTTCTATCCCATTATG
CDS Sequence
- >Csa_3G088930
ATGCCTGAAGCACCAAAACCAAGTACTCAAAATTACAACCAGCTTCTTCAAAAAAACAAAGCCATTCTTCAATTCATTGAAGATGTCACCACCAACGCTGCTCTTGTCCAACGCCAAGTCCTCTCTCAAATCCTCTCCCAAAACTCCAACTCCGAGTACTTAACTCTCTATGGTCGCCCCTCTTCCGACACCTTCAAAACCTCCATCCCTCTCGTCTCTTATGACCAAATCCAACCCTTCGTCTCTCGTATTGCCAATGGCGATTTCTCCCCTATTCTATGCTCCTCTCCCATCTCCGAATTCTTAACCAGCTCTGGCACTTCGGGTGGCGAGAGAAAGCTGATGCCCACAATCGAGGAGGAGTTGGACAGACGATCATTGTTGTATAGCTTGTTGATGCCTGTGATGACTCAATTCGTTCCTGGCTTAGAAAAGGGTAAAGGAATGTACTTTTTGTTTATTAAAGCTGAGGCTAAAACCCCTGGTGGCTTACTCGCTCGCCCCGTTTTAACTAGCTACTACAAGAGCTCTCATTTTAAGGAACGTCCTTATGATCCTTACACCAATTACACCAGCCCCAATGAAGCCATTCTTTGCCCTGACTCCTATCAAAGCATGTACGCTCAATTGCTATGTGGTCTTTGTCATCGTCTCGACGTTCTTCGCGTCGGTGCTGTTTTTGCCTCTGGTTTCATTCGTGCTATTCGCTTTCTTGAAAAGCACTGGCAACTTCTCTGCCATGATATCCGCACTGGGACGCTGAATTCCCAGATCACGGACCAAGCGGTTCGTGATGCAGTGATGTCATCGGTGCTACGTGGGCCAGATCCTGAGTTGGCGGATTATGTTCATGGAGAGTGTTGTAAGGGATGGTGGCAGGGAATTATTACGAGGTTGTGGCCGAATACGAAATACGTGGATGTGATTGTTACCGGGACAATGTCACAGTATATTACGACGCTGGATTATTATAGCAATGGATTGCCTTTGGTTTGTACTATGTATGCTTCTTCAGAGTGTTATTTTGGTGTTAATCTTAACCCTCTTTGTAAACCAAGTGAAGTTGCTTATACTCTCATTCCTTCCATGGCATATTTTGAGTTTCTTCCTGTTGAAAGAAGCCACATCAACGATGACAACTCCCTCAATGAACAACAGCTTGTCGATCTAACCGACGTTGAACTCGGTAAAGAATATGAGCTCGTCGTCACGACTTACGCCGGACTTTATCGATATCGAGTGGGTGACATCCTAAGAGTAGCGGGATTCAAAAACAAAGCTCCACAATTCAACTTCATATGTCGAAAGAACGTGGTTCTAAGCATCGATTCTGATAAAACCGATGAAGTAGAGCTTCAAAACGCAGTGAAGAACTCGGTGAACAATTTAATGCCATTCGAGGCAACATTGGCGGAGTACACAAGCTATGCCAACACTTCAACAATTCCAGGTCACTACGTGTTATATTGGGAGCTAAACCAGAAGGAGGGGGCAGCGACACCGGTGCCGCCGTCCGTGTTGGAAGATTGTTGTCTTACGATTGAGGAGTCATTGAACAGCGTATATAGGCAGGGGCGAGTATCAGACAAGTCAATTGGGCCACTGGAAATCAAGGTTGTGGAAAATGGGACATTTGATAAGCTGATGGATTATGCTATAAGCATGGGAGCTTCAATAAATCAGTACAAAACCCCACGGTGTGTGAAGTTTCAACCCATTGTTGAGCTTTTGAACTCAAGAGTTGTGGGTTCTTATTTCAGCCCTAAGTGCCCAAAGTGGGTACCTGGTCATAAGCAATGGTCCCAACAAGATTAG
Protein Sequence
- >Csa_3G088930
MPEAPKPSTQNYNQLLQKNKAILQFIEDVTTNAALVQRQVLSQILSQNSNSEYLTLYGRPSSDTFKTSIPLVSYDQIQPFVSRIANGDFSPILCSSPISEFLTSSGTSGGERKLMPTIEEELDRRSLLYSLLMPVMTQFVPGLEKGKGMYFLFIKAEAKTPGGLLARPVLTSYYKSSHFKERPYDPYTNYTSPNEAILCPDSYQSMYAQLLCGLCHRLDVLRVGAVFASGFIRAIRFLEKHWQLLCHDIRTGTLNSQITDQAVRDAVMSSVLRGPDPELADYVHGECCKGWWQGIITRLWPNTKYVDVIVTGTMSQYITTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVAYTLIPSMAYFEFLPVERSHINDDNSLNEQQLVDLTDVELGKEYELVVTTYAGLYRYRVGDILRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKNSVNNLMPFEATLAEYTSYANTSTIPGHYVLYWELNQKEGAATPVPPSVLEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKVVENGTFDKLMDYAISMGASINQYKTPRCVKFQPIVELLNSRVVGSYFSPKCPKWVPGHKQWSQQD