Gene Details:

Functional Descriptions:

  • miRNA_157-CsCuRX, miRNA_411-CsGH3.6, and miRNA_161/297/257-CsHD-Zip might be responsible for corolla opening in the super ovary in cucumber.
  • In this study, GH3.6 (Csa3G088930) was highly up-regulated at the green-yellow bud stage, suggesting that the IAA level was high, and miRNA_411 regulated GH3.6 by IAA conjugation to control the auxin homoeostasis during corolla development in the cucumber super ovaries.
  • In addition, the expression patterns of miRNA_104, miRNA_157, miRNA_349, miRNA_242, and miRNA_98 were similar during corolla development, and they shared the same target gene, CsCuRX.

Literature:

Gene Resources:

Orthologs:

Sequences:

cDNA Sequence
  • >Csa_3G088930
    ATGCCTGAAGCACCAAAACCAAGTACTCAAAATTACAACCAGCTTCTTCAAAAAAACAAAGCCATTCTTCAATTCATTGAAGATGTCACCACCAACGCTGCTCTTGTCCAACGCCAAGTCCTCTCTCAAATCCTCTCCCAAAACTCCAACTCCGAGTACTTAACTCTCTATGGTCGCCCCTCTTCCGACACCTTCAAAACCTCCATCCCTCTCGTCTCTTATGACCAAATCCAACCCTTCGTCTCTCGTATTGCCAATGGCGATTTCTCCCCTATTCTATGCTCCTCTCCCATCTCCGAATTCTTAACCAGCTCTGGCACTTCGGGTGGCGAGAGAAAGCTGATGCCCACAATCGAGGAGGAGTTGGACAGACGATCATTGTTGTATAGCTTGTTGATGCCTGTGATGACTCAATTCGTTCCTGGCTTAGAAAAGGGTAAAGGAATGTACTTTTTGTTTATTAAAGCTGAGGCTAAAACCCCTGGTGGCTTACTCGCTCGCCCCGTTTTAACTAGCTACTACAAGAGCTCTCATTTTAAGGAACGTCCTTATGATCCTTACACCAATTACACCAGCCCCAATGAAGCCATTCTTTGCCCTGACTCCTATCAAAGCATGTACGCTCAATTGCTATGTGGTCTTTGTCATCGTCTCGACGTTCTTCGCGTCGGTGCTGTTTTTGCCTCTGGTTTCATTCGTGCTATTCGCTTTCTTGAAAAGCACTGGCAACTTCTCTGCCATGATATCCGCACTGGGACGCTGAATTCCCAGATCACGGACCAAGCGGTTCGTGATGCAGTGATGTCATCGGTGCTACGTGGGCCAGATCCTGAGTTGGCGGATTATGTTCATGGAGAGTGTTGTAAGGGATGGTGGCAGGGAATTATTACGAGGTTGTGGCCGAATACGAAATACGTGGATGTGATTGTTACCGGGACAATGTCACAGTATATTACGACGCTGGATTATTATAGCAATGGATTGCCTTTGGTTTGTACTATGTATGCTTCTTCAGAGTGTTATTTTGGTGTTAATCTTAACCCTCTTTGTAAACCAAGTGAAGTTGCTTATACTCTCATTCCTTCCATGGCATATTTTGAGTTTCTTCCTGTTGAAAGAAGCCACATCAACGATGACAACTCCCTCAATGAACAACAGCTTGTCGATCTAACCGACGTTGAACTCGGTAAAGAATATGAGCTCGTCGTCACGACTTACGCCGGACTTTATCGATATCGAGTGGGTGACATCCTAAGAGTAGCGGGATTCAAAAACAAAGCTCCACAATTCAACTTCATATGTCGAAAGAACGTGGTTCTAAGCATCGATTCTGATAAAACCGATGAAGTAGAGCTTCAAAACGCAGTGAAGAACTCGGTGAACAATTTAATGCCATTCGAGGCAACATTGGCGGAGTACACAAGCTATGCCAACACTTCAACAATTCCAGGTCACTACGTGTTATATTGGGAGCTAAACCAGAAGGAGGGGGCAGCGACACCGGTGCCGCCGTCCGTGTTGGAAGATTGTTGTCTTACGATTGAGGAGTCATTGAACAGCGTATATAGGCAGGGGCGAGTATCAGACAAGTCAATTGGGCCACTGGAAATCAAGGTTGTGGAAAATGGGACATTTGATAAGCTGATGGATTATGCTATAAGCATGGGAGCTTCAATAAATCAGTACAAAACCCCACGGTGTGTGAAGTTTCAACCCATTGTTGAGCTTTTGAACTCAAGAGTTGTGGGTTCTTATTTCAGCCCTAAGTGCCCAAAGTGGGTACCTGGTCATAAGCAATGGTCCCAACAAGATTAGTTCCTTAATTTTCTTAATATTCTTCAATGGCTTATTGTACCCTCTTGGTTTTTCCCCTCTCAAATAATCTGTATGGCTCTTCTCATCATGATCATCTTAATTAGTACTAATGTACTAGGCAATTCTCATCTTTTTTCATAGCTTCTAATTTTTCTTGTTGGGATATATTAGACCCTTTTTCTATCCCATTATG
CDS Sequence
  • >Csa_3G088930
    ATGCCTGAAGCACCAAAACCAAGTACTCAAAATTACAACCAGCTTCTTCAAAAAAACAAAGCCATTCTTCAATTCATTGAAGATGTCACCACCAACGCTGCTCTTGTCCAACGCCAAGTCCTCTCTCAAATCCTCTCCCAAAACTCCAACTCCGAGTACTTAACTCTCTATGGTCGCCCCTCTTCCGACACCTTCAAAACCTCCATCCCTCTCGTCTCTTATGACCAAATCCAACCCTTCGTCTCTCGTATTGCCAATGGCGATTTCTCCCCTATTCTATGCTCCTCTCCCATCTCCGAATTCTTAACCAGCTCTGGCACTTCGGGTGGCGAGAGAAAGCTGATGCCCACAATCGAGGAGGAGTTGGACAGACGATCATTGTTGTATAGCTTGTTGATGCCTGTGATGACTCAATTCGTTCCTGGCTTAGAAAAGGGTAAAGGAATGTACTTTTTGTTTATTAAAGCTGAGGCTAAAACCCCTGGTGGCTTACTCGCTCGCCCCGTTTTAACTAGCTACTACAAGAGCTCTCATTTTAAGGAACGTCCTTATGATCCTTACACCAATTACACCAGCCCCAATGAAGCCATTCTTTGCCCTGACTCCTATCAAAGCATGTACGCTCAATTGCTATGTGGTCTTTGTCATCGTCTCGACGTTCTTCGCGTCGGTGCTGTTTTTGCCTCTGGTTTCATTCGTGCTATTCGCTTTCTTGAAAAGCACTGGCAACTTCTCTGCCATGATATCCGCACTGGGACGCTGAATTCCCAGATCACGGACCAAGCGGTTCGTGATGCAGTGATGTCATCGGTGCTACGTGGGCCAGATCCTGAGTTGGCGGATTATGTTCATGGAGAGTGTTGTAAGGGATGGTGGCAGGGAATTATTACGAGGTTGTGGCCGAATACGAAATACGTGGATGTGATTGTTACCGGGACAATGTCACAGTATATTACGACGCTGGATTATTATAGCAATGGATTGCCTTTGGTTTGTACTATGTATGCTTCTTCAGAGTGTTATTTTGGTGTTAATCTTAACCCTCTTTGTAAACCAAGTGAAGTTGCTTATACTCTCATTCCTTCCATGGCATATTTTGAGTTTCTTCCTGTTGAAAGAAGCCACATCAACGATGACAACTCCCTCAATGAACAACAGCTTGTCGATCTAACCGACGTTGAACTCGGTAAAGAATATGAGCTCGTCGTCACGACTTACGCCGGACTTTATCGATATCGAGTGGGTGACATCCTAAGAGTAGCGGGATTCAAAAACAAAGCTCCACAATTCAACTTCATATGTCGAAAGAACGTGGTTCTAAGCATCGATTCTGATAAAACCGATGAAGTAGAGCTTCAAAACGCAGTGAAGAACTCGGTGAACAATTTAATGCCATTCGAGGCAACATTGGCGGAGTACACAAGCTATGCCAACACTTCAACAATTCCAGGTCACTACGTGTTATATTGGGAGCTAAACCAGAAGGAGGGGGCAGCGACACCGGTGCCGCCGTCCGTGTTGGAAGATTGTTGTCTTACGATTGAGGAGTCATTGAACAGCGTATATAGGCAGGGGCGAGTATCAGACAAGTCAATTGGGCCACTGGAAATCAAGGTTGTGGAAAATGGGACATTTGATAAGCTGATGGATTATGCTATAAGCATGGGAGCTTCAATAAATCAGTACAAAACCCCACGGTGTGTGAAGTTTCAACCCATTGTTGAGCTTTTGAACTCAAGAGTTGTGGGTTCTTATTTCAGCCCTAAGTGCCCAAAGTGGGTACCTGGTCATAAGCAATGGTCCCAACAAGATTAG
Protein Sequence
  • >Csa_3G088930
    MPEAPKPSTQNYNQLLQKNKAILQFIEDVTTNAALVQRQVLSQILSQNSNSEYLTLYGRPSSDTFKTSIPLVSYDQIQPFVSRIANGDFSPILCSSPISEFLTSSGTSGGERKLMPTIEEELDRRSLLYSLLMPVMTQFVPGLEKGKGMYFLFIKAEAKTPGGLLARPVLTSYYKSSHFKERPYDPYTNYTSPNEAILCPDSYQSMYAQLLCGLCHRLDVLRVGAVFASGFIRAIRFLEKHWQLLCHDIRTGTLNSQITDQAVRDAVMSSVLRGPDPELADYVHGECCKGWWQGIITRLWPNTKYVDVIVTGTMSQYITTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVAYTLIPSMAYFEFLPVERSHINDDNSLNEQQLVDLTDVELGKEYELVVTTYAGLYRYRVGDILRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKNSVNNLMPFEATLAEYTSYANTSTIPGHYVLYWELNQKEGAATPVPPSVLEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKVVENGTFDKLMDYAISMGASINQYKTPRCVKFQPIVELLNSRVVGSYFSPKCPKWVPGHKQWSQQD