Gene Details:

Functional Descriptions:

  • Based on the genome variation of CsLOX08, we developed an InDel marker. Genotyping of InDel markers was consistent with the content of (E,Z)-2,6-nonadien-1-ol in RILs, which were also verified in nine cucumber inbred lines.
  • An InDel marker was developed based on the genome variation of CsLOX08, and the InDel marker could genotype the high and low (E,Z)-2,6-nonadien-1-ol content individuals in cucumber fruits, which will provide cucumber breeders with some basis for molecular breeding.
  • The amino acid variation of CsLOX08 protein in Q24 may lead to a change in lipoxygenase enzyme activity.

Literature:

Gene Resources:

Orthologs:

Sequences:

cDNA Sequence
  • >Csa_2G023850
    ATGGTGTACAACAAAAACATATACTATTTATCAAAAGAGGATAAGACTGCATGGAGTAGTGATGAAGAATTTGCAAGAGAAATGTTGGCTGGAGTTAATCCAGTACTCATTGCTCGACTTGATGAATTTCCACCTAAAAGCACATTGGACACTAACATTTATGGTGATCAAACAAGCAAAATAACTGAAGAACACATAAAAGATGGCTTAGATGGACTCACTGTGAATGAGAAGATTATCCATATGCTGTTGATGGTCTTGAGATTTGGTCAGCAATCAAAGCATGGCCGTCGATTCCTACCTGAAAGTGGTACTCCTGACTACAAAGAGCTCGAGTCAAACCCCGAGAAGGCGTTCTTGAGAACAATCACTTCACAGTTGCAAGCCCTTGTGGGGGTGTCAGTTATTGAGATATTGTCAAGACATTCTTCAGATGAAGTTTATTTAGGGCAAAGAAGTAACCCTGAGTGGACTTTGGATAAGGAAGCTTTGGAAGCATTTGAGAAGTTTGGGGAAAAGTTGGGTGAAATTGAAAAGAAAATAGCTATGAGAAATAAAGATCCTCAATTGAAAAATAGAGTTGGGCCAGTGGATATGCCATATACTTTGTTGTTTCCTACAAGTTCTGAAGGCCTCACAGGTAGAGGAATTCCTAATAGCATTTCCATTTAAATGAAACCTTAGGGTTTCATTATTTCATTTTATCAAGTGACGAACGTTACAGGTTGTCGAATAATACTCGGTACATCTTAGTTTATATATATATATGCATCTTTTTGCAGCTCACTTCAACTCGTCCAATGAGTGAGCTGTAAAAGAACAAGTGCAATCTAAGATACCCCA
CDS Sequence
  • >Csa_2G023850
    ATGGTGTACAACAAAAACATATACTATTTATCAAAAGAGGATAAGACTGCATGGAGTAGTGATGAAGAATTTGCAAGAGAAATGTTGGCTGGAGTTAATCCAGTACTCATTGCTCGACTTGATGAATTTCCACCTAAAAGCACATTGGACACTAACATTTATGGTGATCAAACAAGCAAAATAACTGAAGAACACATAAAAGATGGCTTAGATGGACTCACTGTGAATGAGAAGATTATCCATATGCTGTTGATGGTCTTGAGATTTGGTCAGCAATCAAAGCATGGCCGTCGATTCCTACCTGAAAGTGGTACTCCTGACTACAAAGAGCTCGAGTCAAACCCCGAGAAGGCGTTCTTGAGAACAATCACTTCACAGTTGCAAGCCCTTGTGGGGGTGTCAGTTATTGAGATATTGTCAAGACATTCTTCAGATGAAGTTTATTTAGGGCAAAGAAGTAACCCTGAGTGGACTTTGGATAAGGAAGCTTTGGAAGCATTTGAGAAGTTTGGGGAAAAGTTGGGTGAAATTGAAAAGAAAATAGCTATGAGAAATAAAGATCCTCAATTGAAAAATAGAGTTGGGCCAGTGGATATGCCATATACTTTGTTGTTTCCTACAAGTTCTGAAGGCCTCACAGGTAGAGGAATTCCTAATAGCATTTCCATTTAA
Protein Sequence
  • >Csa_2G023850
    MVYNKNIYYLSKEDKTAWSSDEEFAREMLAGVNPVLIARLDEFPPKSTLDTNIYGDQTSKITEEHIKDGLDGLTVNEKIIHMLLMVLRFGQQSKHGRRFLPESGTPDYKELESNPEKAFLRTITSQLQALVGVSVIEILSRHSSDEVYLGQRSNPEWTLDKEALEAFEKFGEKLGEIEKKIAMRNKDPQLKNRVGPVDMPYTLLFPTSSEGLTGRGIPNSISI