Information report for CsHLS1
Gene Details
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Functional Descriptions
- CsHLS1-CsSCL28 module regulates compact plant architecture in cucumber.
- The candidate mutation causes a premature stop codon in CsaV3_1G036420, which shares similarity to Arabidopsis HOOKLESS 1 (HLS1) encoding putative histone N-acetyltransferase (HAT) protein and was named CsHLS1.
- Knockout of CsHLS1 resulted in reduces leaf petiole angle and leaf size and as well as decreased acetylation levels.
- CsHLS1 directly interacted with CsSCL28 and negatively regulated compact plant architecture in cucumber.
- CsHLS1 knockout increased the photosynthesis rate and leaf nitrogen in cucumbers, thereby maintaining cucumber yield at normal density.
Functional Keywords
- nitrogen , leaf , photosynthesis , yield , architecture , plant-architecture , leaf-angle , leaf-size , acetyltransferase , protein
Literature and News
Gene Resources
- NCBI ID: 101222130
- UniProt accessions: A0A0A0M0V6
Homologs
- Hordeum vulgare: HvMND1
- Oryza sativa: OsglHAT1;GW6a
Sequences
cDNA Sequence
- >Csa_1G533380
ATATATATATATATATATAGTTTTCCAAAGGAAAAATGGGATGTGAAGAAGAAATTTTGATAATAAGAAGCTATGATGGGCAATCTGCAGATAGAGGTAGAGTGGAAGATCTAGAGAGAAGATGCGAGGTAGGGCCATCTGAAAGAGTTTTTCTCTTCACAGACACTATGGGTGACCCCATTTGTAGGATCAGAAACAGTCCCTTGTACAAGATGCTGGTTGCCGAAGTGGATAACCAGTTGGTTGGTGTGATTCAAGGCTCTATAAAGGTGGTAACTGTTCATCAGGCGCCGAAAGACCGTGCTAAGGTTGGGTATGTTTTAGGCCTTCGTGTTGCGCCGTCGTTTCGCCGTCGAGGGATTGGTTGTAGCCTTGTGCGACGCCTTGAGGAGTGGTTTATGATTAATGATGTAGATTATGCTTATATGGCGACGGAGAAAGACAATGAAGCCTCTGTGAAGTTGTTCATTAACAAGCTTGGATACACTAACTTTAGAGTTCCAGCAATTTTGGTGAACCCGGTGAAACATTACCGATCATATCAACTCCCTTCTAACATCCAGATTGCTCGCCTAAAAGTAGACGTTGCGGAGTTTCTCTACCGAAAATTCATGGCCTCTACTGAGTTTTTCCCCCATGACATTGATCATGTGCTCAAACACAAGCTAAGCCTTGGCACATGGGTTGCTTACTACAAAGATGACGATGTCTCCTCCACCAAATTTGAAACGAACGGTAGCAAGTCGGAGATAACAATACCGAAGAGCTGGGCAATGCTGAGTGTATGGAACAGTGGAGAGGTGTTCAAGCTACGATTGGGGAAGGCACCATTGTCATGTTTGATATATACAGAGAGCTCCAAGGTGATAGACAAGATCTTCCCATGTCTAAAGTTGCCATCAATACCCGATTTCTATGAGCCATTTGGATTCTATTTCATGTATGGGGTTCATCGGGAGGGGACGGGGACAGGGAAGCTGGTGAGAGCGTTGTGCCAATACGTACACAACATGGCGGCTGCAGCAAGGGACTGTAAAGTAATAGTAACAGAGATTGGAGGAGAAGACTCTCTAAGAGAAGAGATTCCACATTGGAAATTGCTGTCATGCCCTGAAGACTTGTGGTGCATAAAGGCATTGAAGAAAGAAGCAAGAAATAGCCTACATGAGTTGACAAAAACCCCACCAACTACAAGACCAGCCCTTTTTGTAGACCCAAGAGAGGTATGATGATCAAAATCATATCAATATTAATAAATCCCAAACTTACTTTAGTTAATCACAAATCACAAACTAAACCAAAATCCAACATATAAATTATAAACTTTCTATCTTTTATGTACATACCAA
CDS Sequence
- >Csa_1G533380
ATGGGATGTGAAGAAGAAATTTTGATAATAAGAAGCTATGATGGGCAATCTGCAGATAGAGGTAGAGTGGAAGATCTAGAGAGAAGATGCGAGGTAGGGCCATCTGAAAGAGTTTTTCTCTTCACAGACACTATGGGTGACCCCATTTGTAGGATCAGAAACAGTCCCTTGTACAAGATGCTGGTTGCCGAAGTGGATAACCAGTTGGTTGGTGTGATTCAAGGCTCTATAAAGGTGGTAACTGTTCATCAGGCGCCGAAAGACCGTGCTAAGGTTGGGTATGTTTTAGGCCTTCGTGTTGCGCCGTCGTTTCGCCGTCGAGGGATTGGTTGTAGCCTTGTGCGACGCCTTGAGGAGTGGTTTATGATTAATGATGTAGATTATGCTTATATGGCGACGGAGAAAGACAATGAAGCCTCTGTGAAGTTGTTCATTAACAAGCTTGGATACACTAACTTTAGAGTTCCAGCAATTTTGGTGAACCCGGTGAAACATTACCGATCATATCAACTCCCTTCTAACATCCAGATTGCTCGCCTAAAAGTAGACGTTGCGGAGTTTCTCTACCGAAAATTCATGGCCTCTACTGAGTTTTTCCCCCATGACATTGATCATGTGCTCAAACACAAGCTAAGCCTTGGCACATGGGTTGCTTACTACAAAGATGACGATGTCTCCTCCACCAAATTTGAAACGAACGGTAGCAAGTCGGAGATAACAATACCGAAGAGCTGGGCAATGCTGAGTGTATGGAACAGTGGAGAGGTGTTCAAGCTACGATTGGGGAAGGCACCATTGTCATGTTTGATATATACAGAGAGCTCCAAGGTGATAGACAAGATCTTCCCATGTCTAAAGTTGCCATCAATACCCGATTTCTATGAGCCATTTGGATTCTATTTCATGTATGGGGTTCATCGGGAGGGGACGGGGACAGGGAAGCTGGTGAGAGCGTTGTGCCAATACGTACACAACATGGCGGCTGCAGCAAGGGACTGTAAAGTAATAGTAACAGAGATTGGAGGAGAAGACTCTCTAAGAGAAGAGATTCCACATTGGAAATTGCTGTCATGCCCTGAAGACTTGTGGTGCATAAAGGCATTGAAGAAAGAAGCAAGAAATAGCCTACATGAGTTGACAAAAACCCCACCAACTACAAGACCAGCCCTTTTTGTAGACCCAAGAGAGGTATGA
Protein Sequence
- >Csa_1G533380
MGCEEEILIIRSYDGQSADRGRVEDLERRCEVGPSERVFLFTDTMGDPICRIRNSPLYKMLVAEVDNQLVGVIQGSIKVVTVHQAPKDRAKVGYVLGLRVAPSFRRRGIGCSLVRRLEEWFMINDVDYAYMATEKDNEASVKLFINKLGYTNFRVPAILVNPVKHYRSYQLPSNIQIARLKVDVAEFLYRKFMASTEFFPHDIDHVLKHKLSLGTWVAYYKDDDVSSTKFETNGSKSEITIPKSWAMLSVWNSGEVFKLRLGKAPLSCLIYTESSKVIDKIFPCLKLPSIPDFYEPFGFYFMYGVHREGTGTGKLVRALCQYVHNMAAAARDCKVIVTEIGGEDSLREEIPHWKLLSCPEDLWCIKALKKEARNSLHELTKTPPTTRPALFVDPREV