Gene Details:
- Gene ID: evm.TU.scaffold_1270.124-Cmo
- Gene Symbol: CmCIB1
- Gene Name: CRYPTOCHROME-INTERACTING bHLH1
- Genome: Chrysanthemum morifolium genome
- Species: Chrysanthemum morifolium
Functional Descriptions:
- The GA-receptor CmGID1B plays an important role in integrating photoperiod information from the CmCIB1-PHR2 complex and plant age from the cmo-miR156-CmSPL3 module to coordinate endogenous GA levels and signal perception.
- CmCIB1 or CmPHR2 regulates the transition time from the juvenile phase to the adult phase in chrysanthemum.
- CmCIB1 interacts with CmPHR2 to regulate CmGID1B expression.
- CmCIB1-PHR2-GIDIB regulate flowering through the aging pathway.
- the CmCIB1-PHR2 complex activates the expression of CmGID1B in response to SDs, thereby regulating the biosynthesis and signal transduction of endogenous GAs and thus enabling the transition from the juvenile stage to the adult and flowering stages by affecting the genes of the aging pathway in chrysanthemum.
Function-related keywords:
- ga , signal-transduction , flowering-time , ga-biosynthesis , flowering , photoperiod-response , photoperiod
Literature:
- PHOTOLYASE/BLUE LIGHT RECEPTOR2 regulates chrysanthemum flowering by compensating for gibberellin perception. DOI: 10.1093/plphys/kiad503 ; PMID: 37723123
Related News:
Gene Resources:
- NCBI ID: OP889329.1
- UniProt accessions:
Orthologs:
Sequences:
cDNA Sequence
- >evm.TU.scaffold_1270.124-Cmo
ATGAGTCACGAATTGCGAAATGACGGCCCGAGTTTGCTTGAGAGACAACAAGCTAGAATG61AAGTGGCAACAACAAAAACAACAAAGTTTTTTTAATGCAAGTGATCATACCATGCAAAAT121ATGTTTAGTACTAGTATGCCACTAGCTCAAACTAATGAAACGTTTTCGGGTTTGTTGAGT181GGCCATAACGGGCTAGATATCGTTAAGCCGGACCCTGGATTAATGGAAGACTGGGCTGGT241TTTGGTGATCATTTGAGCTATGGGTATATGAATCAAAATAATATACCCGTAGGGGCAGAT301CAGTCATTTGTACATGGGAATTCTGTTTCAGTTTCAACTTCTGTTACAGCTTCTGTGTCA361CCTAAGAAAAGGAAAGCTGATAAGGGTCATAGCCTGCAGGTAGTTACTGAAAAAGAAAAG421AAGCTAAAAGGGTGTGCTGAAGAAGGTGATTCCAAAATCACTCATCAAAATAGTAACAAC481AGTGACAAAGCAACAGGTGATAACAAGAGTAGTAACAGCAAAGAAGCTTCTACAAACACT541TCATCTAAGGATAAATCTAAGGTTTCCGAGGTTCAAAAACCGGATTATATTCATGTTCGT601GCACGTCGAGGTCAGGCCACTGACAGTCATAGTTTAGCCGAAAGGGTAAGAAGGGAGAAA661ATTAGTGAGAGAATGAAGTACCTTCAGGATTTAGTCCCGGGGTGTAACAAGATCACAGGG721AAAGCTGGAATGCTTGATGAAATTATTAATTATGTCCAATCCCTTCAAAAGCAAGTAGAG781TTCTTGTCCATGAAGCTTGCTACTGTTAATCCGGAGCTAGATTTCAACATTGATAATGTA841TTCGCGAAAGAGATGTTTCAACCGTCCACAAGCGAATTTCAAGGACTCGGGTGTACTTCA901GAAACGCCTAATCCTGCATATTTTCAATTAAACTCATTGGATCAAGTATATTGTGGACTA961GACATGGGAATTAACTCGGCAGAAATGGCACTAAGAAGAAGTATTACTGCTCCAATGTCG1021ATCCCTGAAACATTTATGGATTCATCTTGTTTCAATCAAATCCAACCAAGTGCTATGTGG1081GATGGTGATTTACAGAATTTGTACAAAATGGAATTTGAACAAGGAACATTGATACCAATT1141CAATCCCATCAATATACAGGTTCAAATGAAGGAAGCAATTTGAAGATGGAAATGTGA
CDS Sequence
- >evm.TU.scaffold_1270.124-Cmo
ATGAGTCACGAATTGCGAAATGACGGCCCGAGTTTGCTTGAGAGACAACAAGCTAGAATG61AAGTGGCAACAACAAAAACAACAAAGTTTTTTTAATGCAAGTGATCATACCATGCAAAAT121ATGTTTAGTACTAGTATGCCACTAGCTCAAACTAATGAAACGTTTTCGGGTTTGTTGAGT181GGCCATAACGGGCTAGATATCGTTAAGCCGGACCCTGGATTAATGGAAGACTGGGCTGGT241TTTGGTGATCATTTGAGCTATGGGTATATGAATCAAAATAATATACCCGTAGGGGCAGAT301CAGTCATTTGTACATGGGAATTCTGTTTCAGTTTCAACTTCTGTTACAGCTTCTGTGTCA361CCTAAGAAAAGGAAAGCTGATAAGGGTCATAGCCTGCAGGTAGTTACTGAAAAAGAAAAG421AAGCTAAAAGGGTGTGCTGAAGAAGGTGATTCCAAAATCACTCATCAAAATAGTAACAAC481AGTGACAAAGCAACAGGTGATAACAAGAGTAGTAACAGCAAAGAAGCTTCTACAAACACT541TCATCTAAGGATAAATCTAAGGTTTCCGAGGTTCAAAAACCGGATTATATTCATGTTCGT601GCACGTCGAGGTCAGGCCACTGACAGTCATAGTTTAGCCGAAAGGGTAAGAAGGGAGAAA661ATTAGTGAGAGAATGAAGTACCTTCAGGATTTAGTCCCGGGGTGTAACAAGATCACAGGG721AAAGCTGGAATGCTTGATGAAATTATTAATTATGTCCAATCCCTTCAAAAGCAAGTAGAG781TTCTTGTCCATGAAGCTTGCTACTGTTAATCCGGAGCTAGATTTCAACATTGATAATGTA841TTCGCGAAAGAGATGTTTCAACCGTCCACAAGCGAATTTCAAGGACTCGGGTGTACTTCA901GAAACGCCTAATCCTGCATATTTTCAATTAAACTCATTGGATCAAGTATATTGTGGACTA961GACATGGGAATTAACTCGGCAGAAATGGCACTAAGAAGAAGTATTACTGCTCCAATGTCG1021ATCCCTGAAACATTTATGGATTCATCTTGTTTCAATCAAATCCAACCAAGTGCTATGTGG1081GATGGTGATTTACAGAATTTGTACAAAATGGAATTTGAACAAGGAACATTGATACCAATT1141CAATCCCATCAATATACAGGTTCAAATGAAGGAAGCAATTTGAAGATGGAAATGTGA
Protein Sequence
- >evm.TU.scaffold_1270.124-Cmo
MSHELRNDGPSLLERQQARMKWQQQKQQSFFNASDHTMQNMFSTSMPLAQTNETFSGLLSGHNGLDIVKPDPGLMEDWAGFGDHLSYGYMNQNNIPVGADQSFVHGNSVSVSTSVTASVSPKKRKADKGHSLQVVTEKEKKLKGCAEEGDSKITHQNSNNSDKATGDNKSSNSKEASTNTSSKDKSKVSEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQVEFLSMKLATVNPELDFNIDNVFAKEMFQPSTSEFQGLGCTSETPNPAYFQLNSLDQVYCGLDMGINSAEMALRRSITAPMSIPETFMDSSCFNQIQPSAMWDGDLQNLYKMEFEQGTLIPIQSHQYTGSNEGSNLKMEM