Gene Details:
- Gene ID: BnaC06g08390D
- Gene Symbol: BnaTT1.C06
- Gene Name:
- Genome: B. napus reference genome Darmor v4.1
- Species: Brassica napus
Functional Descriptions:
- BnaTT1 genes functions of the flavonoid biosynthesis pathway in rapeseed.
- Gene expression analysis revealed that most of BnaTT mutations resulted in the down-regulation of key genes related to flavonoid and lignin synthesis, and the up-regulation of key genes related to lipid synthesis and oil body formation, which may contribute to the phenotype.
- BnaTT genes exhibit functional differentiation in pigment accumulation in the seed coat.
Function-related keywords:
- seed , flavonoid , lignin , lignin-biosynthesis , seed-phenotype , flavonoid-biosynthesis , pigment-biosynthesis
Literature:
- Targeted mutagenesis of flavonoid biosynthesis pathway genes reveals functional divergence in seed coat colour, oil content and fatty acid composition in Brassica napus L. DOI: 10.1111/pbi.14197 ; PMID: 37856327
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >BnaC06g08390D
ATGGATTGCGAGATCTACTCAAGCTCTTCTTCTGAAAATCCTAGAGACCACTTCCAATTCCTTGATCTCTTTCCTAACATCACTCAAAACCCTAATAACAACAATACCCTAATCGAACCTTTACCGCTTATCGATAGGATCAACTTAAACCCAAACCTAAACCTAAAATCGAGGCCATCGTATGTTGGCGAAGGAGATGACGAGGTAGAAGATGAAGAGAACGTTGTAGTGGATGTGAGCTTACACATCGGCCTTCCTGGTTCCGGTAATTCAAGCAATGGGAAAGAGATCGTCACTTACGATGCCGGAAAAGACATTGAAAATGAAGTTTCCGGCAAGGCATATTGGATTCCGACGGTGGATCAAATTATAATAGGCTTCACTCATTTTTCTTGCCATGTATGCTTCAAGACATTCAATCGCTACAACAATCTTCAGATGCACATGTGGGGCCACGGTTCACAATACAGGAAAGGACCAGAGTCACTGAAAGGGACTCAGCCAAGAGCCATGCTAGGCATCCCTTGTTTCTGCTGCGTTGAAGGGTGCAGGAACCACATCGATCATCCTCGGTCCAAGCCACTCAAAGACTTCCGAACGCTCCAAACGCACTATAAGCGCAAACACGGCCAAAAACCTTATGCGTGTCGCATTTGCGGTAAGCTCTTGGCAGTTAAGGGAGATTGGCGAACTCACGAGAAGAACTGTGGGAAACGTTGGGTTTGTGTTTGCGGTTCCGATTTTAAACACAAACGCTCCCTTAAAGACCATGTTAAGGCTTTTGGACCTGGTCATGGGTCTTATCCGACCGATTTGTTTGATGAGCACGCCTCATACTCTTCTGTCTCTGAAACGCTCTTTTAA
CDS Sequence
- >BnaC06g08390D
ATGGATTGCGAGATCTACTCAAGCTCTTCTTCTGAAAATCCTAGAGACCACTTCCAATTCCTTGATCTCTTTCCTAACATCACTCAAAACCCTAATAACAACAATACCCTAATCGAACCTTTACCGCTTATCGATAGGATCAACTTAAACCCAAACCTAAACCTAAAATCGAGGCCATCGTATGTTGGCGAAGGAGATGACGAGGTAGAAGATGAAGAGAACGTTGTAGTGGATGTGAGCTTACACATCGGCCTTCCTGGTTCCGGTAATTCAAGCAATGGGAAAGAGATCGTCACTTACGATGCCGGAAAAGACATTGAAAATGAAGTTTCCGGCAAGGCATATTGGATTCCGACGGTGGATCAAATTATAATAGGCTTCACTCATTTTTCTTGCCATGTATGCTTCAAGACATTCAATCGCTACAACAATCTTCAGATGCACATGTGGGGCCACGGTTCACAATACAGGAAAGGACCAGAGTCACTGAAAGGGACTCAGCCAAGAGCCATGCTAGGCATCCCTTGTTTCTGCTGCGTTGAAGGGTGCAGGAACCACATCGATCATCCTCGGTCCAAGCCACTCAAAGACTTCCGAACGCTCCAAACGCACTATAAGCGCAAACACGGCCAAAAACCTTATGCGTGTCGCATTTGCGGTAAGCTCTTGGCAGTTAAGGGAGATTGGCGAACTCACGAGAAGAACTGTGGGAAACGTTGGGTTTGTGTTTGCGGTTCCGATTTTAAACACAAACGCTCCCTTAAAGACCATGTTAAGGCTTTTGGACCTGGTCATGGGTCTTATCCGACCGATTTGTTTGATGAGCACGCCTCATACTCTTCTGTCTCTGAAACGCTCTTTTAA
Protein Sequence
- >BnaC06g08390D
MDCEIYSSSSSENPRDHFQFLDLFPNITQNPNNNNTLIEPLPLIDRINLNPNLNLKSRPSYVGEGDDEVEDEENVVVDVSLHIGLPGSGNSSNGKEIVTYDAGKDIENEVSGKAYWIPTVDQIIIGFTHFSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQPRAMLGIPCFCCVEGCRNHIDHPRSKPLKDFRTLQTHYKRKHGQKPYACRICGKLLAVKGDWRTHEKNCGKRWVCVCGSDFKHKRSLKDHVKAFGPGHGSYPTDLFDEHASYSSVSETLF