Gene Details:
- Gene ID: BnaC06g29530D
- Gene Symbol: BnC06.IDA|BnaIDA-C06
- Gene Name: Inflorescence Deficient in Abscission6
- Genome:
- Species: Brassica napus
Functional Descriptions:
- BnC06.IDA|BnaIDA-C06 and BnA07.IDA share a highly conserved amino-acid sequence and exhibit 76.9% sequence similarity to AtIDA.
- Transcriptomic analysis revealed that BnC06.IDA|BnaIDA-C06 and BnA07.IDA were preferentially expressed in the floral abscission zone (AZ), and in other floral organs, including petals, sepals, and filaments.
- Our results suggest a role for BnC06.IDA|BnaIDA-C06 and BnA07.IDA in determining the fate of floral organ abscission.
- In summary, our results demonstrate that BnA07.IDA and BnC06.IDA|BnaIDA-C06 are functionally redundant and are involved in the regulation of floral abscission in OSR.
- This suggests that BnaIDA-A07 and BnC06.IDA|BnaIDA-C06 may be involved in floral organ abscission in B. napus.
- This result suggests that BnaIDA-A07 and BnC06.IDA|BnaIDA-C06 play a crucial role in silique dehiscence.
- Therefore, important agronomic traits were unaffected by the simultaneous knock out of BnaIDA-A07 and BnC06.IDA|BnaIDA-C06 genes in B. napus.
Function-related keywords:
Literature:
- Generating an oilseed rape mutant with non-abscising floral organs using CRISPR/Cas9 technology. DOI: 10.1093/plphys/kiac364 ; PMID: 35951752
- CRISPR-mediated BnaIDA editing prevents silique shattering, floral organ abscission, and spreading of Sclerotinia sclerotiorum in Brassica napus. DOI: 10.1016/j.xplc.2022.100452 ; PMID: 36127875
Related News:
Gene Resources:
- NCBI ID:
- UniProt accessions: A0A078E3R5
Orthologs:
Sequences:
cDNA Sequence
- >BnaC06g29530D
ATGGCTCCGTGTCGTACGATGGTTCTGCTCTGTCTGGTTCTGTTTCTGGCGGCGAGTAGCTCTTCTTATGTGGCCGCTGCAAGAATTGGAGCCACCGTGGAGATGAAGAATAGGAAGAGCTTAGGGTTTAAAGACAGCCTTATTTCTGGTTACTTGCCCAAAGGTGTTCCCATTCCTCCTTCTGCCCCTTCGAAGAGACACAACTCTCTTATTGACTCTCATCCTCATTGA - >BnaC06g29530D
ATGGCTCCGTGTCGTACGATGGTTCTGCTCTGTCTGGTTCTGTTTCTGGCGGCGAGTAGCTCTTCTTATGTGGCCGCTGCAAGAATTGGAGCCACCGTGGAGATGAAGAATAGGAAGAGCTTAGGGTTTAAAGACAGCCTTATTTCTGGTTACTTGCCCAAAGGTGTTCCCATTCCTCCTTCTGCCCCTTCGAAGAGACACAACTCTCTTATTGACTCTCATCCTCATTGA
CDS Sequence
- >BnaC06g29530D
ATGGCTCCGTGTCGTACGATGGTTCTGCTCTGTCTGGTTCTGTTTCTGGCGGCGAGTAGCTCTTCTTATGTGGCCGCTGCAAGAATTGGAGCCACCGTGGAGATGAAGAATAGGAAGAGCTTAGGGTTTAAAGACAGCCTTATTTCTGGTTACTTGCCCAAAGGTGTTCCCATTCCTCCTTCTGCCCCTTCGAAGAGACACAACTCTCTTATTGACTCTCATCCTCATTGA - >BnaC06g29530D
ATGGCTCCGTGTCGTACGATGGTTCTGCTCTGTCTGGTTCTGTTTCTGGCGGCGAGTAGCTCTTCTTATGTGGCCGCTGCAAGAATTGGAGCCACCGTGGAGATGAAGAATAGGAAGAGCTTAGGGTTTAAAGACAGCCTTATTTCTGGTTACTTGCCCAAAGGTGTTCCCATTCCTCCTTCTGCCCCTTCGAAGAGACACAACTCTCTTATTGACTCTCATCCTCATTGA
Protein Sequence
- >BnaC06g29530D
MAPCRTMVLLCLVLFLAASSSSYVAAARIGATVEMKNRKSLGFKDSLISGYLPKGVPIPPSAPSKRHNSLIDSHPH - >BnaC06g29530D
MAPCRTMVLLCLVLFLAASSSSYVAAARIGATVEMKNRKSLGFKDSLISGYLPKGVPIPPSAPSKRHNSLIDSHPH