Gene Details:

  • Gene ID: BnaC06g29530D
  • Gene Symbol: BnC06.IDA|BnaIDA-C06
  • Gene Name: Inflorescence Deficient in Abscission6
  • Genome:
  • Species: Brassica napus

Functional Descriptions:

  • BnC06.IDA|BnaIDA-C06 and BnA07.IDA share a highly conserved amino-acid sequence and exhibit 76.9% sequence similarity to AtIDA.
  • Transcriptomic analysis revealed that BnC06.IDA|BnaIDA-C06 and BnA07.IDA were preferentially expressed in the floral abscission zone (AZ), and in other floral organs, including petals, sepals, and filaments.
  • Our results suggest a role for BnC06.IDA|BnaIDA-C06 and BnA07.IDA in determining the fate of floral organ abscission.
  • In summary, our results demonstrate that BnA07.IDA and BnC06.IDA|BnaIDA-C06 are functionally redundant and are involved in the regulation of floral abscission in OSR.
  • This suggests that BnaIDA-A07 and BnC06.IDA|BnaIDA-C06 may be involved in floral organ abscission in B. napus.
  • This result suggests that BnaIDA-A07 and BnC06.IDA|BnaIDA-C06 play a crucial role in silique dehiscence.
  • Therefore, important agronomic traits were unaffected by the simultaneous knock out of BnaIDA-A07 and BnC06.IDA|BnaIDA-C06 genes in B. napus.

Literature:

Gene Resources:

Orthologs:

Sequences:

cDNA Sequence
  • >BnaC06g29530D
    ATGGCTCCGTGTCGTACGATGGTTCTGCTCTGTCTGGTTCTGTTTCTGGCGGCGAGTAGCTCTTCTTATGTGGCCGCTGCAAGAATTGGAGCCACCGTGGAGATGAAGAATAGGAAGAGCTTAGGGTTTAAAGACAGCCTTATTTCTGGTTACTTGCCCAAAGGTGTTCCCATTCCTCCTTCTGCCCCTTCGAAGAGACACAACTCTCTTATTGACTCTCATCCTCATTGA
  • >BnaC06g29530D
    ATGGCTCCGTGTCGTACGATGGTTCTGCTCTGTCTGGTTCTGTTTCTGGCGGCGAGTAGCTCTTCTTATGTGGCCGCTGCAAGAATTGGAGCCACCGTGGAGATGAAGAATAGGAAGAGCTTAGGGTTTAAAGACAGCCTTATTTCTGGTTACTTGCCCAAAGGTGTTCCCATTCCTCCTTCTGCCCCTTCGAAGAGACACAACTCTCTTATTGACTCTCATCCTCATTGA
CDS Sequence
  • >BnaC06g29530D
    ATGGCTCCGTGTCGTACGATGGTTCTGCTCTGTCTGGTTCTGTTTCTGGCGGCGAGTAGCTCTTCTTATGTGGCCGCTGCAAGAATTGGAGCCACCGTGGAGATGAAGAATAGGAAGAGCTTAGGGTTTAAAGACAGCCTTATTTCTGGTTACTTGCCCAAAGGTGTTCCCATTCCTCCTTCTGCCCCTTCGAAGAGACACAACTCTCTTATTGACTCTCATCCTCATTGA
  • >BnaC06g29530D
    ATGGCTCCGTGTCGTACGATGGTTCTGCTCTGTCTGGTTCTGTTTCTGGCGGCGAGTAGCTCTTCTTATGTGGCCGCTGCAAGAATTGGAGCCACCGTGGAGATGAAGAATAGGAAGAGCTTAGGGTTTAAAGACAGCCTTATTTCTGGTTACTTGCCCAAAGGTGTTCCCATTCCTCCTTCTGCCCCTTCGAAGAGACACAACTCTCTTATTGACTCTCATCCTCATTGA
Protein Sequence
  • >BnaC06g29530D
    MAPCRTMVLLCLVLFLAASSSSYVAAARIGATVEMKNRKSLGFKDSLISGYLPKGVPIPPSAPSKRHNSLIDSHPH
  • >BnaC06g29530D
    MAPCRTMVLLCLVLFLAASSSSYVAAARIGATVEMKNRKSLGFKDSLISGYLPKGVPIPPSAPSKRHNSLIDSHPH