Gene Details:
- Gene ID: BnaC02g05070D
- Gene Symbol: BnaC02.TT4
- Gene Name:
- Genome: B. napus genome v4.1
- Species: Brassica napus
Functional Descriptions:
- Our multi-omics analysis suggests that BnaC05.UK plays important functions in affecting the level of many metabolites and may affect SOC in B. napus.
- BnaC05.UK is a novel gene negatively impacting SOC in B. napus.
- Three candidate genes (BnaA03.TT4, BnaC02.TT4, and BnaC05.UK), which impact SOC through the regulation of metabolome in the seeds.
- We validate the function of BnaA03.TT4, BnaC02.TT4, and BnaC05.UK, three candidate genes predicted by multi-omics analysis, which show significant impacts on seed oil content through regulating flavonoid metabolism in B. napus.
Function-related keywords:
Literature:
- Characterization of novel loci controlling seed oil content in Brassica napus by marker metabolite-based multi-omics analysis. DOI: 10.1186/s13059-023-02984-z ; PMID: 37337206
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >BnaC02g05070D
ATGGTGATGGTGGGTACAACCTCTTCGTTGGATGAGATCAGAAAGGCACAGAGAGCAGACGGCCCTGCAGGCATCTTGGCGATAGGTACGGCCAACCCTGCGAACCATGTGCTCCAAGCGGAGTATCCAGACTACTACTTCCGCATCACCAACAGTGAACACATGACCGACCTTAAGGAGAAGTTCAAGCGCATGTGCGATAAGTCGACCATAAGGAAACGCCACATGCACTTGACCGAGGAGTTCTTGAAAGAGAACCCTAATATGTGTGCCTACATGGCTCCTTCGCTCGATGCTAGACAAGACCTCGTGGTGGTTGAAGTCCCTAAGCTAGGCAAAGATGCAGCAGTGAAGGCCATCAAGGAGTGGGGTCAGCCTAAGTCCAAGATCACACACGTTGTCTTCTGCACCACCTCAGGAGTTGACATGCCTGGTGCTGACTACCAGCTCACCAAGCTCCTTGGCCTTCGTCCTTCCGTCAAGCGTCTCATGATGTACCAACAAGGTTGCTTCGCCGGCGGCACTGTCCTCCGTCTCGCCAAGGACCTCGCTGAGAACAACCGTGGCGCACGTGTCCTCGTGGTCTGCTCCGAGATCACAGCCGTCACCTTCCGTGGCCCCTCTGACACTCACCTTGACTCACTCGTGGGACAAGCTCTCTTCAGTGACGGTGCAGCCGCACTCATTGTCGGTTCAGACCCTGATGTTTCTGCTGGAGAGAAGCCCATCTTCGAGATGGTGTCTGCCGCGCAGACCATCCTCCCAGACTCGGACGGTGCCATCGATGGACACTTGAGGGAAGTTGGACTCACCTTCCATCTCCTCAAGGACGTCCCTGGACTCATCTCCAAGAACATTGAAAAGAGCCTAGACGAAGCGTTTAAACCGTTGGGGATAAGTGATTGGAACTCCCTCTTCTGGATAGCTCACCCTGGTGGTCCAGCGATCCTTGACGACGTTGAGAAGAAGCTAGGACTCAAGGCAGAGAAGATGAGAGCCACGCGTCACGTGTTGAGCGAGTATGGTAACATGTCTAGCGCCTGCGTCCTCTTTATATTGGATGAGATGAGGAGGAAGTCTGTGGAAGATGGCGTAGCCACGACAGGTGAAGGGTTGGAGTGGGGTGTCCTGTTTGGGTTCGGACCAGGTCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAATTAAACAGAAAGCTCTCTTCCTATAAATGCTTACCTACCTTCTTCACATACTTACCATCATATCATGTCTTTATGTTTTTTTTTTTTCAATGTAAGAAAATATTTGTAATGCAATAATTAAAAAAAAAA
CDS Sequence
- >BnaC02g05070D
ATGGTGATGGTGGGTACAACCTCTTCGTTGGATGAGATCAGAAAGGCACAGAGAGCAGACGGCCCTGCAGGCATCTTGGCGATAGGTACGGCCAACCCTGCGAACCATGTGCTCCAAGCGGAGTATCCAGACTACTACTTCCGCATCACCAACAGTGAACACATGACCGACCTTAAGGAGAAGTTCAAGCGCATGTGCGATAAGTCGACCATAAGGAAACGCCACATGCACTTGACCGAGGAGTTCTTGAAAGAGAACCCTAATATGTGTGCCTACATGGCTCCTTCGCTCGATGCTAGACAAGACCTCGTGGTGGTTGAAGTCCCTAAGCTAGGCAAAGATGCAGCAGTGAAGGCCATCAAGGAGTGGGGTCAGCCTAAGTCCAAGATCACACACGTTGTCTTCTGCACCACCTCAGGAGTTGACATGCCTGGTGCTGACTACCAGCTCACCAAGCTCCTTGGCCTTCGTCCTTCCGTCAAGCGTCTCATGATGTACCAACAAGGTTGCTTCGCCGGCGGCACTGTCCTCCGTCTCGCCAAGGACCTCGCTGAGAACAACCGTGGCGCACGTGTCCTCGTGGTCTGCTCCGAGATCACAGCCGTCACCTTCCGTGGCCCCTCTGACACTCACCTTGACTCACTCGTGGGACAAGCTCTCTTCAGTGACGGTGCAGCCGCACTCATTGTCGGTTCAGACCCTGATGTTTCTGCTGGAGAGAAGCCCATCTTCGAGATGGTGTCTGCCGCGCAGACCATCCTCCCAGACTCGGACGGTGCCATCGATGGACACTTGAGGGAAGTTGGACTCACCTTCCATCTCCTCAAGGACGTCCCTGGACTCATCTCCAAGAACATTGAAAAGAGCCTAGACGAAGCGTTTAAACCGTTGGGGATAAGTGATTGGAACTCCCTCTTCTGGATAGCTCACCCTGGTGGTCCAGCGATCCTTGACGACGTTGAGAAGAAGCTAGGACTCAAGGCAGAGAAGATGAGAGCCACGCGTCACGTGTTGAGCGAGTATGGTAACATGTCTAGCGCCTGCGTCCTCTTTATATTGGATGAGATGAGGAGGAAGTCTGTGGAAGATGGCGTAGCCACGACAGGTGAAGGGTTGGAGTGGGGTGTCCTGTTTGGGTTCGGACCAGGTCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAA
Protein Sequence
- >BnaC02g05070D
MVMVGTTSSLDEIRKAQRADGPAGILAIGTANPANHVLQAEYPDYYFRITNSEHMTDLKEKFKRMCDKSTIRKRHMHLTEEFLKENPNMCAYMAPSLDARQDLVVVEVPKLGKDAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDPDVSAGEKPIFEMVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGGPAILDDVEKKLGLKAEKMRATRHVLSEYGNMSSACVLFILDEMRRKSVEDGVATTGEGLEWGVLFGFGPGLTVETVVLHSVPV