Information report for BnaA9.CYP78A9
Gene Details
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Functional Descriptions
- BnaA9.CYP78A9 and BnaA9.ARF18 are involved in respectively the synthesis and signal transduction of AUX, while BnaA9.BRH1 is involved in the signal transduction of BR.
- Association of BnaA9.ARF18 and BnaA9.CYP78A9 expression level with silique length.
- Sequence variation in the coding region of BnaA9.ARF18 and expression of BnaA9.CYP78A9 in silique walls were strongly associated with silique length.
- A CACTA-like transposable element in the upstream region of BnaA9.CYP78A9 acts as an enhancer to increase silique length and seed weight in rapeseed.
- The expression level of BnaA9.CYP78A9 in silique valves of the long-silique variety is much higher than that in the regular-silique variety, which results in elongated cells and a prolonged phase of silique elongation.
Functional Keywords
Literature and News
- Key genes and mechanisms underlying natural variation of silique length in oilseed rape (Brassica napus L.) germplasm. DOI: 10.1016/j.cj.2021.08.010
- A CACTA-like transposable element in the upstream region of BnaA9.CYP78A9 acts as an enhancer to increase silique length and seed weight in rapeseed. DOI: 10.1111/tpj.14236 ; PMID: 30664290
Sequences
cDNA Sequence
- >BnaA09g55530D
ATGGCGACCAAGCTCGACACAAGCAGCTTACTCTTCGCTCTCTTGTCCAAATGTAGCCTCCTTACTCAAACCCATCTCGCTCTCTCTCTTCTCGTAGCCTCCATGGCTTGCCTCGCTGTCTCTCTCTTCTACTGGTCTCATCCCGGAGGACCCGCATGGGGAAAATACTTCCTCCATCGCCGTCACCAAACCGCCGTGATTCCCGGACCAAGAGGCTTACCTTTTGTCGGAAGCATGTCTCTCATGTCCAACGCTTTAGCTCACCGCTGCATAGCCGCAGCCGCGGAGAAATTCGGAGCCAAACGTTTAATGGCGTTTAGCTTGGGAGATACTCGCGTGATCGTCACGTGCAACCCTGATGTAGCTAAAGAGATTCTAAACAGTCCGGTTTTCGCTGACCGTCCGGTTAAGGAATCAGCGTATTCCCTTATGTTTAACCGGGCTATCGGTTTCGCTCCTTACGGCGTTTACTGGCGAACGTTGAGGAAAATCGCGTCTAATCATCTTTTCAGCCCGAAACAGATCAAACGCTCTGAAACGCAGAGACGTGTGATCGCGAATCAGATCGTGAAATGTCTCGAGAAACAGAGCAGCGGCAACGAAGGACTCTGTTTTGCTCGTGACTTGATCAAAACGGCATCGCTTAATAGCATGATGTGCTCTGTTTTCGGGAAAGAGTACGAGCTTGAGCATGAACACGATGAAGTTAATGAGCTTCGTGGTTTGGTCGAAGAAGGTTATGATTTACTCGGAACACTTAACTGGACCGATCATCTCCCGTGGCTGTCGGAATTTGATCCTCAGAGAATCCGGTCTAGATGTTCTAATCTTGTACCTAAAGTAAACCGGTTCGTGAACCGGATTATCTCTGACCACCGTGATCAAACTCGTGACTCGCCTAGCGACTTCGTTGACGTATTGCTCTCTCTCGATGGTCAGGATAAGTTATCTGACCCGGATATGGTCGCCGTTCTCTGGGAAATGATATTCAGAGGAACTGACACGGTGGCTGTCTTGATCGAGTGGGTTCTTGCTAGGATGGTCCTTCATCCAGATATTCAGTCAATGGTTCACAACGAGCTTGATCAGAACAACGTGGGAAGATCAAGAACCGTGGAAGAATCTGACGTGGCGTCTCTTACATATCTGACTGCTGTTGTGAAAGAAGTCTTGAGGCTTCACCCGCCAGGCCCACTTCTGTCGTGGGCCCGCTTAGCAATCACAGACACAATCATTGACGGCCGTCGTGTACCGGCAGGGACCACCGCAATGGTGAACATGTGGGCTATAGCACATGACCCACAAGTGTGGGAAAATCCTTTGGAGTTTAAACCTGAACGGTTTGTAGCAAAGGAAGGTGAGGTCGAGTTCTCGGTTCTTGGTTCGGATCTGAGGCTAGCACCGTTCGGGTCGGGCCGTCGGGTCTGCCCTGGAAAGAATCTTGGTTTGTCCACCGTGATGTATTGGATCGCTACTCTTATGCACGAGTTTGAGTGGTTTGCACCTACAGGTGAAAAGACTGTTGACTTGTCCGAGAAACTGAGGCTCTCGTGTGAGATGGCTAATCCTCTTGCTGTTAAACTGAGCGGCAGGCGCGGTTAA
CDS Sequence
- >BnaA09g55530D
ATGGCGACCAAGCTCGACACAAGCAGCTTACTCTTCGCTCTCTTGTCCAAATGTAGCCTCCTTACTCAAACCCATCTCGCTCTCTCTCTTCTCGTAGCCTCCATGGCTTGCCTCGCTGTCTCTCTCTTCTACTGGTCTCATCCCGGAGGACCCGCATGGGGAAAATACTTCCTCCATCGCCGTCACCAAACCGCCGTGATTCCCGGACCAAGAGGCTTACCTTTTGTCGGAAGCATGTCTCTCATGTCCAACGCTTTAGCTCACCGCTGCATAGCCGCAGCCGCGGAGAAATTCGGAGCCAAACGTTTAATGGCGTTTAGCTTGGGAGATACTCGCGTGATCGTCACGTGCAACCCTGATGTAGCTAAAGAGATTCTAAACAGTCCGGTTTTCGCTGACCGTCCGGTTAAGGAATCAGCGTATTCCCTTATGTTTAACCGGGCTATCGGTTTCGCTCCTTACGGCGTTTACTGGCGAACGTTGAGGAAAATCGCGTCTAATCATCTTTTCAGCCCGAAACAGATCAAACGCTCTGAAACGCAGAGACGTGTGATCGCGAATCAGATCGTGAAATGTCTCGAGAAACAGAGCAGCGGCAACGAAGGACTCTGTTTTGCTCGTGACTTGATCAAAACGGCATCGCTTAATAGCATGATGTGCTCTGTTTTCGGGAAAGAGTACGAGCTTGAGCATGAACACGATGAAGTTAATGAGCTTCGTGGTTTGGTCGAAGAAGGTTATGATTTACTCGGAACACTTAACTGGACCGATCATCTCCCGTGGCTGTCGGAATTTGATCCTCAGAGAATCCGGTCTAGATGTTCTAATCTTGTACCTAAAGTAAACCGGTTCGTGAACCGGATTATCTCTGACCACCGTGATCAAACTCGTGACTCGCCTAGCGACTTCGTTGACGTATTGCTCTCTCTCGATGGTCAGGATAAGTTATCTGACCCGGATATGGTCGCCGTTCTCTGGGAAATGATATTCAGAGGAACTGACACGGTGGCTGTCTTGATCGAGTGGGTTCTTGCTAGGATGGTCCTTCATCCAGATATTCAGTCAATGGTTCACAACGAGCTTGATCAGAACAACGTGGGAAGATCAAGAACCGTGGAAGAATCTGACGTGGCGTCTCTTACATATCTGACTGCTGTTGTGAAAGAAGTCTTGAGGCTTCACCCGCCAGGCCCACTTCTGTCGTGGGCCCGCTTAGCAATCACAGACACAATCATTGACGGCCGTCGTGTACCGGCAGGGACCACCGCAATGGTGAACATGTGGGCTATAGCACATGACCCACAAGTGTGGGAAAATCCTTTGGAGTTTAAACCTGAACGGTTTGTAGCAAAGGAAGGTGAGGTCGAGTTCTCGGTTCTTGGTTCGGATCTGAGGCTAGCACCGTTCGGGTCGGGCCGTCGGGTCTGCCCTGGAAAGAATCTTGGTTTGTCCACCGTGATGTATTGGATCGCTACTCTTATGCACGAGTTTGAGTGGTTTGCACCTACAGGTGAAAAGACTGTTGACTTGTCCGAGAAACTGAGGCTCTCGTGTGAGATGGCTAATCCTCTTGCTGTTAAACTGAGCGGCAGGCGCGGTTAA
Protein Sequence
- >BnaA09g55530D
MATKLDTSSLLFALLSKCSLLTQTHLALSLLVASMACLAVSLFYWSHPGGPAWGKYFLHRRHQTAVIPGPRGLPFVGSMSLMSNALAHRCIAAAAEKFGAKRLMAFSLGDTRVIVTCNPDVAKEILNSPVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRKIASNHLFSPKQIKRSETQRRVIANQIVKCLEKQSSGNEGLCFARDLIKTASLNSMMCSVFGKEYELEHEHDEVNELRGLVEEGYDLLGTLNWTDHLPWLSEFDPQRIRSRCSNLVPKVNRFVNRIISDHRDQTRDSPSDFVDVLLSLDGQDKLSDPDMVAVLWEMIFRGTDTVAVLIEWVLARMVLHPDIQSMVHNELDQNNVGRSRTVEESDVASLTYLTAVVKEVLRLHPPGPLLSWARLAITDTIIDGRRVPAGTTAMVNMWAIAHDPQVWENPLEFKPERFVAKEGEVEFSVLGSDLRLAPFGSGRRVCPGKNLGLSTVMYWIATLMHEFEWFAPTGEKTVDLSEKLRLSCEMANPLAVKLSGRRG