Information report for BnaA09g48250D
Gene Details
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Functional Descriptions
- Collectively, these results confirmed that the candidate gene BnaA09g48250D in the cqOC-A9-9-2 interval, which shows structural variation between N53-2 and Ken-C8, is involved in SOC regulation.
- Overexpression and knockout of BnaA09g48250D led to significant increases and decreases in SOC, respectively, in the transgenic lines.
- The candidate gene BnaA09g48250D, which showed structural variation in a QTL/AGR on chrA09, was identified by fine-mapping of a KN double-haploid population derived from hybridization of N53-2 and Ken-C8. Overexpression and knockout of BnaA09g48250D led to significant increases and decreases in SOC, respectively, in the transgenic lines.
Literature and News
Sequences
cDNA Sequence
- >BnaA09g48250D
ATGGTGAGTCTATTTTCGTCAAGGAAGAGATCGAGGAAAGAAAGAAAGAACCCTTATTCAGATCTCGGACTCGAAAAGTTCTCTGCACTTCTATCCGAGCTAGACGAGAAGAGACAAAGCATTTACGCAACGAGGGTCGACTCAGATGGGCCGCCACTTGTTCGGTTTGTGTTCAAAAGCTCGGGAGAGTGCGTCCCTATCATGATCAAGACAAAGAAGGTAACCAAGAAGAAGGATTCTCAATATGATTTAAAGGTCAAGATCGAAACAAAAGTGGAAGAGGAAAATGAAACAAAGAAAACAGAGTTGGTAACAGAGCAGAAACAGAGCTGCGTATTGAATGAGAATCTGAAGAAGATTTCAAGACCGAAGCATTTTTTACCCGTGACAACAATCTTGGTTCTAATCTTCTTCGTGTTCTTTGGACGAACAGTATCGATCATGTGCACTTGTATCGTTTGGTACTTGGTTCCATTGATCAAGGAACATTGCAGAAGGAGAGGATCATCACAACATGAGACCGAAAAGAAAAACAAAAAGAAGTTTCCGCATCTGGCTGCTCCTGATTCTGCTTCCTCTGTAAACCAGGATCTGCGTGCAATGGACGCCTCAATGATTACTAATCCCAAATCCATTGTCTCCCTTCCCTCTTTGTTCATGGGGAGGTCGGGAGGTAGTATTAGAAGTTCCCAATGTAATGTCACTATGGGACAAACGGTTAGCTTCCCGAGGCAAAAGACTCTGACTTTAAAAGTTAGCCGGAACGTGAAGAGAAAAAGTGGTGGTGGTGCGTTTGCTGCTACTTGTAGCAGTGGGGATAAGATTCTTGTGGCTAACAGAGGTGAAATCGCTGTCCGTGTTATCCGAACAGCTCACGAAATGGGGATCCCTTGTGTTGCTGTTTACTCAACTATAGACAAGGATGCACTTCATGTGAAGTTGGCTGATGAAGCTGTTTGTATTGGTGAAGCTCCTAGCAACCAGTCGTATTTGTTGATACCGAATGTTCTGTCAGCTGCGATTAGCAGAGGATGTACAATGCTCCATCCTGGATATGGATTCCTTGCGGAGAACGCTCTTTTTGTAGAGATGTGTAGAGAACACAGGATCAATTTCATTGGACCAAATCCTGATAGCATCCGTGTCATGGGTGACAAATCAACTGCTAGGGAGACAATGAAAAATGCTGGTGTCCCTACTGTACCAGGGAGTGATGGATTATTGCAGAGCACAGAGGAAGGAGTCAGGCTCGCCAATGAGATTGGGTACCCTGTAATGATCAAGGCAACAGCAGGTGGTGGTGGACGTGGAATGCGTCTTGCCAATGAACCGTCAGAGTTTGTGAAACTGTTGCAGCAAGCAAAGAGTGAGGCCGCTGCTGCTTTTGGAAATGATGGAGTTTATCTGGAGAAGTACGTGCAAAATCCCCGTCATATTGAGTTCCAGATTCTTGCCGATAAATTTGGTAACGTTGTTCACTTTGGCGAGCGTGACTGCAGCATCCAGAGGCGTAACCAAAAGTTGCTGGAAGAAGCACCTTCTCCTGCACTGACCCCTGAGCTGCGAAAAGCCATGGGTGATGCAGCAGTGGCAGCAGCAGCGTCCATTGGTTACATTGGTGTTGGTACAGTGGAGTTTCTTCTGGATGAGAGAGGTTCCTTCTATTTCATGGAAATGAACACTAGAATCCAGGTGGAGCACCCTGTGACGGAGATGATTTACTCAGTTGATTTGATTGAAGAACAGATCCGTGTTGCAATGGGAGAGAAACTGCGTTATACACAGGATGAGATTGTGCTTAGAGGACATTCGATTGAGTGTCGTATCAATGCAGAAGACCCATTTAAAGGATTCAGACCTGGACCTGGAAGAATAACATCGTATCTGCCATCTGGAGGTCCTTTTGTTAGGATGGATAGCCATGTGTATCCGGACTATGTTGTTCCTCCAAGCTATGATTCTCTTCTTGGAAAGCTTATTGTATGGGCTCCAACGAGGGAAAGGGCGATCGAGCGGATGAAGCGTGCACTCAATGACACTATTATTACAGGGGTTCCCACCACCATTGAGTACCACAAGCTTATCCTTGAAGTTGAGGATTTCAAAAACGGAAAAGTTGATACAGCTTTCATCCCCAAGCATGAAGAGGAATTAGCAGAGCCTGATGAAATTGTCCCAGTGAAAGATTTGACAAATGTAGCTGCTTAGAATCCATCAGCTCTTACATGAAGCAGTGATATTTGGAACAACAGGGGATTCAGTTATGCCAATATGTCCGCAAAGTTTTCTTACCTGATTCTGGTGTCTTCGCCTTTTGTGATGTTATGCAATAGCAACTTCACACATGGTTTCGAAAATAGTTGTGTTTTTTTTTTCCGGTTGAGTTTATGGTATTTACAGTACTTCATTTCAGACCTGAGACCATTTTTAAGTATTTCTTGACTGCAATAGTTGAGTTTATTTATGTTATTAGCAAGTCCGAACTTTAAATCATTTATAAACACAATGTCCTTGTGGTGTTATGCAAGACAGAGTCATCTTGTAAGTTT
CDS Sequence
- >BnaA09g48250D
ATGGTGAGTCTATTTTCGTCAAGGAAGAGATCGAGGAAAGAAAGAAAGAACCCTTATTCAGATCTCGGACTCGAAAAGTTCTCTGCACTTCTATCCGAGCTAGACGAGAAGAGACAAAGCATTTACGCAACGAGGGTCGACTCAGATGGGCCGCCACTTGTTCGGTTTGTGTTCAAAAGCTCGGGAGAGTGCGTCCCTATCATGATCAAGACAAAGAAGGTAACCAAGAAGAAGGATTCTCAATATGATTTAAAGGTCAAGATCGAAACAAAAGTGGAAGAGGAAAATGAAACAAAGAAAACAGAGTTGGTAACAGAGCAGAAACAGAGCTGCGTATTGAATGAGAATCTGAAGAAGATTTCAAGACCGAAGCATTTTTTACCCGTGACAACAATCTTGGTTCTAATCTTCTTCGTGTTCTTTGGACGAACAGTATCGATCATGTGCACTTGTATCGTTTGGTACTTGGTTCCATTGATCAAGGAACATTGCAGAAGGAGAGGATCATCACAACATGAGACCGAAAAGAAAAACAAAAAGAAGTTTCCGCATCTGGCTGCTCCTGATTCTGCTTCCTCTGTAAACCAGGATCTGCGTGCAATGGACGCCTCAATGATTACTAATCCCAAATCCATTGTCTCCCTTCCCTCTTTGTTCATGGGGAGGTCGGGAGGTAGTATTAGAAGTTCCCAATGTAATGTCACTATGGGACAAACGGTTAGCTTCCCGAGGCAAAAGACTCTGACTTTAAAAGTTAGCCGGAACGTGAAGAGAAAAAGTGGTGGTGGTGCGTTTGCTGCTACTTGTAGCAGTGGGGATAAGATTCTTGTGGCTAACAGAGGTGAAATCGCTGTCCGTGTTATCCGAACAGCTCACGAAATGGGGATCCCTTGTGTTGCTGTTTACTCAACTATAGACAAGGATGCACTTCATGTGAAGTTGGCTGATGAAGCTGTTTGTATTGGTGAAGCTCCTAGCAACCAGTCGTATTTGTTGATACCGAATGTTCTGTCAGCTGCGATTAGCAGAGGATGTACAATGCTCCATCCTGGATATGGATTCCTTGCGGAGAACGCTCTTTTTGTAGAGATGTGTAGAGAACACAGGATCAATTTCATTGGACCAAATCCTGATAGCATCCGTGTCATGGGTGACAAATCAACTGCTAGGGAGACAATGAAAAATGCTGGTGTCCCTACTGTACCAGGGAGTGATGGATTATTGCAGAGCACAGAGGAAGGAGTCAGGCTCGCCAATGAGATTGGGTACCCTGTAATGATCAAGGCAACAGCAGGTGGTGGTGGACGTGGAATGCGTCTTGCCAATGAACCGTCAGAGTTTGTGAAACTGTTGCAGCAAGCAAAGAGTGAGGCCGCTGCTGCTTTTGGAAATGATGGAGTTTATCTGGAGAAGTACGTGCAAAATCCCCGTCATATTGAGTTCCAGATTCTTGCCGATAAATTTGGTAACGTTGTTCACTTTGGCGAGCGTGACTGCAGCATCCAGAGGCGTAACCAAAAGTTGCTGGAAGAAGCACCTTCTCCTGCACTGACCCCTGAGCTGCGAAAAGCCATGGGTGATGCAGCAGTGGCAGCAGCAGCGTCCATTGGTTACATTGGTGTTGGTACAGTGGAGTTTCTTCTGGATGAGAGAGGTTCCTTCTATTTCATGGAAATGAACACTAGAATCCAGGTGGAGCACCCTGTGACGGAGATGATTTACTCAGTTGATTTGATTGAAGAACAGATCCGTGTTGCAATGGGAGAGAAACTGCGTTATACACAGGATGAGATTGTGCTTAGAGGACATTCGATTGAGTGTCGTATCAATGCAGAAGACCCATTTAAAGGATTCAGACCTGGACCTGGAAGAATAACATCGTATCTGCCATCTGGAGGTCCTTTTGTTAGGATGGATAGCCATGTGTATCCGGACTATGTTGTTCCTCCAAGCTATGATTCTCTTCTTGGAAAGCTTATTGTATGGGCTCCAACGAGGGAAAGGGCGATCGAGCGGATGAAGCGTGCACTCAATGACACTATTATTACAGGGGTTCCCACCACCATTGAGTACCACAAGCTTATCCTTGAAGTTGAGGATTTCAAAAACGGAAAAGTTGATACAGCTTTCATCCCCAAGCATGAAGAGGAATTAGCAGAGCCTGATGAAATTGTCCCAGTGAAAGATTTGACAAATGTAGCTGCTTAG
Protein Sequence
- >BnaA09g48250D
MVSLFSSRKRSRKERKNPYSDLGLEKFSALLSELDEKRQSIYATRVDSDGPPLVRFVFKSSGECVPIMIKTKKVTKKKDSQYDLKVKIETKVEEENETKKTELVTEQKQSCVLNENLKKISRPKHFLPVTTILVLIFFVFFGRTVSIMCTCIVWYLVPLIKEHCRRRGSSQHETEKKNKKKFPHLAAPDSASSVNQDLRAMDASMITNPKSIVSLPSLFMGRSGGSIRSSQCNVTMGQTVSFPRQKTLTLKVSRNVKRKSGGGAFAATCSSGDKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADEAVCIGEAPSNQSYLLIPNVLSAAISRGCTMLHPGYGFLAENALFVEMCREHRINFIGPNPDSIRVMGDKSTARETMKNAGVPTVPGSDGLLQSTEEGVRLANEIGYPVMIKATAGGGGRGMRLANEPSEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQILADKFGNVVHFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMIYSVDLIEEQIRVAMGEKLRYTQDEIVLRGHSIECRINAEDPFKGFRPGPGRITSYLPSGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTRERAIERMKRALNDTIITGVPTTIEYHKLILEVEDFKNGKVDTAFIPKHEEELAEPDEIVPVKDLTNVAA