Gene Details:
- Gene ID: Bna.C03g09040D
- Gene Symbol: Bna.C03ERF AP2-3
- Gene Name:
- Genome: B. napus reference genome v3.0
- Species: Brassica napus
Functional Descriptions:
- WGCNA analysis identified the MEyellow module, which has the highest correlation with DZ formation and is significantly related to DZ formation genes. The two TFs Bna.A05ABI5 and Bna.C03ERF/AP2-3 were selected as hub genes in this network.
- The upregulation of Bna.C03ERF/AP2-3 is possibly involved in the transcription of downstream SHP1/2 and LEA proteins to trigger the shattering mechanism.
- Two hub genes Bna.A05ABI5 and Bna.C03ERF/AP2-3 were selected from the MEyellow module, which possibly regulate the PS through senescence-related mechanisms. Further investigation found that senescence-associated transcription factor Bna.A05ABI5 upregulated the expression of SAG2 and ERF/AP2 to control the shattering process.
Function-related keywords:
Literature:
- Comparative transcriptome and co-expression network analysis revealed the genes associated with senescence and polygalacturonase activity involved in pod shattering of rapeseed. DOI: 10.1186/s13068-023-02275-6 ; PMID: 36750865
Related News:
Gene Resources:
Sequences:
cDNA Sequence
CDS Sequence
Protein Sequence