Gene Details:
- Gene ID: AT5G67570
- Gene Symbol: DG1, EMB1408, EMB246, TSL1
- Gene Name: DELAYED GREENING 1, embryo defective 1408, EMBRYO DEFECTIVE 246, thermo sensitive leaf color 1
- Description: Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)
- TAIR Accession: locus:2158601
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Gene Ontology:
- GO:0009793 — acts upstream of or within — embryo development ending in seed dormancy
- GO:0005515 — enables — protein binding
- GO:0009507 — is active in — chloroplast
- GO:0042793 — involved in — plastid transcription
- GO:0009658 — involved in — chloroplast organization
Germplasm Phenotype:
- CS24334 — embryo defective; developmental arrest of mutant embryos occurs at transition stage.
- CS3034 — developmental arrest of mutant embryos occurs at transition, globular, heart stage; white seeds and embryos; 23.9% mutant.
- dg1 — Homozygous plants have siliques segregating ca. 40% embryo lethal with embryos arresting at a variety of stages.
Function-related keywords:
Literature:
- An embryo-defective mutant of arabidopsis disrupted in the final step of biotin synthesis. DOI: 10.1104/pp.116.3.935 ; PMID: 9501126
- Identification of genes required for embryo development in Arabidopsis. DOI: 10.1104/pp.104.045179 ; PMID: 15266054
- The pentratricopeptide repeat protein DELAYED GREENING1 is involved in the regulation of early chloroplast development and chloroplast gene expression in Arabidopsis. DOI: 10.1104/pp.108.116194 ; PMID: 18400937
- Integrating the genetic and physical maps of Arabidopsis thaliana: identification of mapped alleles of cloned essential (EMB) genes. DOI: 10.1371/journal.pone.0007386 ; PMID: 19812694
- Interaction of the pentatricopeptide-repeat protein DELAYED GREENING 1 with sigma factor SIG6 in the regulation of chloroplast gene expression in Arabidopsis cotyledons. DOI: 10.1111/j.1365-313X.2010.04304.x ; PMID: 20626654
- Identification of nuclear genes encoding chloroplast-localized proteins required for embryo development in Arabidopsis. DOI: 10.1104/pp.110.168120 ; PMID: 21139083
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- Mutation of DELAYED GREENING1 impairs chloroplast RNA editing at elevated ambient temperature in Arabidopsis. DOI: 10.1016/j.jgg.2020.03.005 ; PMID: 32505546
Sequences:
cDNA Sequence
- >AT5G67570.1
TCTTCGCAACAATGGATGCTTCGGTGGTGAGATTTTCCCAATCGCCGGCAAGAGTGCCACCGGAATTTGAACCAGATATGGAGAAGATTAAACGGAGGCTGCTCAAGTACGGTGTTGATCCAACCCCCAAAATCCTGAACAATCTCCGAAAGAAAGAAATTCAAAAACACAACCGTAGAACCAAGCGCGAAACCGAGTCCGAGGCGGAGGTGTATACGGAGGCGCAGAAACAATCAATGGAGGAAGAAGCTCGTTTTCAAACCCTTAGACGGGAATACAAGCAATTCACGAGGTCAATTTCTGGAAAAAGGGGCGGCGATGTTGGTTTGATGGTTGGGAATCCATGGGAAGGAATCGAGAGAGTGAAGCTGAAGGAGCTCGTTAGTGGCGTTCGGAGAGAAGAGGTTAGTGCTGGTGAATTGAAGAAAGAGAATCTAAAAGAGTTGAAGAAGATACTTGAGAAGGATCTTCGTTGGGTTCTAGACGACGACGTTGATGTGGAAGAATTTGATTTGGACAAAGAATTTGATCCTGCGAAACGGTGGCGTAACGAAGGAGAAGCAGTCAGAGTTCTCGTTGACAGATTGAGTGGTAGAGAAATCAATGAGAAGCATTGGAAGTTTGTGAGAATGATGAATCAATCAGGGCTTCAGTTCACTGAAGATCAGATGCTTAAGATCGTTGATCGATTGGGACGTAAACAGAGCTGGAAACAAGCTTCAGCTGTTGTTCATTGGGTGTATTCTGATAAAAAGCGTAAACATCTTAGGAGCAGATTTGTTTACACCAAGCTTTTGTCCGTTCTTGGGTTTGCGAGGAGGCCACAGGAAGCTCTTCAGATATTCAATCAGATGCTTGGTGATCGCCAGTTATATCCTGATATGGCGGCGTACCACTGTATTGCTGTAACACTTGGGCAAGCGGGTTTATTGAAGGAGTTGCTTAAAGTAATCGAGCGTATGAGGCAGAAACCGACTAAACTAACTAAGAATTTGCGGCAAAAGAACTGGGATCCTGTGCTTGAACCTGACTTGGTTGTATACAACGCTATTCTTAACGCTTGTGTTCCAACACTCCAATGGAAGGCTGTTTCATGGGTATTTGTAGAGTTAAGAAAAAATGGTTTGAGGCCTAATGGAGCTACATATGGGCTTGCGATGGAGGTTATGCTGGAGTCAGGGAAGTTTGATCGTGTTCACGATTTTTTTAGGAAGATGAAAAGCAGTGGCGAAGCTCCAAAAGCAATCACATACAAGGTTCTTGTCCGAGCTCTCTGGAGAGAAGGCAAGATCGAAGAAGCTGTTGAAGCAGTCAGAGATATGGAACAAAAGGGAGTTATAGGAACGGGTTCAGTTTACTATGAATTGGCATGCTGTCTGTGCAACAACGGGCGTTGGTGCGATGCAATGCTCGAAGTGGGGAGGATGAAAAGACTTGAAAATTGCAGGCCGCTCGAGATTACCTTCACAGGACTCATAGCCGCTTCATTGAACGGTGGTCATGTTGATGATTGCATGGCTATATTCCAATATATGAAAGATAAATGTGATCCGAATATAGGAACTGCGAACATGATGCTTAAAGTTTACGGAAGGAATGATATGTTTTCAGAAGCTAAAGAATTGTTTGAAGAGATTGTCAGCAGAAAAGAGACTCATTTAGTTCCAAACGAGTATACATACAGCTTCATGCTTGAAGCTTCAGCTAGATCACTGCAATGGGAATACTTTGAACATGTGTATCAAACGATGGTTCTTTCTGGTTACCAAATGGATCAAACAAAACATGCATCAATGCTGATAGAAGCATCAAGAGCCGGGAAGTGGAGTCTTCTAGAGCATGCCTTCGATGCAGTACTTGAAGATGGAGAAATCCCTCACCCATTGTTCTTCACTGAACTGTTGTGTCATGCCACAGCTAAAGGCGATTTCCAAAGAGCTATCACACTGATTAACACTGTGGCTCTCGCATCTTTCCAGATTAGTGAAGAAGAATGGACTGATCTTTTTGAGGAGCATCAAGACTGGCTTACTCAAGATAATCTTCATAAGCTCTCGGATCATCTCATTGAGTGTGATTATGTAAGTGAACCAACGGTCTCAAACCTCTCAAAGTCATTGAAATCTCGATGTGGGTCTTCTTCTTCTTCAGCACAACCATTGTTAGCCGTAGATGTAACAACTCAAAGTCAGGGCGAAAAACCGGAGGAAGATTTGCTTCTGCAAGATACAACAATGGAAGATGATAATAGTGCTAATGGTGAAGCTTGGGAATTTACAGAGACTGAACTCGAAACGTTGGGTCTAGAAGAACTCGAGATTGATGATGATGAAGAATCTAGCGACTCTGATTCACTTTCAGTTTATGACATTCTGAAAGAATGGGAAGAGAGTAGTAAGAAAGAATGAAAATGCTTGTAAATTTCCTCAAAATCTTTAGTAGAACAAAATCTCAATTTTTTTGCTTACTCA
CDS Sequence
Protein Sequence