Gene Details:
- Gene ID: AT5G67530
- Gene Symbol: ATPUB49, PUB49
- Gene Name: PLANT U-BOX 49, plant U-box 49
- Description: plant U-box 49;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Function-related keywords:
- shoot axis apex , plant embryo , stamen , sepal , flower , collective leaf structure , pollen , plant sperm cell
Literature:
- The Arabidopsis cyclophilin gene family. DOI: 10.1104/pp.103.022160 ; PMID: 15051864
- Immunophilins and parvulins. Superfamily of peptidyl prolyl isomerases in Arabidopsis. DOI: 10.1104/pp.103.031005 ; PMID: 15047905
- Structure and biochemical function of a prototypical Arabidopsis U-box domain. DOI: 10.1074/jbc.M405057200 ; PMID: 15231834
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Biochemical function of typical and variant Arabidopsis thaliana U-box E3 ubiquitin-protein ligases. DOI: 10.1042/BJ20071568 ; PMID: 18393940
- News from the PUB: plant U-box type E3 ubiquitin ligases. DOI: 10.1093/jxb/erx411 ; PMID: 29237060
Sequences:
cDNA Sequence
- >AT5G67530.1
AACAGGCCTTTTTAATATCCGGGTCGGACTCTATTAAGGCCGGATCTGGTTCTACGGCGGCGACTCCTCCTCCTGACTATAACAAAAACAAAACGCGGTGGGGAGGGCGGTAGTATCAGACAGATCGAAAATCGCAACGGTTAAGATTCCAGCTACTGAAATCTATCAACGTCGAAGAAGTGAACGATGGGGAAGAAACAACACAGCAAAGATCGGATGTTCATAACGAAGACGGAGTGGGCAACAGAATGGGGAGGCGCTAAATCCAAAGAGAATCGAACTCCTTTCAAGAGTCTTCCTTACTATTGCTGCGCGCTTACGTTTTTGCCATTCGAAGATCCTGTGTGTACAATCGACGGGAGTGTTTTCGAGATAACAACAATAGTGCCTTACATTAGGAAATTTGGAAAACATCCTGTTACTGGAGCTCCATTGAAAGGAGAAGATCTAATTCCTCTCATCTTTCACAAGAACTCTGAAGGAGAGTATCATTGTCCTGTTCTAAACAAAGTCTTCACTGAATTTACACATATTGTTGCTGTCAAGACTACTGGAAATGTATTCTGCTACGAGGCAATCAAAGAGTTGAATATCAAAACCAAGAATTGGAAGGAGCTTTTAACTGAAGAACCATTTACAAGAGCCGACCTTATAACAATTCAGAATCCTAATGCAGTTGATGGTAAAGTGACGGTGGAGTTTGATCATGTTAAAAACGGTCTTAAGATCGATGATGAAGAGTTGAAAAAGATGAACTCAGACCCTGCTTATAATATAAACGTGTCTGGAGATATCAAGCACATGCTTGCAGATCTTGGAACTGATAAAGCTAAAGAGATTGCTTTACATGGTGGAGGTGGAAACAAGGCACGTAATGAAAGAGCCGCTGCTATTGCTGCGATTCTGGAGTCAAGATCGAAAATCAAAGAGGTTTCTAAAGCAGAACAACCGAAACAGACCTACAGTGTTGTTGATGCTGCATCTGCTTCGGTTTTTGGAAGAAGTGCTGATGCAGCTAAAGCTGGTTCTAGTGATAAAACAGCTGCAAGAATAGCTATGCATATGGCTGGAGATAGAACACCTGTTAATTCTAAAATGGTGAAGAGCCGTTATTCGTCGGGTGCTGCTTCTCGTTCTTTCACTTCCTCTGCCTTTACTCCTGTAACCAAAAACGATTTTGAACTAATTAAAGTCGAGAAAAACCCGAAAAAGAAAGGGTATGTTCAGTTTCAGACAACACATGGCGATTTGAACATTGAGCTCCATTGCGATATAGCTCCTAGAGCATGTGAGAATTTCATCACTCTCTGTGAACGTGGTTACTACAATGGAGTGGCCTTTCACAGAAGTATCAGGAACTTCATGATTCAAGGGGGCGATCCAACTGGCACAGGAAAAGGAGGTGAATCCATTTGGGGGAAGCCATTCAAAGACGAGCCAAACTCGAAGCTGCTTCACTCAGGAAGAGGCGTAGTTAGTATGGCTAATAGTGGACCTCACACAAATGGTTCTCAGTTTTTCGTCTTATACAAATCAGCGACCCATTTAAACTACAAGCACACAGTGTTTGGTGGAGTTGTTGGTGGTTTGGCAACACTAGCAGCAATGGAGAATGTACCTGTAGATGAAAGCGACCGTCCTCTTGAAGAGATTAAGATAATCGAGGCAAGTGTGTTTGTGAATCCATACACGGAGCTTGATGAAGAGGAAGAGAAAGAGAAAGCTGAGAAAGAGAAGAATGAAGACAAAGACATTGAGAAGATCGGGTCGTGGTACAGCAACCCGGGATCAGGAACAACAGAAGCTGGAGCGGGTGGCGGTGGTGTCGGAAAATACTTGAAAGCTATGAGTAGTACAGCCACTAAAGACACTAAAGGTTCCCTAGACTCAGATATTTCAACCATTGGAGTGTCTAAGAAAAGAAAAACTACTGCGTCAGCCTCCACAGGGTTTAAAGATTTCTCTAGCTGGTAATTGAAAACATTCTCTACCTACTTTGTAAAACCGTTGACTAGTTTTGATAGAGACCAAGTCACAAAAGCATTTGTATGACAACACTGAGCCTTTGATGTCCAAAATCTGGAGCTGTGTAATAAAGTTGACTAGTTTTGATGGAGCCCAAAAGTCACAAAAGCATTTGTATAACAGCCCAAGTCACAAACGCATTTGTATAACATTGAACCTTTGATGTCCAAGAGCTGAGGCTGTATCTTCAGTAAAAAGATTTATTAAGTATAATCCT
CDS Sequence
Protein Sequence