Information report for AT5G44160
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000039 — shoot axis vascular system — sistema vascular del eje del epiblasto (epiblastema) (Spanish, exact), シュート軸維管系 (Japanese, exact), branch vascular system (narrow), stem vascular system (narrow)
- PO:0000045 — embryo root — embryonic root (exact), raíz embriónica (Spanish, exact), 初期の根、胚根 (Japanese, exact)
- PO:0006081 — primary root apical meristem — meristema apical de la raíz primaria (Spanish, exact), 一次根頂端分裂組織 (Japanese, exact), apical meristem of primary root (related), embryonic root meristem (related)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Conservation, diversification and expansion of C2H2 zinc finger proteins in the Arabidopsis thaliana genome. DOI: 10.1186/1471-2164-5-39 ; PMID: 15236668
- Whole-genome analysis of the SHORT-ROOT developmental pathway in Arabidopsis. DOI: 10.1371/journal.pbio.0040143 ; PMID: 16640459
- A C2H2-type zinc finger protein, SGR5, is involved in early events of gravitropism in Arabidopsis inflorescence stems. DOI: 10.1111/j.1365-313X.2006.02807.x ; PMID: 16813575
- The maize INDETERMINATE1 flowering time regulator defines a highly conserved zinc finger protein family in higher plants. DOI: 10.1186/1471-2164-7-158 ; PMID: 16784536
- Arabidopsis BIRD Zinc Finger Proteins Jointly Stabilize Tissue Boundaries by Confining the Cell Fate Regulator SHORT-ROOT and Contributing to Fate Specification. DOI: 10.1105/tpc.114.132407 ; PMID: 25829440
- Transcriptional control of tissue formation throughout root development. DOI: 10.1126/science.aad1171 ; PMID: 26494755
- Transcriptional Regulation of Arabidopsis Polycomb Repressive Complex 2 Coordinates Cell-Type Proliferation and Differentiation. DOI: 10.1105/tpc.15.00744 ; PMID: 27650334
- Elongator Is Required for Root Stem Cell Maintenance by Regulating SHORTROOT Transcription. DOI: 10.1104/pp.18.00534 ; PMID: 30401723
- Transcriptional regulation of nitrogen-associated metabolism and growth. DOI: 10.1038/s41586-018-0656-3 ; PMID: 30356219
- A PXY-Mediated Transcriptional Network Integrates Signaling Mechanisms to Control Vascular Development in Arabidopsis. DOI: 10.1105/tpc.19.00562 ; PMID: 31806676
- Gene Regulation via the Combination of Transcription Factors in the INDETERMINATE DOMAIN and GRAS Families. DOI: 10.3390/genes11060613 ; PMID: 32498388
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
Gene Resources
- UniProt: A0A654G8B9
- EMBL: CACRSJ010000110
- AlphaFoldDB: A0A654G8B9
- EnsemblPlants: AT5G44160.1
- Gramene: AT5G44160.1
- KEGG: ath:AT5G44160
- ExpressionAtlas: AT5G44160
- InterPro: IPR013087, IPR031140, IPR036236
- PANTHER: PTHR10593, PTHR10593:SF178
- SUPFAM: SSF57667
- PROSITE: PS00028, PS50157
- Gene3D: 3.30.160.60
Sequences
cDNA Sequence
- >AT5G44160.1
GCTAATATAGAGTGGTATAGGTTAAGACAAAAGCCATATATAAGTGGAGAACCCAATATATCTTTGTCTTTGTTGTTTTTTCCTTCTCGTTCATAGTTAACTTGCAGATTTCTTAGTATTTCTAATCTTTTTCTTATATTAACCTTTTGTCTCCTTCTCTCTCTCTCTCTCTCTGAACTATACAAAAACCTACTTTTAATTTCTCTTCCAAGAAGTCAAGAACCCAGAAGAAGACATGACAAGTGAAGTTCTTCAAACAATCTCAAGTGGATCAGGTTTTGCTCAGCCACAGAGCTCATCAACCCTGGATCATGATGAATCTCTCATCAATCCTCCTCTTGTTAAGAAAAAGAGAAATCTCCCTGGAAATCCTGATCCGGAAGCTGAAGTGATAGCTTTATCCCCCACGACCTTGATGGCTACGAACCGGTTCCTATGTGAGGTATGTGGCAAAGGTTTCCAAAGAGACCAAAACTTACAGCTTCATCGGCGAGGACATAATCTTCCATGGAAGTTGAAGCAGAGGACAAGCAAAGAAGTGAGAAAACGTGTCTACGTTTGCCCCGAGAAGACATGTGTCCACCATCACTCCTCTAGAGCTCTAGGCGATCTCACTGGAATCAAAAAGCATTTTTGCCGGAAACACGGGGAGAAGAAGTGGACGTGCGAGAAATGTGCTAAGAGATACGCAGTCCAATCTGATTGGAAAGCTCATTCCAAGACTTGTGGTACTAGAGAGTACCGTTGCGATTGTGGCACCATTTTCTCAAGGCGAGACAGCTTTATCACTCATAGAGCTTTCTGCGATGCCTTAGCGGAAGAAACCGCTAAGATAAACGCAGTGTCTCATCTCAACGGTTTAGCCGCGGCTGGAGCCCCAGGATCAGTTAATCTCAACTATCAATATCTCATGGGAACATTCATCCCACCGCTTCAACCATTTGTACCACAACCGCAAACAAATCCAAACCATCATCATCAACATTTTCAGCCACCAACTTCTTCGTCGCTCTCTCTATGGATGGGACAAGATATCGCGCCGCCTCAACCGCAACCGGACTACGATTGGGTTTTTGGAAACGCTAAGGCAGCGTCTGCTTGCATTGATAATAATAATACTCACGATGAGCAGATTACGCAAAACGCAAACGCAAGTTTGACCACTACCACTACTCTCTCTGCCCCTTCTTTATTCAGCAGCGACCAACCACAAAACGCAAACGCAAATTCAAACGTGAATATGTCCGCGACAGCTTTACTACAGAAAGCTGCTGAAATTGGCGCTACTTCTACAACAACCGCAGCGACCAATGACCCATCAACGTTTCTTCAAAGTTTCCCGCTTAAATCCACCGATCAAACCACCAGTTATGACAGTGGCGAAAAGTTTTTTGCTTTGTTCGGGTCTAACAACAACATTGGGTTAATGAGTCGTAGTCATGATCATCAAGAGATCGAGAACGCTAGAAATGACGTTACGGTTGCGTCTGCCTTGGATGAATTACAGAATTACCCTTGGAAACGTAGAAGAGTTGATGGTGGAGGTGAAGTGGGTGGAGGAGGGCAAACTCGGGATTTCCTCGGGGTTGGTGTACAAACGTTGTGCCATCCATCGTCTATCAATGGATGGATTTGAAAGAGTTTAAAAATTTCGGGGTTAATGCATAAATTACGTAAAAGAAGAAGGAATCTTTTGTCATTTCCACCATTTTCTAAGATAACATATGTATATGGTAATGGAAGTTGTTTTCTTTTATTAATTCAATATTCTAAAACTTATGATATATGTATAATGAATGTGTTTATCTTCAAGATATATGTCAATGACATTCACAAGACATTCATAATCTTTTGAATTTTTATCATACGGGA - >AT5G44160.2
GCTAATATAGAGTGGTATAGGTTAAGACAAAAGCCATATATAAGTGGAGAACCCAATATATCTTTGTCTTTGTTGTTTTTTCCTTCTCGTTCATAGTTAACTTGCAGATTTCTTAGTATTTCTAATCTTTTTCTTATATTAACCTTTTGTCTCCTTCTCTCTCTCTCTCTCTCTGAACTATACAAAAACCTACTTTTAATTTCTCTTCCAAGAAGTCAAGAACCCAGAAGAAGACATGACAAGTGAAGTTCTTCAAACAATCTCAAGTGGATCAGGTTTTGCTCAGCCACAGAGCTCATCAACCCTGGATCATGATGAATCTCTCATCAATCCTCCTCTTGTTAAGAAAAAGAGAAATCTCCCTGGAAATCCTGATCCGGAAGCTGAAGTGATAGCTTTATCCCCCACGACCTTGATGGCTACGAACCGGTTCCTATGTGAGGTATGTGGCAAAGGTTTCCAAAGAGACCAAAACTTACAGCTTCATCGGCGAGGACATAATCTTCCATGGAAGTTGAAGCAGAGGACAAGCAAAGAAGTGAGAAAACGTGTCTACGTTTGCCCCGAGAAGACATGTGTCCACCATCACTCCTCTAGAGCTCTAGGCGATCTCACTGGAATCAAAAAGCATTTTTGCCGGAAACACGGGGAGAAGAAGTGGACGTGCGAGAAATGTGCTAAGAGATACGCAGTCCAATCTGATTGGAAAGCTCATTCCAAGACTTGTGGTACTAGAGAGTACCGTTGCGATTGTGGCACCATTTTCTCAAGGCGAGACAGCTTTATCACTCATAGAGCTTTCTGCGATGCCTTAGCGGAAGAAACCGCTAAGATAAACGCAGTGTCTCATCTCAACGGTTTAGCCGCGGCTGGAGCCCCAGGATCAGTTAATCTCAACTATCAATATCTCATGGGAACATTCATCCCACCGCTTCAACCATTTGTACCACAACCGCAAACAAATCCAAACCATCATCATCAACATTTTCAGCCACCAACTTCTTCGTCGCTCTCTCTATGGATGGGACAAGATATCGCGCCGCCTCAACCGCAACCGGACTACGATTGGGTTTTTGGAAACGCTAAGGCAGCGTCTGCTTGCATTGATAATAATAATACTCACGATGAGCAGATTACGCAAAACGCAAACGCAAGTTTGACCACTACCACTACTCTCTCTGCCCCTTCTTTATTCAGCAGCGACCAACCACAAAACGCAAACGCAAATTCAAACGTGAATATGTCCGCGACAGCTTTACTACAGAAAGCTGCTGAAATTGGCGCTACTTCTACAACAACCGCAGCGACCAATGACCCATCAACGTTTCTTCAAAGTTTCCCGCTTAAATCCACCGATCAAACCACCAGTTATGACAGTGGCGAAAAGTTTTTTGCTTTGTTCGGGTCTAACAACAACATTGGGTTAATGAGTCGTAGTCATGATCATCAAGAGATCGAGAACGCTAGAAATGACGTTACGGTTGCGTCTGCCTTGGATGAATTACAGAATTACCCTTGGAAACGTAGAAGAGTTGATGGTGGAGGTGAAGTGGGTGGAGGAGGGCAAACTCGGGATTTCCTCGGGGTTGGTGTACAAACGTTGTGCCATCCATCGTCTATCAATGGATGGATTTGAAAGAGTTTAAAAATTTCGGGGTTAATGCATAAATTACGTAAAAGAAGAAGGAATCTTTTGTCATTTCCACCATTTTCTAAGATAACATATGTATATGGTAATGGAAGTTGTTTTCTTTTATTAATTCAATATTCTAAAACTTATGATATATGTATAATGAATGTGTTTATCTTCAAGATATATGTCAATGACATTCACAAGACATTCATAATCTTTTGAATTTTTATCATACGGGA
CDS Sequence
Protein Sequence